Click here to switch to the map view.

The map label for this gene is yddQ [H]

Identifier: 66768074

GI number: 66768074

Start: 2126568

End: 2127056

Strand: Direct

Name: yddQ [H]

Synonym: XC_1753

Alternate gene names: 66768074

Gene position: 2126568-2127056 (Clockwise)

Preceding gene: 66768072

Following gene: 66768081

Centisome position: 41.3

GC content: 65.24

Gene sequence:

>489_bases
ATGAGCACTGCATTGATCGTGGTGGATATCCAGAACGATTACTTCCCCGGTGGCCGTTTCCCGCTCGAGAACAGCGAGCA
GGCATTGGCCAGCGCCCTGGAGCACATTGCGCAGGCCAAGCAGGCCGGCCAAGTGGTGATCGGCATCCGGCACACCGCAC
CGGGCGATGGCCCGCTCCTTGCCGATGGCAGTGTGGGCGCCGAGTTTCATCCGGCGATTGCCGCGGCGCTCGAAGGCTGC
ACGGTGATCGAGAAGCATCAGGCCGATAGCTTCCTGGGCACCTCGCTCGGACAGACGCTTGCCGGTGCGAATGTTGCAGC
GATCCAGCTTGCCGGCATGATGACGCAGCACTGCATCACCCACACCGCGTTGTCGCCGGACGCCGCTGGTTTTGATGTGG
CGATCATCGCTGCGGCCTGCGCGGCGCCAACGGCGGTGATCAGCGACGTTGCGCTGTCCGGCCTGGCGGGGCGTTGCACG
GTGCTGTGA

Upstream 100 bases:

>100_bases
CTTTCGTGCCGCTGCGCATCACCGAGATCCCGTTGCGCCGCTGCACACCGGCGTGTGGCTGGCCACACCCGGCAACACCC
TGACATTCGAGGAGCAACAC

Downstream 100 bases:

>100_bases
TCTGGGGTGCTGGTTGCTGCGGCCTGCAGGCGCGCAACCACCGCAGCGTCGCGCGCCTGATCAGCCATCACGCGATGACA
GGCGCGCGCTCAGCCAAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MSTALIVVDIQNDYFPGGRFPLENSEQALASALEHIAQAKQAGQVVIGIRHTAPGDGPLLADGSVGAEFHPAIAAALEGC
TVIEKHQADSFLGTSLGQTLAGANVAAIQLAGMMTQHCITHTALSPDAAGFDVAIIAAACAAPTAVISDVALSGLAGRCT
VL

Sequences:

>Translated_162_residues
MSTALIVVDIQNDYFPGGRFPLENSEQALASALEHIAQAKQAGQVVIGIRHTAPGDGPLLADGSVGAEFHPAIAAALEGC
TVIEKHQADSFLGTSLGQTLAGANVAAIQLAGMMTQHCITHTALSPDAAGFDVAIIAAACAAPTAVISDVALSGLAGRCT
VL
>Mature_161_residues
STALIVVDIQNDYFPGGRFPLENSEQALASALEHIAQAKQAGQVVIGIRHTAPGDGPLLADGSVGAEFHPAIAAALEGCT
VIEKHQADSFLGTSLGQTLAGANVAAIQLAGMMTQHCITHTALSPDAAGFDVAIIAAACAAPTAVISDVALSGLAGRCTV
L

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 16270; Mature: 16138

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTALIVVDIQNDYFPGGRFPLENSEQALASALEHIAQAKQAGQVVIGIRHTAPGDGPLL
CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEE
ADGSVGAEFHPAIAAALEGCTVIEKHQADSFLGTSLGQTLAGANVAAIQLAGMMTQHCIT
ECCCCCCCHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
HTALSPDAAGFDVAIIAAACAAPTAVISDVALSGLAGRCTVL
HHCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCEEECC
>Mature Secondary Structure 
STALIVVDIQNDYFPGGRFPLENSEQALASALEHIAQAKQAGQVVIGIRHTAPGDGPLL
CCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEE
ADGSVGAEFHPAIAAALEGCTVIEKHQADSFLGTSLGQTLAGANVAAIQLAGMMTQHCIT
ECCCCCCCHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
HTALSPDAAGFDVAIIAAACAAPTAVISDVALSGLAGRCTVL
HHCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]