| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is thiE
Identifier: 66767227
GI number: 66767227
Start: 1080713
End: 1081336
Strand: Reverse
Name: thiE
Synonym: XC_0895
Alternate gene names: 66767227
Gene position: 1081336-1080713 (Counterclockwise)
Preceding gene: 66767229
Following gene: 66767224
Centisome position: 21.0
GC content: 68.59
Gene sequence:
>624_bases ATGCCGACCCTCCAAAACGCCCGCGGCGTCTACCTGATTACCCCCGACACCCGCGACACCGCGCAGTTGCTTGCGTGCAC GTTGCCGCTGCTGCCGCACATCACCTGGTTGCAATACCGCAACAAGCAGGCCGATGCAGCACTGCGCCTGGCCCAGGCCA CCGCACTGCGCGCGGCATGCACCGCGCATGGCGTGCCATTGATCATCAACGACGACGCGGCGCTTGCGCAGCAGGTGGGC GCGGACGGTGTGCACCTGGGTGAAGACGATGGCGAGGTGGCGGCAGCGCGCGCGTTGCTGGGTGCCTCGGCCATCATTGG GGTGTCGTGCTACGACGAGATCGAACGCGCGCGCGCAGCGGCGGCGGCCGGTGCGAACTATGTGGCCTTTGGGGCGTTCT TCCCCACCGCCACCAAGGTGACCACGCGCCGTGCCACGCCTGCATTGCTGCACGAGGCCGCTGCGTTGGGACTGCCACGT GTGGCGATCGGCGGCATCACGCCTTCGCAGGTGCCCGAGCTGGTGACCGCGGGCGCCGACTTGATTGCGGTGGTCAGCGG CGTGTATGCGGCGGCGGACCCGGTCGCCGCAGTGCAGGCGTATCGCGCAGGATTTACGCAGTAG
Upstream 100 bases:
>100_bases CGGTAGGTGGTCGTGGATGTCTCGCTCATCGGATAATCGCGGTCACGCAACGGTGGGGCTGCATTGTCCCATCCCACCCA CCGCTTTCGGAAGCGCTGCC
Downstream 100 bases:
>100_bases CGCAACGAGTGTGAAGCGCTGAGATTTTTATCTCAGCGGTGTCATCTGTTTCAAGACAGCAAGATCTCTTTCGCCGCAGT GCTTGGCTTGAAACGCCAGA
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MPTLQNARGVYLITPDTRDTAQLLACTLPLLPHITWLQYRNKQADAALRLAQATALRAACTAHGVPLIINDDAALAQQVG ADGVHLGEDDGEVAAARALLGASAIIGVSCYDEIERARAAAAAGANYVAFGAFFPTATKVTTRRATPALLHEAAALGLPR VAIGGITPSQVPELVTAGADLIAVVSGVYAAADPVAAVQAYRAGFTQ
Sequences:
>Translated_207_residues MPTLQNARGVYLITPDTRDTAQLLACTLPLLPHITWLQYRNKQADAALRLAQATALRAACTAHGVPLIINDDAALAQQVG ADGVHLGEDDGEVAAARALLGASAIIGVSCYDEIERARAAAAAGANYVAFGAFFPTATKVTTRRATPALLHEAAALGLPR VAIGGITPSQVPELVTAGADLIAVVSGVYAAADPVAAVQAYRAGFTQ >Mature_206_residues PTLQNARGVYLITPDTRDTAQLLACTLPLLPHITWLQYRNKQADAALRLAQATALRAACTAHGVPLIINDDAALAQQVGA DGVHLGEDDGEVAAARALLGASAIIGVSCYDEIERARAAAAAGANYVAFGAFFPTATKVTTRRATPALLHEAAALGLPRV AIGGITPSQVPELVTAGADLIAVVSGVYAAADPVAAVQAYRAGFTQ
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family
Homologues:
Organism=Escherichia coli, GI1790426, Length=132, Percent_Identity=38.6363636363636, Blast_Score=67, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6325042, Length=189, Percent_Identity=31.2169312169312, Blast_Score=88, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): THIE_XANC8 (Q4UYA4)
Other databases:
- EMBL: CP000050 - RefSeq: YP_241989.1 - HSSP: P39594 - ProteinModelPortal: Q4UYA4 - SMR: Q4UYA4 - STRING: Q4UYA4 - GeneID: 3382580 - GenomeReviews: CP000050_GR - KEGG: xcb:XC_0895 - eggNOG: COG0352 - HOGENOM: HBG754477 - OMA: SAICHAE - ProtClustDB: PRK00043 - BioCyc: XCAM314565:XC_0895-MONOMER - HAMAP: MF_00097 - InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00693
Pfam domain/function: PF02581 TMP-TENI; SSF51391 TMP_synthase
EC number: =2.5.1.3
Molecular weight: Translated: 21236; Mature: 21105
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLQNARGVYLITPDTRDTAQLLACTLPLLPHITWLQYRNKQADAALRLAQATALRAAC CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH TAHGVPLIINDDAALAQQVGADGVHLGEDDGEVAAARALLGASAIIGVSCYDEIERARAA HHCCCCEEECCCHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAAGANYVAFGAFFPTATKVTTRRATPALLHEAAALGLPRVAIGGITPSQVPELVTAGAD HHCCCCEEEEECCCCCHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCHH LIAVVSGVYAAADPVAAVQAYRAGFTQ HHHHHHHHHHHCCHHHHHHHHHHCCCC >Mature Secondary Structure PTLQNARGVYLITPDTRDTAQLLACTLPLLPHITWLQYRNKQADAALRLAQATALRAAC CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH TAHGVPLIINDDAALAQQVGADGVHLGEDDGEVAAARALLGASAIIGVSCYDEIERARAA HHCCCCEEECCCHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAAGANYVAFGAFFPTATKVTTRRATPALLHEAAALGLPRVAIGGITPSQVPELVTAGAD HHCCCCEEEEECCCCCHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCHH LIAVVSGVYAAADPVAAVQAYRAGFTQ HHHHHHHHHHHCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA