| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is yaiI [C]
Identifier: 66768148
GI number: 66768148
Start: 2220804
End: 2221286
Strand: Reverse
Name: yaiI [C]
Synonym: XC_1827
Alternate gene names: 66768148
Gene position: 2221286-2220804 (Counterclockwise)
Preceding gene: 66768151
Following gene: 66768147
Centisome position: 43.14
GC content: 70.6
Gene sequence:
>483_bases ATGAATACGCCACTCCCGCCAGGTCTTGCGCAGATCTGGGTCGACGCCGACGCCTGCCCGGCGGTCATTCGCGACATTTT GTTCCGCGCCGCCCAGCGCACCGGCATCCCTGTCACCTTGGTCGCCAACCACTTCCTGCGCACGCCAACCCTGGCCCATG TGCGGGCGCTGCAGGTGCCCGGCGGCCCGGATGCGGCCGATGACGCCATTGCCGAGCGGGTCAACGCTGGCGATCTGGTA GTGACCCAGGACATTCCTTTGGCGGCGCGCGTACTGGAACGCGGCGCCGCAGCGGTCAGTCCGCGCGGGGAGCCGTTCAG CAGCGACAGCATCGCCGAGCGCCTGTCGGTGCGCGGCTTTCTGGAAGAATTGCGCGGCGCCGGCGTGGCCACCGGCGGGC CGCCTGCGCTGCACGCACGCGACCGCCAGGCGTTCGCGGCACAGCTGGACCGCTGGCTGGCACGGCAATCCGCCCGGTCA TGA
Upstream 100 bases:
>100_bases GTACTCGTGTTTTATGCAAAAAGCGACACCTTCGGACAAAACTTTTGCTGTCAGGCGCATTCTGACCCCCCGTCAGGCCA TTTCCCTCCCGATTTCCTAG
Downstream 100 bases:
>100_bases AGACCCTCGCGCGGAGCCCGCAGGCGTATCATGACCGCCCTTTGCAACTGGTTTCCCGATGGCTCTCACCGCCACCGTCC GCAGGGCGGAACTGCAGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MNTPLPPGLAQIWVDADACPAVIRDILFRAAQRTGIPVTLVANHFLRTPTLAHVRALQVPGGPDAADDAIAERVNAGDLV VTQDIPLAARVLERGAAAVSPRGEPFSSDSIAERLSVRGFLEELRGAGVATGGPPALHARDRQAFAAQLDRWLARQSARS
Sequences:
>Translated_160_residues MNTPLPPGLAQIWVDADACPAVIRDILFRAAQRTGIPVTLVANHFLRTPTLAHVRALQVPGGPDAADDAIAERVNAGDLV VTQDIPLAARVLERGAAAVSPRGEPFSSDSIAERLSVRGFLEELRGAGVATGGPPALHARDRQAFAAQLDRWLARQSARS >Mature_160_residues MNTPLPPGLAQIWVDADACPAVIRDILFRAAQRTGIPVTLVANHFLRTPTLAHVRALQVPGGPDAADDAIAERVNAGDLV VTQDIPLAARVLERGAAAVSPRGEPFSSDSIAERLSVRGFLEELRGAGVATGGPPALHARDRQAFAAQLDRWLARQSARS
Specific function: Unknown
COG id: COG1671
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0178 family
Homologues:
Organism=Escherichia coli, GI87081732, Length=141, Percent_Identity=55.3191489361702, Blast_Score=166, Evalue=7e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1827_XANC8 (Q4UVN3)
Other databases:
- EMBL: CP000050 - RefSeq: YP_242910.1 - STRING: Q4UVN3 - GeneID: 3380374 - GenomeReviews: CP000050_GR - KEGG: xcb:XC_1827 - eggNOG: COG1671 - HOGENOM: HBG363074 - OMA: PLASRCV - PhylomeDB: Q4UVN3 - ProtClustDB: CLSK451485 - BioCyc: XCAM314565:XC_1827-MONOMER - HAMAP: MF_00489 - InterPro: IPR003791
Pfam domain/function: PF02639 DUF188
EC number: NA
Molecular weight: Translated: 16924; Mature: 16924
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTPLPPGLAQIWVDADACPAVIRDILFRAAQRTGIPVTLVANHFLRTPTLAHVRALQVP CCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHEEEECC GGPDAADDAIAERVNAGDLVVTQDIPLAARVLERGAAAVSPRGEPFSSDSIAERLSVRGF CCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH LEELRGAGVATGGPPALHARDRQAFAAQLDRWLARQSARS HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNTPLPPGLAQIWVDADACPAVIRDILFRAAQRTGIPVTLVANHFLRTPTLAHVRALQVP CCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHEEEECC GGPDAADDAIAERVNAGDLVVTQDIPLAARVLERGAAAVSPRGEPFSSDSIAERLSVRGF CCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH LEELRGAGVATGGPPALHARDRQAFAAQLDRWLARQSARS HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA