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The map label for this gene is fdhD [H]

Identifier: 66768082

GI number: 66768082

Start: 2140614

End: 2141459

Strand: Direct

Name: fdhD [H]

Synonym: XC_1761

Alternate gene names: 66768082

Gene position: 2140614-2141459 (Clockwise)

Preceding gene: 66768081

Following gene: 66768083

Centisome position: 41.58

GC content: 67.14

Gene sequence:

>846_bases
ATGACCGGCCAGCCTTCCACTCCCGTGCGCCCCGGCAGTGTGGTGCGCACGGTCCGCCGCCATCGCGGTGGCCGCAGCGC
CACCGTGCAGGACATGGTGGCGGCCGAAATGCCGGTCGCCTTCAATTACAACGGCGTGCCGTTCGCAGTGATGATGGCCA
CCCCCGAAGACCTGGAAGATTTCGCGCTGGGGTTTTCGTTGAGCGAGGGCATCGTGGACCACCCGCAGGACCTGCGGGTG
GTGGCGGTGGACACCTTTCTGGAAGGCGCCTCGCTGCAGATCGAGATCCCGCCCGAGCGCGCGGCCGCGTTGGATCAGCG
GCGGCGCAATCTGGACGGGCGCAGCGGTTGCGGGGTGTGCGGCAACGAGTCGATCGAAGCAGTGTTGCGTGTGCCGCCGG
TCCTGCAGTCGGCATTGCGCATCGATGTCGACGCGTTGGCGCGCGCGCTGGATGCACTGCACGCGCGGCAGCCCATCGCG
GCGCAGACCGGCGCGGTGCACGCGGCCGGTTGGGCCGATGCGCAGGGCATGGTGCAGTTGGTCCGCGAAGACGTGGGCCG
GCATAACGCGTTGGACAAGTTGATCGGTGCGTTGGCGCGTGCGCGCGTCGATGCAACGCAAGGGTTTGCGGTGGTGACCA
GCCGCGCAAGTTACGAGATGGCCATGAAAGCTGCGCAGGCCCGAATCCCGCTGTTGGCGGCGATTTCGGCACCCACTGCG
CTGGCGATCAGTCTGGCCGACAGTGCGGGTTTGACCCTGATCGGGTTTGCCCGCGATCACGATTGTGTTGTTTACAGCCA
TCCTCAACGCCTGGACCTGGGCGTTGCCGTGGGAGAGCCCGCATGA

Upstream 100 bases:

>100_bases
TGCGCTGGTGGCGTTTGCCTGGTTGGCAGTGGGCGTCCCGATGGCATTCGGCATCTGGGTCACGCTGCAAAAAGCCTTCG
TGCTGTTTCATTGAGATGAG

Downstream 100 bases:

>100_bases
GCAAGAAAACCATCAAGCAGTACGACAATCCCGCGGGCGGCTGGGGCGCATTGCGCTCGGTGGCCAAACACCTGATGGAA
CAGGACATCGCGGTGCAGGG

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MTGQPSTPVRPGSVVRTVRRHRGGRSATVQDMVAAEMPVAFNYNGVPFAVMMATPEDLEDFALGFSLSEGIVDHPQDLRV
VAVDTFLEGASLQIEIPPERAAALDQRRRNLDGRSGCGVCGNESIEAVLRVPPVLQSALRIDVDALARALDALHARQPIA
AQTGAVHAAGWADAQGMVQLVREDVGRHNALDKLIGALARARVDATQGFAVVTSRASYEMAMKAAQARIPLLAAISAPTA
LAISLADSAGLTLIGFARDHDCVVYSHPQRLDLGVAVGEPA

Sequences:

>Translated_281_residues
MTGQPSTPVRPGSVVRTVRRHRGGRSATVQDMVAAEMPVAFNYNGVPFAVMMATPEDLEDFALGFSLSEGIVDHPQDLRV
VAVDTFLEGASLQIEIPPERAAALDQRRRNLDGRSGCGVCGNESIEAVLRVPPVLQSALRIDVDALARALDALHARQPIA
AQTGAVHAAGWADAQGMVQLVREDVGRHNALDKLIGALARARVDATQGFAVVTSRASYEMAMKAAQARIPLLAAISAPTA
LAISLADSAGLTLIGFARDHDCVVYSHPQRLDLGVAVGEPA
>Mature_280_residues
TGQPSTPVRPGSVVRTVRRHRGGRSATVQDMVAAEMPVAFNYNGVPFAVMMATPEDLEDFALGFSLSEGIVDHPQDLRVV
AVDTFLEGASLQIEIPPERAAALDQRRRNLDGRSGCGVCGNESIEAVLRVPPVLQSALRIDVDALARALDALHARQPIAA
QTGAVHAAGWADAQGMVQLVREDVGRHNALDKLIGALARARVDATQGFAVVTSRASYEMAMKAAQARIPLLAAISAPTAL
AISLADSAGLTLIGFARDHDCVVYSHPQRLDLGVAVGEPA

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=241, Percent_Identity=45.643153526971, Blast_Score=203, Evalue=9e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 29650; Mature: 29519

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGQPSTPVRPGSVVRTVRRHRGGRSATVQDMVAAEMPVAFNYNGVPFAVMMATPEDLED
CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEECCCCCEEEEEECCCCHHH
FALGFSLSEGIVDHPQDLRVVAVDTFLEGASLQIEIPPERAAALDQRRRNLDGRSGCGVC
HHHCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCC
GNESIEAVLRVPPVLQSALRIDVDALARALDALHARQPIAAQTGAVHAAGWADAQGMVQL
CCHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHH
VREDVGRHNALDKLIGALARARVDATQGFAVVTSRASYEMAMKAAQARIPLLAAISAPTA
HHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEECCCCE
LAISLADSAGLTLIGFARDHDCVVYSHPQRLDLGVAVGEPA
EEEEECCCCCEEEEEECCCCCEEEEECCCEEEEEEECCCCC
>Mature Secondary Structure 
TGQPSTPVRPGSVVRTVRRHRGGRSATVQDMVAAEMPVAFNYNGVPFAVMMATPEDLED
CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEECCCCCEEEEEECCCCHHH
FALGFSLSEGIVDHPQDLRVVAVDTFLEGASLQIEIPPERAAALDQRRRNLDGRSGCGVC
HHHCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCC
GNESIEAVLRVPPVLQSALRIDVDALARALDALHARQPIAAQTGAVHAAGWADAQGMVQL
CCHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHH
VREDVGRHNALDKLIGALARARVDATQGFAVVTSRASYEMAMKAAQARIPLLAAISAPTA
HHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEECCCCE
LAISLADSAGLTLIGFARDHDCVVYSHPQRLDLGVAVGEPA
EEEEECCCCCEEEEEECCCCCEEEEECCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]