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The map label for this gene is yjfH [C]

Identifier: 68535492

GI number: 68535492

Start: 506468

End: 507388

Strand: Direct

Name: yjfH [C]

Synonym: jk0422

Alternate gene names: 68535492

Gene position: 506468-507388 (Clockwise)

Preceding gene: 68535491

Following gene: 68535496

Centisome position: 20.57

GC content: 64.17

Gene sequence:

>921_bases
ATGGCCATTTTTTCGCCCATCCGGATCGATGACCCGCGTGACTCGCGCCTGGACGACTTTCGGAACCTCAACGCCTCCGA
CAAGAAGTCCGGCGAGCAGCTGATTATCGCCGAGGGTACCTTGGTTGTCCCGCGCCTGCTGGCTAGCCCTTATCCGACCC
GCGCGGTCGTGGGGTTCCCGGGGAAGCTGCGGGCGATCGAAGCGGAGCTGTCTCGCTCTCTTTCTAGTGATGACGCCAAC
TTTTCCGTGTTCGAGGTTTCCCGCGAGGTCTTAAAGGAAGTCGCGGGTTTCGATATGCATAGGGGACTAGTTGCGTCGGC
GGATCGGCTGCCTGTGAACCCCGTGAGCCCTGTGGGCTCTGTGAGCACAGCGAGCACTGGGGATCCGGCCGGCACAGGGG
CGAGTGCCGTGGAGGCAGTGCTGGACCACTTGGAGGAAGCCGCCGACACCAGCGGAGTGATCGCCGTGCTAGAGGGAGTG
GGGGATCACGAGAATATCGGCTCCATTTTCCGAAACGCTGCGGGGCTCAACGTTGATGCCGTGTTGTTTGGCGCGGCCAC
TGCCGACCCTCTGTACCGACGCAGCGTGCGCGTTTCCATGGGTCATGTACTGCGCCTTCCGTGGGCGAGGTTTCCCGGAA
CGACGACAACCTGGCAGCGGGACCTGGAGTTGCTACAGAGGCGTGGCTACGAGGTCGTGGCACTCACGCCGGCGGGGGAT
ACCACGCTTCGCGAGGCTACGGAGGCGGCCCGCATGCGCGGGAGGAAAGTGGCGGTGATGGTCGGTGCCGAAGGGCCCGG
ACTGACGGAGCACGCCATGCGTGCCGCGGATGTGCGCGCCAGTATCCCGATGGCCCGGGGTACTGACTCGCTGAACGTGG
CTACAGCGGCAGCCATCGCCTTCTACGAAGCAGTCCGCTAG

Upstream 100 bases:

>100_bases
GTCGTGCGAAGAAGGTCCACCCGCTGTTGTACTTGGTGGCTGTGATGTTCGTGGTCTACTTCGCCGCTGATCCGGTGATG
GATCTGCTGCGAGGCTAGCA

Downstream 100 bases:

>100_bases
GCGGGTTTACTTCCCGCGGCTGCGGCGGCGTACCTCGTCGCCGATCTTCTGGGAAGCCCCGCGTAGCCCCTTCCGCCCAG
CGGAAAGCCCCTTGCGTGCC

Product: putative rRNA methylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MAIFSPIRIDDPRDSRLDDFRNLNASDKKSGEQLIIAEGTLVVPRLLASPYPTRAVVGFPGKLRAIEAELSRSLSSDDAN
FSVFEVSREVLKEVAGFDMHRGLVASADRLPVNPVSPVGSVSTASTGDPAGTGASAVEAVLDHLEEAADTSGVIAVLEGV
GDHENIGSIFRNAAGLNVDAVLFGAATADPLYRRSVRVSMGHVLRLPWARFPGTTTTWQRDLELLQRRGYEVVALTPAGD
TTLREATEAARMRGRKVAVMVGAEGPGLTEHAMRAADVRASIPMARGTDSLNVATAAAIAFYEAVR

Sequences:

>Translated_306_residues
MAIFSPIRIDDPRDSRLDDFRNLNASDKKSGEQLIIAEGTLVVPRLLASPYPTRAVVGFPGKLRAIEAELSRSLSSDDAN
FSVFEVSREVLKEVAGFDMHRGLVASADRLPVNPVSPVGSVSTASTGDPAGTGASAVEAVLDHLEEAADTSGVIAVLEGV
GDHENIGSIFRNAAGLNVDAVLFGAATADPLYRRSVRVSMGHVLRLPWARFPGTTTTWQRDLELLQRRGYEVVALTPAGD
TTLREATEAARMRGRKVAVMVGAEGPGLTEHAMRAADVRASIPMARGTDSLNVATAAAIAFYEAVR
>Mature_305_residues
AIFSPIRIDDPRDSRLDDFRNLNASDKKSGEQLIIAEGTLVVPRLLASPYPTRAVVGFPGKLRAIEAELSRSLSSDDANF
SVFEVSREVLKEVAGFDMHRGLVASADRLPVNPVSPVGSVSTASTGDPAGTGASAVEAVLDHLEEAADTSGVIAVLEGVG
DHENIGSIFRNAAGLNVDAVLFGAATADPLYRRSVRVSMGHVLRLPWARFPGTTTTWQRDLELLQRRGYEVVALTPAGDT
TLREATEAARMRGRKVAVMVGAEGPGLTEHAMRAADVRASIPMARGTDSLNVATAAAIAFYEAVR

Specific function: Unknown

COG id: COG0566

COG function: function code J; rRNA methylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase TrmH family [H]

Homologues:

Organism=Escherichia coli, GI1790623, Length=153, Percent_Identity=32.0261437908497, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001537 [H]

Pfam domain/function: PF00588 SpoU_methylase [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 32489; Mature: 32358

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIFSPIRIDDPRDSRLDDFRNLNASDKKSGEQLIIAEGTLVVPRLLASPYPTRAVVGFP
CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCCCEEEECC
GKLRAIEAELSRSLSSDDANFSVFEVSREVLKEVAGFDMHRGLVASADRLPVNPVSPVGS
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHCCHHHCCCCCCCCCCCCCCC
VSTASTGDPAGTGASAVEAVLDHLEEAADTSGVIAVLEGVGDHENIGSIFRNAAGLNVDA
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEE
VLFGAATADPLYRRSVRVSMGHVLRLPWARFPGTTTTWQRDLELLQRRGYEVVALTPAGD
EEEECCCCCHHHHHHHHHHHHHHEECCCHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCC
TTLREATEAARMRGRKVAVMVGAEGPGLTEHAMRAADVRASIPMARGTDSLNVATAAAIA
HHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
FYEAVR
HHHHCC
>Mature Secondary Structure 
AIFSPIRIDDPRDSRLDDFRNLNASDKKSGEQLIIAEGTLVVPRLLASPYPTRAVVGFP
CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCCCEEEECC
GKLRAIEAELSRSLSSDDANFSVFEVSREVLKEVAGFDMHRGLVASADRLPVNPVSPVGS
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHCCHHHCCCCCCCCCCCCCCC
VSTASTGDPAGTGASAVEAVLDHLEEAADTSGVIAVLEGVGDHENIGSIFRNAAGLNVDA
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEE
VLFGAATADPLYRRSVRVSMGHVLRLPWARFPGTTTTWQRDLELLQRRGYEVVALTPAGD
EEEECCCCCHHHHHHHHHHHHHHEECCCHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCC
TTLREATEAARMRGRKVAVMVGAEGPGLTEHAMRAADVRASIPMARGTDSLNVATAAAIA
HHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
FYEAVR
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]