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The map label for this gene is phoD [H]

Identifier: 68536369

GI number: 68536369

Start: 1515810

End: 1517504

Strand: Direct

Name: phoD [H]

Synonym: jk1287

Alternate gene names: 68536369

Gene position: 1515810-1517504 (Clockwise)

Preceding gene: 68536367

Following gene: 68536371

Centisome position: 61.56

GC content: 63.83

Gene sequence:

>1695_bases
ATGACGAATCGCAGTGCTAATCCACAACTCCCTAATTCCTCAACCCCTTCCCACCCCTCAACTCCTTCCAACTCCCGTAG
CACCACCCGCCGCACGTTTCTCGCCGGTGCCAGCGCCACCGGTGCCGCGCTGCTGGGCACAGGTGCAGCGCACGCTCTCG
GCTCGCATGCCGGCAGCGTGGCTGGCTCCGCTGCCGGATCGTCGGTAGGTTCCAGCGGGGCAATCGGTTCGATTGGGTTA
CAGCGCGCCCGGCCGGTGATCACTCATGGCGTCGCTACCGGCGATGTGCGACCCGACGGCGCCCTCGTATGGGCGCGCGT
CGATCGACCGGCGCGCATGGTCGTAGAAGCATCAACGGACCCAGCGTTTCCGCGACACAAGACCAAGACTTTCCGCGGCG
CCACGCTCACCCCGGATAGCGACGGCACCGGGCGGCTACGCCTGGTCGGCATGGAACCGGGCCAGAAGATCCACTACCGA
GTGACCATGGAGGATCAGCACACTGCCGCGCGTTCCGTGCCGGTGATCGGCAGCTTCACTACCGCCCCTTCCACCAGCCA
GGCGCCGAAGAACATCCGCCTGCACTGGTCCGGCGACGTGGCGGGCCAGGGCTACGGCATCAACCCGGACATCGGCGGCA
TGTACTGCTGGAAGACGATGGCAGACCGCAACCCGGACCTGTTTATCCACTCCGGCGATACGGTCTACGCCGACGGGCCA
ATCGAGGCGAACCACAAGATGGACGACGGCCGAGTGTTTAAGAACCTCACCAGCCCGTACAAGAACAAGGTCGCCGAGAC
TCTGGAGGAGTTCCGCGGCCAGCACGCCTACAACCTGCTGGACGAAAACTACAAGCGCTTCAACTCTCAGGTAGCGCAGG
TAGTGCAGTGGGATGACCACGAGACGACGAACAACTGGTATCCCGGCGAGATCCTGGAGGACGACAAGTACCAGGTCAAG
GACGTGAACCTTCTGGCCCAGCGCGGATTCCAGGCCTTCCACGAGTGGCAGCCTCTGGACCGGAAGATGGCCGTGGATGG
CCGCGTGTACCGCAAGATCTCCTATGGTTCCCTGCTGGACATCTTCGTGCTGGATATGCGCAGCTACAAGGATCGCAATC
CGGACAGCGGAGCTTCTGCCACCAAGCCGGGACAGATCCTGGGAGAAAAGCAGGCAAAATGGCTGGTCGAGGGAGTAAAG
AACTCCACCGCCACGTGGAAGATCATCGCCAACGACCTGCCACTGGGCATCGTGGTGCCGGACGGGGACGACCAGGAGGG
CGTATCCAACGGCAAGGGTGGAAAGGCCGTCGGCCGCGAGGCGGAGATCGGGCGCGTGCTCAGCGGCATCAAGGACGTGC
GCAACGTGGTGTGGCTGACGGCTGACGTGCACTACACCGCCGCCCACCACTACTCGCCGGATCGTGCGGACTTCCAGGAT
TTCGCGCCGTTCTGGGAGTTCGTCACCGGCCCGCTGAACGCCGGCGGCTTCGGTCCGAACGACATGGACGGCACCTTCGG
CCCGGAGGTCGTGTACGTGCACGCCCCGGCGAAGGATAAGCAAAACTCCTCGCCGCTGGATGATTTCCAGCACTTCGGAG
AGGTGGACATCGACGGCGGGTCGAAGGACCTCACCGTCCGGCTGTTCACCACCCGTGGCAAGGAGCTGTGGTCAAAGACG
CTGCGCGCACAGTAG

Upstream 100 bases:

>100_bases
CCCTTTCTCCCCGCCCATTAACCATGAATTTAATTTCACGTAATCCGCGATTTACGCGCTTGCCACGGCTGCGACAGGTT
TGGCCGATAGCTTGGCCGCT

Downstream 100 bases:

>100_bases
TCACAAGCTATAGGCGTGGTAGCAGGGCGCACCGCGAGCGGGCGCAGGCTGCCACCAGTTAGTCGTCGGCCTACTTGAGG
TTTGCGACCACGCGGTCGCC

Product: putative phosphodiesterase/alkaline phosphatase D

Products: NA

Alternate protein names: APaseD [H]

Number of amino acids: Translated: 564; Mature: 563

Protein sequence:

>564_residues
MTNRSANPQLPNSSTPSHPSTPSNSRSTTRRTFLAGASATGAALLGTGAAHALGSHAGSVAGSAAGSSVGSSGAIGSIGL
QRARPVITHGVATGDVRPDGALVWARVDRPARMVVEASTDPAFPRHKTKTFRGATLTPDSDGTGRLRLVGMEPGQKIHYR
VTMEDQHTAARSVPVIGSFTTAPSTSQAPKNIRLHWSGDVAGQGYGINPDIGGMYCWKTMADRNPDLFIHSGDTVYADGP
IEANHKMDDGRVFKNLTSPYKNKVAETLEEFRGQHAYNLLDENYKRFNSQVAQVVQWDDHETTNNWYPGEILEDDKYQVK
DVNLLAQRGFQAFHEWQPLDRKMAVDGRVYRKISYGSLLDIFVLDMRSYKDRNPDSGASATKPGQILGEKQAKWLVEGVK
NSTATWKIIANDLPLGIVVPDGDDQEGVSNGKGGKAVGREAEIGRVLSGIKDVRNVVWLTADVHYTAAHHYSPDRADFQD
FAPFWEFVTGPLNAGGFGPNDMDGTFGPEVVYVHAPAKDKQNSSPLDDFQHFGEVDIDGGSKDLTVRLFTTRGKELWSKT
LRAQ

Sequences:

>Translated_564_residues
MTNRSANPQLPNSSTPSHPSTPSNSRSTTRRTFLAGASATGAALLGTGAAHALGSHAGSVAGSAAGSSVGSSGAIGSIGL
QRARPVITHGVATGDVRPDGALVWARVDRPARMVVEASTDPAFPRHKTKTFRGATLTPDSDGTGRLRLVGMEPGQKIHYR
VTMEDQHTAARSVPVIGSFTTAPSTSQAPKNIRLHWSGDVAGQGYGINPDIGGMYCWKTMADRNPDLFIHSGDTVYADGP
IEANHKMDDGRVFKNLTSPYKNKVAETLEEFRGQHAYNLLDENYKRFNSQVAQVVQWDDHETTNNWYPGEILEDDKYQVK
DVNLLAQRGFQAFHEWQPLDRKMAVDGRVYRKISYGSLLDIFVLDMRSYKDRNPDSGASATKPGQILGEKQAKWLVEGVK
NSTATWKIIANDLPLGIVVPDGDDQEGVSNGKGGKAVGREAEIGRVLSGIKDVRNVVWLTADVHYTAAHHYSPDRADFQD
FAPFWEFVTGPLNAGGFGPNDMDGTFGPEVVYVHAPAKDKQNSSPLDDFQHFGEVDIDGGSKDLTVRLFTTRGKELWSKT
LRAQ
>Mature_563_residues
TNRSANPQLPNSSTPSHPSTPSNSRSTTRRTFLAGASATGAALLGTGAAHALGSHAGSVAGSAAGSSVGSSGAIGSIGLQ
RARPVITHGVATGDVRPDGALVWARVDRPARMVVEASTDPAFPRHKTKTFRGATLTPDSDGTGRLRLVGMEPGQKIHYRV
TMEDQHTAARSVPVIGSFTTAPSTSQAPKNIRLHWSGDVAGQGYGINPDIGGMYCWKTMADRNPDLFIHSGDTVYADGPI
EANHKMDDGRVFKNLTSPYKNKVAETLEEFRGQHAYNLLDENYKRFNSQVAQVVQWDDHETTNNWYPGEILEDDKYQVKD
VNLLAQRGFQAFHEWQPLDRKMAVDGRVYRKISYGSLLDIFVLDMRSYKDRNPDSGASATKPGQILGEKQAKWLVEGVKN
STATWKIIANDLPLGIVVPDGDDQEGVSNGKGGKAVGREAEIGRVLSGIKDVRNVVWLTADVHYTAAHHYSPDRADFQDF
APFWEFVTGPLNAGGFGPNDMDGTFGPEVVYVHAPAKDKQNSSPLDDFQHFGEVDIDGGSKDLTVRLFTTRGKELWSKTL
RAQ

Specific function: Unknown

COG id: COG3540

COG function: function code P; Phosphodiesterase/alkaline phosphatase D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PhoD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018946
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09423 PhoD [H]

EC number: =3.1.3.1 [H]

Molecular weight: Translated: 61271; Mature: 61140

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNRSANPQLPNSSTPSHPSTPSNSRSTTRRTFLAGASATGAALLGTGAAHALGSHAGSV
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEEECCCCCCCCEECCCHHHHHHCCCCCC
AGSAAGSSVGSSGAIGSIGLQRARPVITHGVATGDVRPDGALVWARVDRPARMVVEASTD
CCCCCCCCCCCCCCCCHHHHHHCCCCCEECCEECCCCCCCEEEEEECCCCEEEEEECCCC
PAFPRHKTKTFRGATLTPDSDGTGRLRLVGMEPGQKIHYRVTMEDQHTAARSVPVIGSFT
CCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCEEEEEEEECCCCHHHHCCCCEECCC
TAPSTSQAPKNIRLHWSGDVAGQGYGINPDIGGMYCWKTMADRNPDLFIHSGDTVYADGP
CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEHHHCCCCCCEEEECCCEEEECCC
IEANHKMDDGRVFKNLTSPYKNKVAETLEEFRGQHAYNLLDENYKRFNSQVAQVVQWDDH
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
ETTNNWYPGEILEDDKYQVKDVNLLAQRGFQAFHEWQPLDRKMAVDGRVYRKISYGSLLD
CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCEECCCEEEEEECCCCHHH
IFVLDMRSYKDRNPDSGASATKPGQILGEKQAKWLVEGVKNSTATWKIIANDLPLGIVVP
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEC
DGDDQEGVSNGKGGKAVGREAEIGRVLSGIKDVRNVVWLTADVHYTAAHHYSPDRADFQD
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCCCCCCCHHH
FAPFWEFVTGPLNAGGFGPNDMDGTFGPEVVYVHAPAKDKQNSSPLDDFQHFGEVDIDGG
HHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCEEECCC
SKDLTVRLFTTRGKELWSKTLRAQ
CCEEEEEEEECCCHHHHHHHHCCC
>Mature Secondary Structure 
TNRSANPQLPNSSTPSHPSTPSNSRSTTRRTFLAGASATGAALLGTGAAHALGSHAGSV
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEEECCCCCCCCEECCCHHHHHHCCCCCC
AGSAAGSSVGSSGAIGSIGLQRARPVITHGVATGDVRPDGALVWARVDRPARMVVEASTD
CCCCCCCCCCCCCCCCHHHHHHCCCCCEECCEECCCCCCCEEEEEECCCCEEEEEECCCC
PAFPRHKTKTFRGATLTPDSDGTGRLRLVGMEPGQKIHYRVTMEDQHTAARSVPVIGSFT
CCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCEEEEEEEECCCCHHHHCCCCEECCC
TAPSTSQAPKNIRLHWSGDVAGQGYGINPDIGGMYCWKTMADRNPDLFIHSGDTVYADGP
CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEHHHCCCCCCEEEECCCEEEECCC
IEANHKMDDGRVFKNLTSPYKNKVAETLEEFRGQHAYNLLDENYKRFNSQVAQVVQWDDH
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
ETTNNWYPGEILEDDKYQVKDVNLLAQRGFQAFHEWQPLDRKMAVDGRVYRKISYGSLLD
CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCEECCCEEEEEECCCCHHH
IFVLDMRSYKDRNPDSGASATKPGQILGEKQAKWLVEGVKNSTATWKIIANDLPLGIVVP
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEC
DGDDQEGVSNGKGGKAVGREAEIGRVLSGIKDVRNVVWLTADVHYTAAHHYSPDRADFQD
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCCCCCCCHHH
FAPFWEFVTGPLNAGGFGPNDMDGTFGPEVVYVHAPAKDKQNSSPLDDFQHFGEVDIDGG
HHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCEEECCC
SKDLTVRLFTTRGKELWSKTLRAQ
CCEEEEEEEECCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760916; 9384377; 7704254; 25878 [H]