| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is aroK [H]
Identifier: 66767596
GI number: 66767596
Start: 1557493
End: 1558053
Strand: Reverse
Name: aroK [H]
Synonym: XC_1269
Alternate gene names: 66767596
Gene position: 1558053-1557493 (Counterclockwise)
Preceding gene: 66767606
Following gene: 162017106
Centisome position: 30.26
GC content: 68.81
Gene sequence:
>561_bases ATGTTACGATCCGGGCGCATGAACCCCGCTCCCAATCTCGTGATGATCGGCCCGATGGGCGCCGGTAAAAGCTGCATCGG CCGCCGCCTGGCCGAGCGCTTCGGGCTGGATTTCGTGGATGTGGACCAGGCCATCGTCGAGCAGGTCGGCAGCAGCATCC CCGCGATCTTCGAACAGCACGGCGAAGCGCGCTTTCGCCAGCACGAAGCCGAGGCCCTGCACGGCCTGCTCGCGCAGAGC AACAAACTGGTCTCCACCGGCGGCGGCGCGATCCTGGATGCGGGCAATCGCCAGCGCATCCGCGAGCGCGGCTTCGTGGT GTACCTGCATGTGAGCGTGCCGGCCCAGCTCACCCGGCTGGCGCGCGACCGCAATCGCCCGCTGCTGCAGCGCCCGGACC GCGAACAGGTGCTGCACGGCATGGCCGCGCTGCGCACCCCGCTGTACCAGGAAGTGGCCGACCTCACCCTGGAAACCGAT CACCTTTCCCCCGCCGAGGCCACCGCGCAGCTGGTGCTGCGCCTGGCCGCGCAATGGCGCATGTCGAGTACCCCTGCATG A
Upstream 100 bases:
>100_bases TGGCGGCTGCGGCCAAGGCCGGCAGCGCAGGATCTGCAGCGACAGCCCACGCCGCCGGGAGGATCACGCATGGCGCACGC GGCCCTGGGCCGCAATGCCA
Downstream 100 bases:
>100_bases CTCTTCCCCCCTCCTTGCGCAGCGTCGAAGTCGACGGCGCGCAGCCGTACACCATCTCCATTGCGCCGGGCCTGCTGGCC GACGGCGCGCGCCTGGCCCG
Product: shikimate kinase
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MLRSGRMNPAPNLVMIGPMGAGKSCIGRRLAERFGLDFVDVDQAIVEQVGSSIPAIFEQHGEARFRQHEAEALHGLLAQS NKLVSTGGGAILDAGNRQRIRERGFVVYLHVSVPAQLTRLARDRNRPLLQRPDREQVLHGMAALRTPLYQEVADLTLETD HLSPAEATAQLVLRLAAQWRMSSTPA
Sequences:
>Translated_186_residues MLRSGRMNPAPNLVMIGPMGAGKSCIGRRLAERFGLDFVDVDQAIVEQVGSSIPAIFEQHGEARFRQHEAEALHGLLAQS NKLVSTGGGAILDAGNRQRIRERGFVVYLHVSVPAQLTRLARDRNRPLLQRPDREQVLHGMAALRTPLYQEVADLTLETD HLSPAEATAQLVLRLAAQWRMSSTPA >Mature_186_residues MLRSGRMNPAPNLVMIGPMGAGKSCIGRRLAERFGLDFVDVDQAIVEQVGSSIPAIFEQHGEARFRQHEAEALHGLLAQS NKLVSTGGGAILDAGNRQRIRERGFVVYLHVSVPAQLTRLARDRNRPLLQRPDREQVLHGMAALRTPLYQEVADLTLETD HLSPAEATAQLVLRLAAQWRMSSTPA
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Escherichia coli, GI87082255, Length=168, Percent_Identity=39.8809523809524, Blast_Score=134, Evalue=3e-33, Organism=Escherichia coli, GI1786587, Length=163, Percent_Identity=33.7423312883436, Blast_Score=81, Evalue=5e-17,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 20462; Mature: 20462
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRSGRMNPAPNLVMIGPMGAGKSCIGRRLAERFGLDFVDVDQAIVEQVGSSIPAIFEQH CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHH GEARFRQHEAEALHGLLAQSNKLVSTGGGAILDAGNRQRIRERGFVVYLHVSVPAQLTRL HHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEECCCHHHHHHCCEEEEEEECCHHHHHHH ARDRNRPLLQRPDREQVLHGMAALRTPLYQEVADLTLETDHLSPAEATAQLVLRLAAQWR HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH MSSTPA CCCCCC >Mature Secondary Structure MLRSGRMNPAPNLVMIGPMGAGKSCIGRRLAERFGLDFVDVDQAIVEQVGSSIPAIFEQH CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHH GEARFRQHEAEALHGLLAQSNKLVSTGGGAILDAGNRQRIRERGFVVYLHVSVPAQLTRL HHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEECCCHHHHHHCCEEEEEEECCHHHHHHH ARDRNRPLLQRPDREQVLHGMAALRTPLYQEVADLTLETDHLSPAEATAQLVLRLAAQWR HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH MSSTPA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA