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The map label for this gene is yaaH [H]

Identifier: 66767547

GI number: 66767547

Start: 1490741

End: 1491802

Strand: Reverse

Name: yaaH [H]

Synonym: XC_1220

Alternate gene names: 66767547

Gene position: 1491802-1490741 (Counterclockwise)

Preceding gene: 66767548

Following gene: 66767546

Centisome position: 28.97

GC content: 59.6

Gene sequence:

>1062_bases
ATGATCAAGCGATTGACCTGGATGTTGCTCGCGCTGGCGGTTGCCTGCGCGCCCACCTTGGCGCTGGCCAAGAACCCTAC
GGCGCTGTTCTATCTGATGAACACGCAGAAATCGACCAATTCGTTCCTGGCCAATGTCGACAAGATCGATGTGGTGGTGC
CCACCTGGTATGGCGTGGATCAGAACGGCTTGGTCAACGGCACGCCCAACATGTATCTGTACGACATCGCCAAGCAGAAA
AATCTGCGCGTGATGCCGATCCTGTCGATGACCACCGGCCGCGACGGCTTCCACAAGCTGATGCATGACGAAGCGGCCAA
GAAGCGCATGATCGAATCGCTGCTGATCCACGGCAAGCAGCACAAGTACTACGGCTTCCAGTTCGATTTCGAGAACATCG
CCTGGACCGATCGCGATGCCTACACGCTGATGGTCAAGCAGACCGCCGATGCGCTGCACAAGGCCGGTTTCAAGATGTCG
GTGGCAGTGGTGCCCAATGCGCCGGGCCATGCCGAAGGCGGCCAGTTTTCCAAGTGGATGTGGGAATACTGGCGCGGTGC
GTATGACCTGAAAGCACTGGGCCAGGCCGCCGATCTGGTCAGCATCATGACCTACGACCAGCACACCCGCTGGACCACGC
CCGGCCCGGTGGATGGCATGGTGTGGATGAAGAAGCACCTGGACTACGCCATCACCCAGGTACCGAAGGAAAAGCTCTCG
CTGGGTATTGCCACTTACGGCTACCGTTGGTACACCGGCAACCCGGTGAAGGAAGACGGCACCGAAGCGTCGAACATCTC
GGCCACGTATATCGATGCCGACGAATCCTTCCCGCTGGCGATCGAACAGAACGCCACCGTGCAGTGGGATCCGGTGGAGC
AGGAATCGTGGTTTTACTTCTACCGCGACGATATGCGCGAGTGGGTATTCCGCCCGGATGCGCGCAGCTTCAAGGCACGC
TACGACATGGTGAAGCAGTACGGTCTGGAAGGCTTCAGCTGCTGGGTGCTGGGCGCTGAAGATCCGAAGGTGTGGGACGA
GCTGCCGGTGGCGCAGCGCTGA

Upstream 100 bases:

>100_bases
GCTTGCACCTGCGGCTGCCGGCCAAGCCGGTCGGCGAAAGCGCCTACGTGTTCCGCATCGACCTTGCGCCCTCTTCCACT
CCCTGACGGATCCTGTCTTC

Downstream 100 bases:

>100_bases
GCCCGCCATGCAACAGGGCGGCGCGCGCACGAAGCGTGCGCCAGTCCCTGCGTTGTTCGCCACGGCTTTGCTACTGTGCG
TGGCTGCCGTGTCCTGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MIKRLTWMLLALAVACAPTLALAKNPTALFYLMNTQKSTNSFLANVDKIDVVVPTWYGVDQNGLVNGTPNMYLYDIAKQK
NLRVMPILSMTTGRDGFHKLMHDEAAKKRMIESLLIHGKQHKYYGFQFDFENIAWTDRDAYTLMVKQTADALHKAGFKMS
VAVVPNAPGHAEGGQFSKWMWEYWRGAYDLKALGQAADLVSIMTYDQHTRWTTPGPVDGMVWMKKHLDYAITQVPKEKLS
LGIATYGYRWYTGNPVKEDGTEASNISATYIDADESFPLAIEQNATVQWDPVEQESWFYFYRDDMREWVFRPDARSFKAR
YDMVKQYGLEGFSCWVLGAEDPKVWDELPVAQR

Sequences:

>Translated_353_residues
MIKRLTWMLLALAVACAPTLALAKNPTALFYLMNTQKSTNSFLANVDKIDVVVPTWYGVDQNGLVNGTPNMYLYDIAKQK
NLRVMPILSMTTGRDGFHKLMHDEAAKKRMIESLLIHGKQHKYYGFQFDFENIAWTDRDAYTLMVKQTADALHKAGFKMS
VAVVPNAPGHAEGGQFSKWMWEYWRGAYDLKALGQAADLVSIMTYDQHTRWTTPGPVDGMVWMKKHLDYAITQVPKEKLS
LGIATYGYRWYTGNPVKEDGTEASNISATYIDADESFPLAIEQNATVQWDPVEQESWFYFYRDDMREWVFRPDARSFKAR
YDMVKQYGLEGFSCWVLGAEDPKVWDELPVAQR
>Mature_353_residues
MIKRLTWMLLALAVACAPTLALAKNPTALFYLMNTQKSTNSFLANVDKIDVVVPTWYGVDQNGLVNGTPNMYLYDIAKQK
NLRVMPILSMTTGRDGFHKLMHDEAAKKRMIESLLIHGKQHKYYGFQFDFENIAWTDRDAYTLMVKQTADALHKAGFKMS
VAVVPNAPGHAEGGQFSKWMWEYWRGAYDLKALGQAADLVSIMTYDQHTRWTTPGPVDGMVWMKKHLDYAITQVPKEKLS
LGIATYGYRWYTGNPVKEDGTEASNISATYIDADESFPLAIEQNATVQWDPVEQESWFYFYRDDMREWVFRPDARSFKAR
YDMVKQYGLEGFSCWVLGAEDPKVWDELPVAQR

Specific function: May be required for the L-alanine-stimulated germination pathway [H]

COG id: COG3858

COG function: function code R; Predicted glycosyl hydrolase

Gene ontology:

Cell location: Spore wall (Probable). Note=Probably localized either on the surface of the outer spore membrane and/or in the inner spore coat [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011583
- InterPro:   IPR001223
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF00704 Glyco_hydro_18; PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 40488; Mature: 40488

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRLTWMLLALAVACAPTLALAKNPTALFYLMNTQKSTNSFLANVDKIDVVVPTWYGVD
CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHCCCCEEEEEEEEEECCC
QNGLVNGTPNMYLYDIAKQKNLRVMPILSMTTGRDGFHKLMHDEAAKKRMIESLLIHGKQ
CCCEECCCCCEEEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
HKYYGFQFDFENIAWTDRDAYTLMVKQTADALHKAGFKMSVAVVPNAPGHAEGGQFSKWM
CCEEEEEEECCCCEECCCCEEEEEEEHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHH
WEYWRGAYDLKALGQAADLVSIMTYDQHTRWTTPGPVDGMVWMKKHLDYAITQVPKEKLS
HHHHCCCCCHHHHCCHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHH
LGIATYGYRWYTGNPVKEDGTEASNISATYIDADESFPLAIEQNATVQWDPVEQESWFYF
EEEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCEEEECCCCCCCEEEE
YRDDMREWVFRPDARSFKARYDMVKQYGLEGFSCWVLGAEDPKVWDELPVAQR
EHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHCCCCCCC
>Mature Secondary Structure
MIKRLTWMLLALAVACAPTLALAKNPTALFYLMNTQKSTNSFLANVDKIDVVVPTWYGVD
CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHCCCCEEEEEEEEEECCC
QNGLVNGTPNMYLYDIAKQKNLRVMPILSMTTGRDGFHKLMHDEAAKKRMIESLLIHGKQ
CCCEECCCCCEEEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
HKYYGFQFDFENIAWTDRDAYTLMVKQTADALHKAGFKMSVAVVPNAPGHAEGGQFSKWM
CCEEEEEEECCCCEECCCCEEEEEEEHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHH
WEYWRGAYDLKALGQAADLVSIMTYDQHTRWTTPGPVDGMVWMKKHLDYAITQVPKEKLS
HHHHCCCCCHHHHCCHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHH
LGIATYGYRWYTGNPVKEDGTEASNISATYIDADESFPLAIEQNATVQWDPVEQESWFYF
EEEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCEEEECCCCCCCEEEE
YRDDMREWVFRPDARSFKARYDMVKQYGLEGFSCWVLGAEDPKVWDELPVAQR
EHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 10419957 [H]