| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is phoA [H]
Identifier: 66767845
GI number: 66767845
Start: 1827645
End: 1829351
Strand: Reverse
Name: phoA [H]
Synonym: XC_1519
Alternate gene names: 66767845
Gene position: 1829351-1827645 (Counterclockwise)
Preceding gene: 66767848
Following gene: 66767844
Centisome position: 35.53
GC content: 69.65
Gene sequence:
>1707_bases ATGCCGATGCGTTACCGCCTGCCTGCCCTCGCCGCCCTGACCACGCTATGCGTGGCCGCCTGCGCTTCCACTGCCGGATC CACCACCGCGGCGCCCGCCTCGGTCAAGGTGGACGTGCCACCGGTAACGCATCCGGCCGGCGAAACTCCGCAATGGTGGT ACCGCTCCGGCGCCGCACGTGCGGCCGGCAACGGCGCGATGGCCGGCAAGGCACGCAACGTGGTCCTGTTCCTGGGCGAT GGCATGAGCCTGACCACGGTGGCCGCCGCACGCATCCTGGACGGTCAGCGCAAGGGCGGCCCGGGCGAAGAGAATTTGCT GTCGTGGGAGCAATTCCCCGCCACCGCCTTCAGCAAGACCTACAACACCGATTCGCAGACCCCGGATTCGGCCGGCACCA TGACCGCGATCACCACCGGGGTGAAGTCGCACATGGGCGCGATCGGGGTCAGCAGCGGCAACCGCAGCGACTGTGCCGAC AGCCTGGGCAAGGGCCTGCTGAGCTGGCTGCAACTGGCCGACAGCGCCGGCATGGCCACCGGTGTGGTCACCACCACCCG TCTGACCCACGCCACGCCGGCGGCGACCTACGCGCATTCGCCGGACCGCAACTGGGAGAACGACACCGACCTGCCCGAGG CCGCCCGCATCGCCGGCTGCCAGGACATCGCCCAGCAATTGCTCTCCACCGCACGCTTCGGGCGTGGCCCGCAGGTGGTG CTCGGCGGCGGCCGCAGCCAGTTCCAGACCGTGCAGGAGCGCGACCCCGAGTACGACGACAAGGTCGGCCTGCGCCTGGA CGGGCGCGACCTGGTGGCCGAGTGGAAGCAGTCCCACCCGCAAGGCGCCTACGTGTGGAACGAACAGCAATTGCAGGCCG CCGCCGGCGCACCCGCGTTGCTGGGCCTGTTCGAGCCCGATCACATGCAGTTCGACCATGACCGCAACCGCACGCCGCAA GGCGAGCCCAGCCTGACCGAGATGACCCGCACCGCGATCCAGTCGCTGTCGCGCGACCCGAACGGCTTCGTGCTGATGGT CGAAGGCGGCCGTATCGATCACGCCAACCACGCGGGCAATGCCTACCGCGCGCTGGACGAGACCGTCTCGCTGTCGGATG CAGTGCGCACCGCCGTGCAGACAGCGCCGCCGGACACGCTGATCATCGTCACCGCCGACCATTCGCACACGCTCAACTTT GTCGGCTACCCGGTGCGTGGCAACCCGATCCTGGGCAAGGTGCGCGGCACCGGCGGCGAAGAAGGCGACCGCACCCAGCT GGCCACCGATCTGGCCGGCCAGCCCTACACCACCCTCAGCTACGCCAATGGCCCCGGCCATACCGGCGCGACCAACGCAC AGCCGGCCGGGCCGAAAAAGTATCCGCACGAGCCCAGCAGCAGCGAGCCGGCAAGCGGCCGCCCCGACCTGACCCACGTG GATACCGAGGCGCCCAGCTACATGCAGGAATCGCTGGTACCGACCAAGTCTGAAAGCCACGGCGGCGAAGACGTCGGCAT CTGGGCCACCGGCCCGGGCAGCGCGGCGTTCCGCGGCACGCTGGAAGAGAACGTGATCTACCACGTCATCGTCCAGGCCA CCCCGCGTCTACGTGCGCGCCTGTGCAAGGCCGGCACCTGCGACAGCGCGGGTGTGCCGGTGAACCTGCCCGCACCCACC ACCTTCGAGCGCGCGACCCAGCGCTGA
Upstream 100 bases:
>100_bases AGGGCCGCCCTGCCCGCGAGGCCACGACTGGAACAGCGGCGTGTCATCAGTGCGACGGATGCATCCCGGCATAATGGGCA TTGATTCAGTCACGAGTTCG
Downstream 100 bases:
>100_bases TGGCCGAGCGCACCGCGCACGACCGGTGCGGTGCGCGGCTGGCAGCGGTCGGCGTCATGACGGGCGTGGCCTGACGTGGA CGTGATGCAGGCAGCCGGGT
Product: alkaline phosphatase
Products: NA
Alternate protein names: High molecular weight phosphatase; H-AP [H]
Number of amino acids: Translated: 568; Mature: 567
Protein sequence:
>568_residues MPMRYRLPALAALTTLCVAACASTAGSTTAAPASVKVDVPPVTHPAGETPQWWYRSGAARAAGNGAMAGKARNVVLFLGD GMSLTTVAAARILDGQRKGGPGEENLLSWEQFPATAFSKTYNTDSQTPDSAGTMTAITTGVKSHMGAIGVSSGNRSDCAD SLGKGLLSWLQLADSAGMATGVVTTTRLTHATPAATYAHSPDRNWENDTDLPEAARIAGCQDIAQQLLSTARFGRGPQVV LGGGRSQFQTVQERDPEYDDKVGLRLDGRDLVAEWKQSHPQGAYVWNEQQLQAAAGAPALLGLFEPDHMQFDHDRNRTPQ GEPSLTEMTRTAIQSLSRDPNGFVLMVEGGRIDHANHAGNAYRALDETVSLSDAVRTAVQTAPPDTLIIVTADHSHTLNF VGYPVRGNPILGKVRGTGGEEGDRTQLATDLAGQPYTTLSYANGPGHTGATNAQPAGPKKYPHEPSSSEPASGRPDLTHV DTEAPSYMQESLVPTKSESHGGEDVGIWATGPGSAAFRGTLEENVIYHVIVQATPRLRARLCKAGTCDSAGVPVNLPAPT TFERATQR
Sequences:
>Translated_568_residues MPMRYRLPALAALTTLCVAACASTAGSTTAAPASVKVDVPPVTHPAGETPQWWYRSGAARAAGNGAMAGKARNVVLFLGD GMSLTTVAAARILDGQRKGGPGEENLLSWEQFPATAFSKTYNTDSQTPDSAGTMTAITTGVKSHMGAIGVSSGNRSDCAD SLGKGLLSWLQLADSAGMATGVVTTTRLTHATPAATYAHSPDRNWENDTDLPEAARIAGCQDIAQQLLSTARFGRGPQVV LGGGRSQFQTVQERDPEYDDKVGLRLDGRDLVAEWKQSHPQGAYVWNEQQLQAAAGAPALLGLFEPDHMQFDHDRNRTPQ GEPSLTEMTRTAIQSLSRDPNGFVLMVEGGRIDHANHAGNAYRALDETVSLSDAVRTAVQTAPPDTLIIVTADHSHTLNF VGYPVRGNPILGKVRGTGGEEGDRTQLATDLAGQPYTTLSYANGPGHTGATNAQPAGPKKYPHEPSSSEPASGRPDLTHV DTEAPSYMQESLVPTKSESHGGEDVGIWATGPGSAAFRGTLEENVIYHVIVQATPRLRARLCKAGTCDSAGVPVNLPAPT TFERATQR >Mature_567_residues PMRYRLPALAALTTLCVAACASTAGSTTAAPASVKVDVPPVTHPAGETPQWWYRSGAARAAGNGAMAGKARNVVLFLGDG MSLTTVAAARILDGQRKGGPGEENLLSWEQFPATAFSKTYNTDSQTPDSAGTMTAITTGVKSHMGAIGVSSGNRSDCADS LGKGLLSWLQLADSAGMATGVVTTTRLTHATPAATYAHSPDRNWENDTDLPEAARIAGCQDIAQQLLSTARFGRGPQVVL GGGRSQFQTVQERDPEYDDKVGLRLDGRDLVAEWKQSHPQGAYVWNEQQLQAAAGAPALLGLFEPDHMQFDHDRNRTPQG EPSLTEMTRTAIQSLSRDPNGFVLMVEGGRIDHANHAGNAYRALDETVSLSDAVRTAVQTAPPDTLIIVTADHSHTLNFV GYPVRGNPILGKVRGTGGEEGDRTQLATDLAGQPYTTLSYANGPGHTGATNAQPAGPKKYPHEPSSSEPASGRPDLTHVD TEAPSYMQESLVPTKSESHGGEDVGIWATGPGSAAFRGTLEENVIYHVIVQATPRLRARLCKAGTCDSAGVPVNLPAPTT FERATQR
Specific function: Has only a phosphomonoesterase activity [H]
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Secreted. Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI94721246, Length=520, Percent_Identity=42.1153846153846, Blast_Score=369, Evalue=1e-102, Organism=Homo sapiens, GI157266296, Length=520, Percent_Identity=41.9230769230769, Blast_Score=369, Evalue=1e-102, Organism=Homo sapiens, GI157266292, Length=497, Percent_Identity=41.2474849094567, Blast_Score=358, Evalue=9e-99, Organism=Homo sapiens, GI116734717, Length=473, Percent_Identity=42.0718816067653, Blast_Score=350, Evalue=2e-96, Organism=Homo sapiens, GI294660770, Length=468, Percent_Identity=42.0940170940171, Blast_Score=342, Evalue=6e-94, Organism=Homo sapiens, GI294660772, Length=436, Percent_Identity=39.4495412844037, Blast_Score=296, Evalue=5e-80, Organism=Escherichia coli, GI48994877, Length=369, Percent_Identity=31.1653116531165, Blast_Score=115, Evalue=8e-27, Organism=Saccharomyces cerevisiae, GI6320689, Length=354, Percent_Identity=31.9209039548023, Blast_Score=130, Evalue=4e-31, Organism=Drosophila melanogaster, GI24651554, Length=529, Percent_Identity=39.6975425330813, Blast_Score=306, Evalue=2e-83, Organism=Drosophila melanogaster, GI21355149, Length=490, Percent_Identity=39.7959183673469, Blast_Score=306, Evalue=3e-83, Organism=Drosophila melanogaster, GI21358067, Length=469, Percent_Identity=41.5778251599147, Blast_Score=304, Evalue=1e-82, Organism=Drosophila melanogaster, GI21355151, Length=473, Percent_Identity=41.4376321353066, Blast_Score=301, Evalue=1e-81, Organism=Drosophila melanogaster, GI24657835, Length=514, Percent_Identity=38.1322957198444, Blast_Score=297, Evalue=1e-80, Organism=Drosophila melanogaster, GI85725200, Length=493, Percent_Identity=39.9594320486815, Blast_Score=296, Evalue=2e-80, Organism=Drosophila melanogaster, GI85815833, Length=493, Percent_Identity=39.9594320486815, Blast_Score=296, Evalue=2e-80, Organism=Drosophila melanogaster, GI19921912, Length=539, Percent_Identity=37.4768089053803, Blast_Score=289, Evalue=5e-78, Organism=Drosophila melanogaster, GI18859923, Length=487, Percent_Identity=39.6303901437372, Blast_Score=286, Evalue=3e-77, Organism=Drosophila melanogaster, GI24585213, Length=551, Percent_Identity=37.0235934664247, Blast_Score=284, Evalue=1e-76, Organism=Drosophila melanogaster, GI24651556, Length=476, Percent_Identity=41.3865546218487, Blast_Score=284, Evalue=1e-76, Organism=Drosophila melanogaster, GI21355981, Length=472, Percent_Identity=38.5593220338983, Blast_Score=282, Evalue=4e-76, Organism=Drosophila melanogaster, GI24657842, Length=512, Percent_Identity=37.6953125, Blast_Score=280, Evalue=2e-75, Organism=Drosophila melanogaster, GI24657827, Length=498, Percent_Identity=39.1566265060241, Blast_Score=277, Evalue=1e-74, Organism=Drosophila melanogaster, GI24645593, Length=363, Percent_Identity=25.6198347107438, Blast_Score=76, Evalue=5e-14,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 59947; Mature: 59816
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMRYRLPALAALTTLCVAACASTAGSTTAAPASVKVDVPPVTHPAGETPQWWYRSGAAR CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHCCCCC AAGNGAMAGKARNVVLFLGDGMSLTTVAAARILDGQRKGGPGEENLLSWEQFPATAFSKT CCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHCCCHHHCCCHHHHHC YNTDSQTPDSAGTMTAITTGVKSHMGAIGVSSGNRSDCADSLGKGLLSWLQLADSAGMAT CCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEE GVVTTTRLTHATPAATYAHSPDRNWENDTDLPEAARIAGCQDIAQQLLSTARFGRGPQVV CEEEEEEECCCCCCHHCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHCCCCCEEE LGGGRSQFQTVQERDPEYDDKVGLRLDGRDLVAEWKQSHPQGAYVWNEQQLQAAAGAPAL ECCCHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHCCCCCCEEECHHHHHHHCCCCCE LGLFEPDHMQFDHDRNRTPQGEPSLTEMTRTAIQSLSRDPNGFVLMVEGGRIDHANHAGN EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCH AYRALDETVSLSDAVRTAVQTAPPDTLIIVTADHSHTLNFVGYPVRGNPILGKVRGTGGE HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCC EGDRTQLATDLAGQPYTTLSYANGPGHTGATNAQPAGPKKYPHEPSSSEPASGRPDLTHV CCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE DTEAPSYMQESLVPTKSESHGGEDVGIWATGPGSAAFRGTLEENVIYHVIVQATPRLRAR CCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHCCEEEEEEEECCHHHHHH LCKAGTCDSAGVPVNLPAPTTFERATQR HHCCCCCCCCCCEEECCCCCHHHHHCCC >Mature Secondary Structure PMRYRLPALAALTTLCVAACASTAGSTTAAPASVKVDVPPVTHPAGETPQWWYRSGAAR CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHCCCCC AAGNGAMAGKARNVVLFLGDGMSLTTVAAARILDGQRKGGPGEENLLSWEQFPATAFSKT CCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHCCCHHHCCCHHHHHC YNTDSQTPDSAGTMTAITTGVKSHMGAIGVSSGNRSDCADSLGKGLLSWLQLADSAGMAT CCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEE GVVTTTRLTHATPAATYAHSPDRNWENDTDLPEAARIAGCQDIAQQLLSTARFGRGPQVV CEEEEEEECCCCCCHHCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHCCCCCEEE LGGGRSQFQTVQERDPEYDDKVGLRLDGRDLVAEWKQSHPQGAYVWNEQQLQAAAGAPAL ECCCHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHCCCCCCEEECHHHHHHHCCCCCE LGLFEPDHMQFDHDRNRTPQGEPSLTEMTRTAIQSLSRDPNGFVLMVEGGRIDHANHAGN EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCH AYRALDETVSLSDAVRTAVQTAPPDTLIIVTADHSHTLNFVGYPVRGNPILGKVRGTGGE HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCC EGDRTQLATDLAGQPYTTLSYANGPGHTGATNAQPAGPKKYPHEPSSSEPASGRPDLTHV CCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE DTEAPSYMQESLVPTKSESHGGEDVGIWATGPGSAAFRGTLEENVIYHVIVQATPRLRAR CCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHCCEEEEEEEECCHHHHHH LCKAGTCDSAGVPVNLPAPTTFERATQR HHCCCCCCCCCCEEECCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043; 8454193 [H]