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The map label for this gene is ompA [H]

Identifier: 66048188

GI number: 66048188

Start: 5887089

End: 5889581

Strand: Direct

Name: ompA [H]

Synonym: Psyr_4964

Alternate gene names: 66048188

Gene position: 5887089-5889581 (Clockwise)

Preceding gene: 66048187

Following gene: 66048189

Centisome position: 96.61

GC content: 59.97

Gene sequence:

>2493_bases
ATGAACAAGATCAAATACTACTTTTTGCGCTACCAGCCCTACGTTCTAGGGGTCTGCTTTTTCCTGGCGATCTTCATCGT
CTGGAGCATCGGCCGTGCCCTGGGCTTCAGCTCGATGAACAGTCTGCTGACGGGGATCGGCCTGTTTCTGCTGTTGTCGG
CAGCCTATGTGCTGTTGCTGTACCGAGGTGTATCACAGCACCAGAACCTGGAAGGCCTGCTGCGTGACGACGCCGATCAG
GCGGTGCTCAACGCCAGCCCGGCAGACCGTGAAGAAGTCAGCCTGCTGCGCGAGCGCCTGCTGCAAAGCCTCGAGCGCCT
GCAGAGCAACAAACCGAACGGCAGCAACTCCAAGGACGCGCTCTACGCCCTGCCCTGGTATCTGGTGGTCGGTCAGCCCG
CAGCGGGCAAAAGCACCATGCTCTATCAGTCGGGCCTCAACTTCCCCTACGCAGAGCGCGAAGGCGCACGCGTGGCCGGG
TTGGGTGGCACGCGCAATTGTGACTGGTTCTTCAGTTCGGAAGCCGTGCTGCTGGACACGGCCGGTCGCTACATGGACGA
TCAGGAAGAAGCCGGCAAATGGCGCGCTTTTCTGCAATTGCTGCGTCAGCACCGCCAGCGCAGACCGCTCAACGGCCTGA
TTGTCACCGTCAGCATTCATGACATCCTGCAGTCCTCGGTGGAGGACCAGGAGCGCATCGCCAAACGTCTGCGCGAGCGC
ATCCAGGAAACCCACGCGCTGCTGGAAGTGCGTCTGCCGGTGTATCTGGTGTTCACCAAGTGCGACCTGGTCCCGGGCTT
CGTGCCGTTCTATCGCCAGCTTGACGATGTGGCGCGTGGCGAAGTGATGGGCAAGACCTTCCCGCACAAGGGCTTCGAGC
AAGCCGACTGGGGCCAGCGCTTCGGTGTGGCGATGGATGAACTGATCAATTACTGGAAACAGATCGCCAACCAGCAACTG
GTGCTTCAGGACATCCAGGTCACTCGTCAGGACACCGCGGTGTATCGCTTCCCGCTGGAGCTGGAAGCCTTGAAACCGCG
CCTGCTCCTGTTCGTCGATGCTCTGCTGCGCGCCAACCCGTATCAAAGCGCCGAGATGCTGCGCGGTTTCTACTTCACCA
GCGCACTGGACGCCGATCAGCCCGAGATGGGCGGACACACCCGCCAGGTCACTGAGCGATTCCAGCTGGAAAGCGAGCAG
GAAGCTGTCGATGGCAATGTCCAGCCGCACCCGCTGTTCATCAACAGCCTGTTCCGCAAGGTAATCATCCCCGATCAGCA
TCTGGTGGCGCTGTACACCACCAACCACCGCGAGCGGCGCCGCAAGGCCGCCTGGATCGGTGGCGCAAGCCTTGTGGCGT
TGCTGCTGTGCAGTCTGTGGGGCTGGTCGTACTGGAACAACAAGGACAACATCCAGTCCATCTCCAGCGAACTCGCTCAG
GCCGCAGCCGAGGACAGCAAGGCCACCGGGCAGTACACCGAGTGGCAAACGCTGGATCGCATGCGCTTCTGGACTTCGCT
TTACTACGATCGTCATCACGACGAAGGCGTACCACTGCGCTTGCGTCTGGGTCTCTACCGGGGCTATGACGTCGAGCCGC
TGCTGCGCACGCGTTACTTCAACCGTCTGGAAACGGTGATGCTCAAACCGACCGCAGACAACCTGACGCGCTCGCTTTAC
CTGCTGACCACCATCAAGGTCTACCAGCGTAATGCCAAGGACCTGATGCCGGTCACCGGCGTCGACAGTGTCGAGCCCAA
GGCGCTGCCGCCGGATAACCGCGCGCAATCCATCGCCGCCTTCGGCAAGGCCACGCTGGACACTTACGTGATGTTGTCGC
GCGCCCAGCGTGAAAAGGCCGACCCGGCGTTCCTGAAAGCGAAGATGCCTGATTACTGGTACCCGGCCATCGCGCGTCAG
ACTGGCAAGACCATCACCGCGAATGCCGAGGCAGGCTCCAATCAGGATTACGAGTACGCCAGCCGACAGATCAACTTCTA
CAGCGATCAGATTCACGAGCTGGACGTGCCACGGATTCTCGACAACGCATTTCTGACATCCAGCTCGCGTAATTACATCA
ACAGCCTGTTGACGCAGTCGTTGAAGGCTATCGAAACGATCACGCTGGAATCGGACACGCTGTTTGCCTTTGGTCGTGCC
GATTTCCAGAGCCTTAAAACCGAAGGTCAAAATCAGTTGAGCGCGATCGCCGGCAAGCTGTTGAGTACACCGAACATCGG
CAAGATCGTGATTGCAGGTCACGCCGACCAGTTGGGCGACCCGCAAAGCAACATGCAGGTGTCCAAACAGCGTGCGCAGA
CCATCAAGACTTACCTGGTCGGCAAGGGCGTGCCCGCCGAGCTGGTGGACGCGATCGGTGAAGGCAGCGAGAAGCCTCTG
GTCAAATGCGACATGCAGCAACCCAGAGCGCAGTTGATTCAGTGCCTTGAGCCGAATCGACGCGTGGAGATCGAAGTACG
CGCGCTCAATTGA

Upstream 100 bases:

>100_bases
CGTTCGACGAACACCACCGAGGCCATGTGTTTCCAGACATTGACCGCCCTCTTTATGACGTTATCGACCGCTTTGTCGAT
GTGCTGGATTTGAAGCCCGT

Downstream 100 bases:

>100_bases
TCGCGCGTTGGCAAGCAAACCGAAGCCCGGGTTGTCCCTATGAAACCTTGGCCGTGGCAAGAGAACCTTTCTTGATCGTT
TCAGGAAGGTTAATCAAAAG

Product: OmpA/MotB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 830; Mature: 830

Protein sequence:

>830_residues
MNKIKYYFLRYQPYVLGVCFFLAIFIVWSIGRALGFSSMNSLLTGIGLFLLLSAAYVLLLYRGVSQHQNLEGLLRDDADQ
AVLNASPADREEVSLLRERLLQSLERLQSNKPNGSNSKDALYALPWYLVVGQPAAGKSTMLYQSGLNFPYAEREGARVAG
LGGTRNCDWFFSSEAVLLDTAGRYMDDQEEAGKWRAFLQLLRQHRQRRPLNGLIVTVSIHDILQSSVEDQERIAKRLRER
IQETHALLEVRLPVYLVFTKCDLVPGFVPFYRQLDDVARGEVMGKTFPHKGFEQADWGQRFGVAMDELINYWKQIANQQL
VLQDIQVTRQDTAVYRFPLELEALKPRLLLFVDALLRANPYQSAEMLRGFYFTSALDADQPEMGGHTRQVTERFQLESEQ
EAVDGNVQPHPLFINSLFRKVIIPDQHLVALYTTNHRERRRKAAWIGGASLVALLLCSLWGWSYWNNKDNIQSISSELAQ
AAAEDSKATGQYTEWQTLDRMRFWTSLYYDRHHDEGVPLRLRLGLYRGYDVEPLLRTRYFNRLETVMLKPTADNLTRSLY
LLTTIKVYQRNAKDLMPVTGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIARQ
TGKTITANAEAGSNQDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLTQSLKAIETITLESDTLFAFGRA
DFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQLGDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAIGEGSEKPL
VKCDMQQPRAQLIQCLEPNRRVEIEVRALN

Sequences:

>Translated_830_residues
MNKIKYYFLRYQPYVLGVCFFLAIFIVWSIGRALGFSSMNSLLTGIGLFLLLSAAYVLLLYRGVSQHQNLEGLLRDDADQ
AVLNASPADREEVSLLRERLLQSLERLQSNKPNGSNSKDALYALPWYLVVGQPAAGKSTMLYQSGLNFPYAEREGARVAG
LGGTRNCDWFFSSEAVLLDTAGRYMDDQEEAGKWRAFLQLLRQHRQRRPLNGLIVTVSIHDILQSSVEDQERIAKRLRER
IQETHALLEVRLPVYLVFTKCDLVPGFVPFYRQLDDVARGEVMGKTFPHKGFEQADWGQRFGVAMDELINYWKQIANQQL
VLQDIQVTRQDTAVYRFPLELEALKPRLLLFVDALLRANPYQSAEMLRGFYFTSALDADQPEMGGHTRQVTERFQLESEQ
EAVDGNVQPHPLFINSLFRKVIIPDQHLVALYTTNHRERRRKAAWIGGASLVALLLCSLWGWSYWNNKDNIQSISSELAQ
AAAEDSKATGQYTEWQTLDRMRFWTSLYYDRHHDEGVPLRLRLGLYRGYDVEPLLRTRYFNRLETVMLKPTADNLTRSLY
LLTTIKVYQRNAKDLMPVTGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIARQ
TGKTITANAEAGSNQDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLTQSLKAIETITLESDTLFAFGRA
DFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQLGDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAIGEGSEKPL
VKCDMQQPRAQLIQCLEPNRRVEIEVRALN
>Mature_830_residues
MNKIKYYFLRYQPYVLGVCFFLAIFIVWSIGRALGFSSMNSLLTGIGLFLLLSAAYVLLLYRGVSQHQNLEGLLRDDADQ
AVLNASPADREEVSLLRERLLQSLERLQSNKPNGSNSKDALYALPWYLVVGQPAAGKSTMLYQSGLNFPYAEREGARVAG
LGGTRNCDWFFSSEAVLLDTAGRYMDDQEEAGKWRAFLQLLRQHRQRRPLNGLIVTVSIHDILQSSVEDQERIAKRLRER
IQETHALLEVRLPVYLVFTKCDLVPGFVPFYRQLDDVARGEVMGKTFPHKGFEQADWGQRFGVAMDELINYWKQIANQQL
VLQDIQVTRQDTAVYRFPLELEALKPRLLLFVDALLRANPYQSAEMLRGFYFTSALDADQPEMGGHTRQVTERFQLESEQ
EAVDGNVQPHPLFINSLFRKVIIPDQHLVALYTTNHRERRRKAAWIGGASLVALLLCSLWGWSYWNNKDNIQSISSELAQ
AAAEDSKATGQYTEWQTLDRMRFWTSLYYDRHHDEGVPLRLRLGLYRGYDVEPLLRTRYFNRLETVMLKPTADNLTRSLY
LLTTIKVYQRNAKDLMPVTGVDSVEPKALPPDNRAQSIAAFGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIARQ
TGKTITANAEAGSNQDYEYASRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLTQSLKAIETITLESDTLFAFGRA
DFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQLGDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAIGEGSEKPL
VKCDMQQPRAQLIQCLEPNRRVEIEVRALN

Specific function: Required for the action of colicins K and L and for the stabilization of mating aggregates in conjugation. Serves as a receptor for a number of T-even like phages. Also acts as a porin with low permeability that allows slow penetration of small solutes [H

COG id: COG3523

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787191, Length=126, Percent_Identity=41.2698412698413, Blast_Score=97, Evalue=5e-21,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR006664
- InterPro:   IPR002368
- InterPro:   IPR006690
- InterPro:   IPR000498
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA; PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 94226; Mature: 94226

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIKYYFLRYQPYVLGVCFFLAIFIVWSIGRALGFSSMNSLLTGIGLFLLLSAAYVLLL
CCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRGVSQHQNLEGLLRDDADQAVLNASPADREEVSLLRERLLQSLERLQSNKPNGSNSKDA
HHHHHHCCCCHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE
LYALPWYLVVGQPAAGKSTMLYQSGLNFPYAEREGARVAGLGGTRNCDWFFSSEAVLLDT
EEEECEEEEECCCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCEEECCCEEEEEC
AGRYMDDQEEAGKWRAFLQLLRQHRQRRPLNGLIVTVSIHDILQSSVEDQERIAKRLRER
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
IQETHALLEVRLPVYLVFTKCDLVPGFVPFYRQLDDVARGEVMGKTFPHKGFEQADWGQR
HHHHHHHHHCCCCEEEEEEHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
FGVAMDELINYWKQIANQQLVLQDIQVTRQDTAVYRFPLELEALKPRLLLFVDALLRANP
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCHHHHCHHHHHHHHHHHHCCC
YQSAEMLRGFYFTSALDADQPEMGGHTRQVTERFQLESEQEAVDGNVQPHPLFINSLFRK
CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHH
VIIPDQHLVALYTTNHRERRRKAAWIGGASLVALLLCSLWGWSYWNNKDNIQSISSELAQ
HCCCCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
AAAEDSKATGQYTEWQTLDRMRFWTSLYYDRHHDEGVPLRLRLGLYRGYDVEPLLRTRYF
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHH
NRLETVMLKPTADNLTRSLYLLTTIKVYQRNAKDLMPVTGVDSVEPKALPPDNRAQSIAA
HHHHHEEECCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
FGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIARQTGKTITANAEAGSNQDYEYA
HHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCHHHHHHCCCEEEECCCCCCCCCHHHH
SRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLTQSLKAIETITLESDTLFAFGRA
HHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCEEEECCH
DFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQLGDPQSNMQVSKQRAQTIKTYLV
HHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCHHCCCCHHHHHHHHHHHHHHHHHHH
GKGVPAELVDAIGEGSEKPLVKCDMQQPRAQLIQCLEPNRRVEIEVRALN
CCCCCHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHCCCCEEEEEEEECC
>Mature Secondary Structure
MNKIKYYFLRYQPYVLGVCFFLAIFIVWSIGRALGFSSMNSLLTGIGLFLLLSAAYVLLL
CCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRGVSQHQNLEGLLRDDADQAVLNASPADREEVSLLRERLLQSLERLQSNKPNGSNSKDA
HHHHHHCCCCHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE
LYALPWYLVVGQPAAGKSTMLYQSGLNFPYAEREGARVAGLGGTRNCDWFFSSEAVLLDT
EEEECEEEEECCCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCEEECCCEEEEEC
AGRYMDDQEEAGKWRAFLQLLRQHRQRRPLNGLIVTVSIHDILQSSVEDQERIAKRLRER
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
IQETHALLEVRLPVYLVFTKCDLVPGFVPFYRQLDDVARGEVMGKTFPHKGFEQADWGQR
HHHHHHHHHCCCCEEEEEEHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
FGVAMDELINYWKQIANQQLVLQDIQVTRQDTAVYRFPLELEALKPRLLLFVDALLRANP
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCHHHHCHHHHHHHHHHHHCCC
YQSAEMLRGFYFTSALDADQPEMGGHTRQVTERFQLESEQEAVDGNVQPHPLFINSLFRK
CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHH
VIIPDQHLVALYTTNHRERRRKAAWIGGASLVALLLCSLWGWSYWNNKDNIQSISSELAQ
HCCCCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
AAAEDSKATGQYTEWQTLDRMRFWTSLYYDRHHDEGVPLRLRLGLYRGYDVEPLLRTRYF
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHH
NRLETVMLKPTADNLTRSLYLLTTIKVYQRNAKDLMPVTGVDSVEPKALPPDNRAQSIAA
HHHHHEEECCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
FGKATLDTYVMLSRAQREKADPAFLKAKMPDYWYPAIARQTGKTITANAEAGSNQDYEYA
HHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCHHHHHHCCCEEEECCCCCCCCCHHHH
SRQINFYSDQIHELDVPRILDNAFLTSSSRNYINSLLTQSLKAIETITLESDTLFAFGRA
HHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCEEEECCH
DFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQLGDPQSNMQVSKQRAQTIKTYLV
HHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCHHCCCCHHHHHHHHHHHHHHHHHHH
GKGVPAELVDAIGEGSEKPLVKCDMQQPRAQLIQCLEPNRRVEIEVRALN
CCCCCHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]