| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is yhjX [H]
Identifier: 66768081
GI number: 66768081
Start: 2138928
End: 2140607
Strand: Direct
Name: yhjX [H]
Synonym: XC_1760
Alternate gene names: 66768081
Gene position: 2138928-2140607 (Clockwise)
Preceding gene: 66768074
Following gene: 66768082
Centisome position: 41.54
GC content: 65.95
Gene sequence:
>1680_bases ATGACGCAAGGGTCCACCGTGGCGAACGCCAACGGCGCAGATGCCGGTTTGTTGTCCAAGGAGCGCATTGTGGCGCGGCC TGGTTTTAATCGTTGGTTGGTGCCGCCGGCTGCCTTGGCGATTCATTTGTGCATCGGCATGGCCTACGGGTTCAGCGTGT TCTGGCTGCCGTTGTCCAAGGCGCTGGGCATCACCGAATCGATCGCCTGCCCGGCCGACATGGGCCTGTTCGCGCGCATG GTGGCCACCACCTGCGACTGGAAGATCAGCGAACTGCAGTGGATGTACACGTTGTTCTTCGTGCTGCTGGGCTGTTCGGC CGCGATCTGGGGCGGCTGGCTCGAACGCGCCGGCCCGCGCAAGGCCGGCGTGGTCTCGGCACTGTGCTGGTGCGGCGGCC TGGTGATTTCCGCGGCCGGGATCCACTTCCACCAGATCTGGATGCTGTGGCTGGGCTCGGGCGTGATCGGCGGCATTGGT CTGGGCCTGGGCTACATCTCGCCGGTGTCCACCCTGATCAAATGGTTCCCGGACCGCCGCGGCATGGCGACCGGCATGGC GATCATGGGCTTCGGCGGCGGCGCGATGATCGGCAGCCCGCTGGCCGATGCGCTGATGCGCCACTTCGCCACCCCCACCT CGGTGGGCGTGATGGAAACCTTCCTGGTGATGGCGGCGCTGTATTTCGTCTTCATGATGGCTGGCGCCTTCGGCTACCGC GTGCCGCCCAGCGGCTGGACGCCGGCCGGCTGGACCGCGCCGGTGGCCTCCAACAACGCCATGATCACTGCCAACCACGT GCACGTGAAAAAGGTCTGGGGCATTCCGCAGTTCTGGCTGCTGTGGGGCGTGCTGTGCCTCAACGTCTCGGCCGGTATCG GCGTGATCGGCATGTCCTCGCCGATGCTGCAGGAAGTCTTCGGCGGCCGTCTGATCGGTGTGGATGCCGGCTTCGGCAGC CTGGATGCCGCGCAGCTGGCCAGCATCGCCGCGATTGCGGCCGGCTTCACCGGCCTGTTGAGCCTGTTCAACATCGGTGG CCGCTTCTTCTGGGCCAGCATGTCCGACAAGCTCGGCCGCAAGAACACCTACACGCTGTTCTTCCTGCTGGGCATCTGCC TGTACGCGGCGGCGCCGTCGGCCGGCGGCGTGGGCGGTATCGCGCTGTTCGTGGGCATCTTCTGCATCATCCTGTCGATG TATGGCGGCGGCTTTGCCACCATTCCCGCGTACCTGGCCGACCTGTTCGGGACCCAGATGGTCGGCGCCATCCACGGCCG CCTGCTCACCGCCTGGGCTACTGCCGGCATCCTCGGCCCGGTGGTGGTTGGCTACATGCGCGAGTACCAGCTGGCGCACG GCAGCCCGCCGTCACAGGTCTACAACACCACCATGTACATCCTCGCCGGCATGCTCGTGCTTGGTCTGATCTGCAACCTG CTGGTGCGCCCGGTGGCCGCGCGTCACTTCATGACGCCCGACGAACTGGCGCGCGAAAAGCAGCTGGCCCACGAAAAGGT GGACCGCAGTGGGCAGGCCGTGCTGGCGCCAGAAGACATGGCGCGCATCGGCCACGGCGGCAATCCTGCGCTGGTGGCGT TTGCCTGGTTGGCAGTGGGCGTCCCGATGGCATTCGGCATCTGGGTCACGCTGCAAAAAGCCTTCGTGCTGTTTCATTGA
Upstream 100 bases:
>100_bases CCACCAGACGGACCCAAGCGTCGCCGCTGCACCCATCGGATCGCGCAGATCGATCGCAGCCATCAATGGACTTCACATCA GTCAGTTAGGGGAAATACGC
Downstream 100 bases:
>100_bases GATGAGATGACCGGCCAGCCTTCCACTCCCGTGCGCCCCGGCAGTGTGGTGCGCACGGTCCGCCGCCATCGCGGTGGCCG CAGCGCCACCGTGCAGGACA
Product: integral membrane transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 559; Mature: 558
Protein sequence:
>559_residues MTQGSTVANANGADAGLLSKERIVARPGFNRWLVPPAALAIHLCIGMAYGFSVFWLPLSKALGITESIACPADMGLFARM VATTCDWKISELQWMYTLFFVLLGCSAAIWGGWLERAGPRKAGVVSALCWCGGLVISAAGIHFHQIWMLWLGSGVIGGIG LGLGYISPVSTLIKWFPDRRGMATGMAIMGFGGGAMIGSPLADALMRHFATPTSVGVMETFLVMAALYFVFMMAGAFGYR VPPSGWTPAGWTAPVASNNAMITANHVHVKKVWGIPQFWLLWGVLCLNVSAGIGVIGMSSPMLQEVFGGRLIGVDAGFGS LDAAQLASIAAIAAGFTGLLSLFNIGGRFFWASMSDKLGRKNTYTLFFLLGICLYAAAPSAGGVGGIALFVGIFCIILSM YGGGFATIPAYLADLFGTQMVGAIHGRLLTAWATAGILGPVVVGYMREYQLAHGSPPSQVYNTTMYILAGMLVLGLICNL LVRPVAARHFMTPDELAREKQLAHEKVDRSGQAVLAPEDMARIGHGGNPALVAFAWLAVGVPMAFGIWVTLQKAFVLFH
Sequences:
>Translated_559_residues MTQGSTVANANGADAGLLSKERIVARPGFNRWLVPPAALAIHLCIGMAYGFSVFWLPLSKALGITESIACPADMGLFARM VATTCDWKISELQWMYTLFFVLLGCSAAIWGGWLERAGPRKAGVVSALCWCGGLVISAAGIHFHQIWMLWLGSGVIGGIG LGLGYISPVSTLIKWFPDRRGMATGMAIMGFGGGAMIGSPLADALMRHFATPTSVGVMETFLVMAALYFVFMMAGAFGYR VPPSGWTPAGWTAPVASNNAMITANHVHVKKVWGIPQFWLLWGVLCLNVSAGIGVIGMSSPMLQEVFGGRLIGVDAGFGS LDAAQLASIAAIAAGFTGLLSLFNIGGRFFWASMSDKLGRKNTYTLFFLLGICLYAAAPSAGGVGGIALFVGIFCIILSM YGGGFATIPAYLADLFGTQMVGAIHGRLLTAWATAGILGPVVVGYMREYQLAHGSPPSQVYNTTMYILAGMLVLGLICNL LVRPVAARHFMTPDELAREKQLAHEKVDRSGQAVLAPEDMARIGHGGNPALVAFAWLAVGVPMAFGIWVTLQKAFVLFH >Mature_558_residues TQGSTVANANGADAGLLSKERIVARPGFNRWLVPPAALAIHLCIGMAYGFSVFWLPLSKALGITESIACPADMGLFARMV ATTCDWKISELQWMYTLFFVLLGCSAAIWGGWLERAGPRKAGVVSALCWCGGLVISAAGIHFHQIWMLWLGSGVIGGIGL GLGYISPVSTLIKWFPDRRGMATGMAIMGFGGGAMIGSPLADALMRHFATPTSVGVMETFLVMAALYFVFMMAGAFGYRV PPSGWTPAGWTAPVASNNAMITANHVHVKKVWGIPQFWLLWGVLCLNVSAGIGVIGMSSPMLQEVFGGRLIGVDAGFGSL DAAQLASIAAIAAGFTGLLSLFNIGGRFFWASMSDKLGRKNTYTLFFLLGICLYAAAPSAGGVGGIALFVGIFCIILSMY GGGFATIPAYLADLFGTQMVGAIHGRLLTAWATAGILGPVVVGYMREYQLAHGSPPSQVYNTTMYILAGMLVLGLICNLL VRPVAARHFMTPDELAREKQLAHEKVDRSGQAVLAPEDMARIGHGGNPALVAFAWLAVGVPMAFGIWVTLQKAFVLFH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789969, Length=370, Percent_Identity=22.972972972973, Blast_Score=99, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004741 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 59219; Mature: 59088
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQGSTVANANGADAGLLSKERIVARPGFNRWLVPPAALAIHLCIGMAYGFSVFWLPLSK CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALGITESIACPADMGLFARMVATTCDWKISELQWMYTLFFVLLGCSAAIWGGWLERAGPR HHCCHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KAGVVSALCWCGGLVISAAGIHFHQIWMLWLGSGVIGGIGLGLGYISPVSTLIKWFPDRR HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC GMATGMAIMGFGGGAMIGSPLADALMRHFATPTSVGVMETFLVMAALYFVFMMAGAFGYR CCHHCEEEEECCCCHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC VPPSGWTPAGWTAPVASNNAMITANHVHVKKVWGIPQFWLLWGVLCLNVSAGIGVIGMSS CCCCCCCCCCCCCCCCCCCCEEEECCEEEEHHCCCCHHHHHHHHHHHHHCCCCCEEECCC PMLQEVFGGRLIGVDAGFGSLDAAQLASIAAIAAGFTGLLSLFNIGGRFFWASMSDKLGR HHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHCCC KNTYTLFFLLGICLYAAAPSAGGVGGIALFVGIFCIILSMYGGGFATIPAYLADLFGTQM CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VGAIHGRLLTAWATAGILGPVVVGYMREYQLAHGSPPSQVYNTTMYILAGMLVLGLICNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LVRPVAARHFMTPDELAREKQLAHEKVDRSGQAVLAPEDMARIGHGGNPALVAFAWLAVG HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHCCCCCHHHHHHHHHHHH VPMAFGIWVTLQKAFVLFH HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TQGSTVANANGADAGLLSKERIVARPGFNRWLVPPAALAIHLCIGMAYGFSVFWLPLSK CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALGITESIACPADMGLFARMVATTCDWKISELQWMYTLFFVLLGCSAAIWGGWLERAGPR HHCCHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KAGVVSALCWCGGLVISAAGIHFHQIWMLWLGSGVIGGIGLGLGYISPVSTLIKWFPDRR HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC GMATGMAIMGFGGGAMIGSPLADALMRHFATPTSVGVMETFLVMAALYFVFMMAGAFGYR CCHHCEEEEECCCCHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC VPPSGWTPAGWTAPVASNNAMITANHVHVKKVWGIPQFWLLWGVLCLNVSAGIGVIGMSS CCCCCCCCCCCCCCCCCCCCEEEECCEEEEHHCCCCHHHHHHHHHHHHHCCCCCEEECCC PMLQEVFGGRLIGVDAGFGSLDAAQLASIAAIAAGFTGLLSLFNIGGRFFWASMSDKLGR HHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHCCC KNTYTLFFLLGICLYAAAPSAGGVGGIALFVGIFCIILSMYGGGFATIPAYLADLFGTQM CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VGAIHGRLLTAWATAGILGPVVVGYMREYQLAHGSPPSQVYNTTMYILAGMLVLGLICNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LVRPVAARHFMTPDELAREKQLAHEKVDRSGQAVLAPEDMARIGHGGNPALVAFAWLAVG HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHCCCCCHHHHHHHHHHHH VPMAFGIWVTLQKAFVLFH HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]