| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
Click here to switch to the map view.
The map label for this gene is 66767839
Identifier: 66767839
GI number: 66767839
Start: 1823051
End: 1823440
Strand: Direct
Name: 66767839
Synonym: XC_1513
Alternate gene names: NA
Gene position: 1823051-1823440 (Clockwise)
Preceding gene: 66767838
Following gene: 66767846
Centisome position: 35.41
GC content: 64.36
Gene sequence:
>390_bases ATGAGCGAGTTCGACACACACGCCGCGCCACCACCGCCGCCGATCAGCACCGGCACGCCCTCGGAAGAGCGCACGTTGGC ACTGGCCGCGCACCTGCTGGGCATCCTGACGTCCTTCATCGGCGCGCTGGTGATCTGGCTGATCAGCAAGGACGCCGGCC CGTCCAAGCCGTTTGCCACCGACCAGGCCAAGGAAGCGCTGAACTTCCAGATCACCGTGATCATCGCCTACGTGGCTGCG GTGATCCTGACCATCGTGTCGTTCGGCATCCTGTTCTTCGTGCCGACGCTGGTGTGGGTCGCCAACCTGGTGCTCTGCAT CCTGGCGGCGGTCAAGGCCAACAGCGGCGAGAGCTACCGCTATCCGTTCACGCTGCGCCTGATCAAGTAA
Upstream 100 bases:
>100_bases AGCGTCCCGGCGCTGGCGGACCCATGGCTTCCCGCACTGGTGGCGCGCGGATTGGTTGCTATAGTCCGCCGCACACCACA ACCATGCATGGGGAGACATG
Downstream 100 bases:
>100_bases TTCTTGATTACGCGTAAAACAAAGGCCCGGCAGTCATGCCGGGCCTTTGGCGTTTTTAGAAAGTCACGCAATCAGTTCTG CGCCGGGGTGTTCTCGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MSEFDTHAAPPPPPISTGTPSEERTLALAAHLLGILTSFIGALVIWLISKDAGPSKPFATDQAKEALNFQITVIIAYVAA VILTIVSFGILFFVPTLVWVANLVLCILAAVKANSGESYRYPFTLRLIK
Sequences:
>Translated_129_residues MSEFDTHAAPPPPPISTGTPSEERTLALAAHLLGILTSFIGALVIWLISKDAGPSKPFATDQAKEALNFQITVIIAYVAA VILTIVSFGILFFVPTLVWVANLVLCILAAVKANSGESYRYPFTLRLIK >Mature_128_residues SEFDTHAAPPPPPISTGTPSEERTLALAAHLLGILTSFIGALVIWLISKDAGPSKPFATDQAKEALNFQITVIIAYVAAV ILTIVSFGILFFVPTLVWVANLVLCILAAVKANSGESYRYPFTLRLIK
Specific function: Unknown
COG id: COG3296
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13854; Mature: 13723
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEFDTHAAPPPPPISTGTPSEERTLALAAHLLGILTSFIGALVIWLISKDAGPSKPFAT CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DQAKEALNFQITVIIAYVAAVILTIVSFGILFFVPTLVWVANLVLCILAAVKANSGESYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE YPFTLRLIK CCEEEEEEC >Mature Secondary Structure SEFDTHAAPPPPPISTGTPSEERTLALAAHLLGILTSFIGALVIWLISKDAGPSKPFAT CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DQAKEALNFQITVIIAYVAAVILTIVSFGILFFVPTLVWVANLVLCILAAVKANSGESYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE YPFTLRLIK CCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA