| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
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The map label for this gene is mesJ [H]
Identifier: 68535341
GI number: 68535341
Start: 339560
End: 340612
Strand: Direct
Name: mesJ [H]
Synonym: jk0276
Alternate gene names: 68535341
Gene position: 339560-340612 (Clockwise)
Preceding gene: 68535340
Following gene: 68535342
Centisome position: 13.79
GC content: 69.52
Gene sequence:
>1053_bases ATGAGTGTTCAGTCGCAGATCCGGGCCTGGCTGCGAGAGCTGGAAACCGGGGAAGCCAGCGGCGGCGGAACCAGTGAAAC CAGCCCCGAGTCCGCAGCGCGCGCGGCACAGGTTCGCGCCGGGGTGGCAGCGGGACTTTCCGGCGGGGCGGACTCCCTGG CACTGGTGCACGGCCTGCTGCGCTGCGGGGTGAAGGTACACGCGGTAGTGGTGGACCATCAGCTGCAGGAAGGCTCCGCG CAGGTGGCGCGGCAGGCCGCGGATACCGCACTGTCCCTAGGCGCGACGGCGGAGATCCGCACCGTCGACGTGGAAGGCCC AGGGGAGGGCCCGGCGCGCCAGGCGCGCTATGAAGCCCTGGGCGCGGCGGCCGCCGGGCGGCCGCTCCTGGTAGCTCACA CGGCGGATGACGACGCAGAAGGGATGCTCATCGGTCTGGTCCGCGGCTCCGGGGCGGAAGCTATCGCCGGGATGCGATCT GTGCACACCGACCACGCGGCCGTGGCCGCGGGGGCCGCGTGGCTCGGCCGTCCGCTGCTGAACTGCACCCGCGCGGAGAC AGAGGCCGAATGCCGCGCCGCCGGTCTTAACTGGTGGGAGGATCCGCACAACTCCAGCGATGCCTACCTGCGCAGCCGCA TCCGCACCCACGTGCTGCCGTACCTGGAAGATGTGCTCGGGGAGCACATCGGTGCGAACATGGCCCGCACCGCGCGGATG CTTCGCGAAGACGTCGAGCTGCTCGACGAGCTCGCTGGGCGGGAGCTTCAGGCGGCGGAGGAGGGGGCGTCATTAAACTG CACCGAACTACAACAGCAACCAGCGGCACTGCGGCGCAGGGTGCTCAAACAATGGCTGGCAGATAAGGCCGGCCCCCTCA CGAGCGCGCACCTCAACGCGATAGACGCGCTGGTCATCGCATGGAAGGGGCAAGGAGGGGCGGCCGTGCCGTGGCCGCAG AGCCCACCTGCATTGAACGAGCAACGGCGCACCCACCGACTCGTCGTGCAACGCCGCGATGGTTACCTACAGTTAGCGAC TGTCCCCAGGTAG
Upstream 100 bases:
>100_bases AGCGCTGACGTTTGCGTTCCTCTCCAATGAGTCCGATCCCAACTCCGCCCGCCCGGCGCTGGATCGGTTGGCGAATGCGG TGCGTTCAGCCGAGTAAGCC
Downstream 100 bases:
>100_bases CAGCTGCGCGCTAGAATGCCAGGCAGGCACAAAACGGCGAAGCCAATGCAGCGGAGCCAAGACAGCGAAGCCACACTGCG AAAGCACTGCAAAACAAACG
Product: cell cycle protein MesJ
Products: NA
Alternate protein names: tRNA(Ile)-2-lysyl-cytidine synthase; tRNA(Ile)-lysidine synthetase [H]
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MSVQSQIRAWLRELETGEASGGGTSETSPESAARAAQVRAGVAAGLSGGADSLALVHGLLRCGVKVHAVVVDHQLQEGSA QVARQAADTALSLGATAEIRTVDVEGPGEGPARQARYEALGAAAAGRPLLVAHTADDDAEGMLIGLVRGSGAEAIAGMRS VHTDHAAVAAGAAWLGRPLLNCTRAETEAECRAAGLNWWEDPHNSSDAYLRSRIRTHVLPYLEDVLGEHIGANMARTARM LREDVELLDELAGRELQAAEEGASLNCTELQQQPAALRRRVLKQWLADKAGPLTSAHLNAIDALVIAWKGQGGAAVPWPQ SPPALNEQRRTHRLVVQRRDGYLQLATVPR
Sequences:
>Translated_350_residues MSVQSQIRAWLRELETGEASGGGTSETSPESAARAAQVRAGVAAGLSGGADSLALVHGLLRCGVKVHAVVVDHQLQEGSA QVARQAADTALSLGATAEIRTVDVEGPGEGPARQARYEALGAAAAGRPLLVAHTADDDAEGMLIGLVRGSGAEAIAGMRS VHTDHAAVAAGAAWLGRPLLNCTRAETEAECRAAGLNWWEDPHNSSDAYLRSRIRTHVLPYLEDVLGEHIGANMARTARM LREDVELLDELAGRELQAAEEGASLNCTELQQQPAALRRRVLKQWLADKAGPLTSAHLNAIDALVIAWKGQGGAAVPWPQ SPPALNEQRRTHRLVVQRRDGYLQLATVPR >Mature_349_residues SVQSQIRAWLRELETGEASGGGTSETSPESAARAAQVRAGVAAGLSGGADSLALVHGLLRCGVKVHAVVVDHQLQEGSAQ VARQAADTALSLGATAEIRTVDVEGPGEGPARQARYEALGAAAAGRPLLVAHTADDDAEGMLIGLVRGSGAEAIAGMRSV HTDHAAVAAGAAWLGRPLLNCTRAETEAECRAAGLNWWEDPHNSSDAYLRSRIRTHVLPYLEDVLGEHIGANMARTARML REDVELLDELAGRELQAAEEGASLNCTELQQQPAALRRRVLKQWLADKAGPLTSAHLNAIDALVIAWKGQGGAAVPWPQS PPALNEQRRTHRLVVQRRDGYLQLATVPR
Specific function: Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionin
COG id: COG0037
COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tRNA(Ile)-lysidine synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786386, Length=278, Percent_Identity=29.8561151079137, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012094 - InterPro: IPR012795 - InterPro: IPR015262 - InterPro: IPR014729 - InterPro: IPR011063 [H]
Pfam domain/function: PF01171 ATP_bind_3; PF09179 DUF1946 [H]
EC number: NA
Molecular weight: Translated: 37011; Mature: 36880
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVQSQIRAWLRELETGEASGGGTSETSPESAARAAQVRAGVAAGLSGGADSLALVHGLL CCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH RCGVKVHAVVVDHQLQEGSAQVARQAADTALSLGATAEIRTVDVEGPGEGPARQARYEAL HCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHH GAAAAGRPLLVAHTADDDAEGMLIGLVRGSGAEAIAGMRSVHTDHAAVAAGAAWLGRPLL HHHHCCCCEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHH NCTRAETEAECRAAGLNWWEDPHNSSDAYLRSRIRTHVLPYLEDVLGEHIGANMARTARM HHHHCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LREDVELLDELAGRELQAAEEGASLNCTELQQQPAALRRRVLKQWLADKAGPLTSAHLNA HHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH IDALVIAWKGQGGAAVPWPQSPPALNEQRRTHRLVVQRRDGYLQLATVPR HEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCEEEEEECCC >Mature Secondary Structure SVQSQIRAWLRELETGEASGGGTSETSPESAARAAQVRAGVAAGLSGGADSLALVHGLL CHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH RCGVKVHAVVVDHQLQEGSAQVARQAADTALSLGATAEIRTVDVEGPGEGPARQARYEAL HCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHH GAAAAGRPLLVAHTADDDAEGMLIGLVRGSGAEAIAGMRSVHTDHAAVAAGAAWLGRPLL HHHHCCCCEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHH NCTRAETEAECRAAGLNWWEDPHNSSDAYLRSRIRTHVLPYLEDVLGEHIGANMARTARM HHHHCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LREDVELLDELAGRELQAAEEGASLNCTELQQQPAALRRRVLKQWLADKAGPLTSAHLNA HHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH IDALVIAWKGQGGAAVPWPQSPPALNEQRRTHRLVVQRRDGYLQLATVPR HEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA