Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

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The map label for this gene is 66048187

Identifier: 66048187

GI number: 66048187

Start: 5886169

End: 5887092

Strand: Direct

Name: 66048187

Synonym: Psyr_4963

Alternate gene names: NA

Gene position: 5886169-5887092 (Clockwise)

Preceding gene: 66048186

Following gene: 66048188

Centisome position: 96.59

GC content: 59.42

Gene sequence:

>924_bases
ATGATTGGCTGCTTCGGAAAAGTGCCCGCGAGCGCAGATTTCGTCAGCCTGCACGGGGCCAGCGACGATGTTTGCGAGTT
CGATGCATGGCTGCAGGGCGCACTCGCCGACATGCAGCACCGCGAAGACTGGCGCACGCTGTTCGATCGATTGCCCGTGT
GCTTTTTCAGCTACCGGGCACGCAGCGGCAACTGGCTGGTGGGCGGTTTGATCAGTTCCAGGGACTCAAGCGCTCGGCGT
TATCCGTTCTTCATCTTTCAAACGGTGAAGTCCAGTGACGCCGGGCTGTTTGTGAACCCTTTCACCCTGAGCGAACTGTT
CGCCGGGCAGATCAAACCGCTGCTGCACATGGCCGCGCAAGGCGAAAGCACGGCGGTGCTGTTCGAACGCATCAGGGCCT
TGCGACCGCTGCAAGGTCAGGATTTCGAGCTGTTCAGGCGTGTGCATGAGAAGTTTCTGGTGAACTTCACCCTGCGCGAC
ATCGCGACCTCGCTGGAAAGCTCCTACCCGGAGTTCATCAGCAACGCCGTGCTCACCAGGCTGCAGGCGCTGAGCCGTCC
GTCGTCCAAGGCACCCGTTGGTATTTCACTGCCACTGCCGGCAGAACGAGGCTTGAAGAACCCGACAGCCGATCTGTGGG
TCAACTGGCTGACACGCATCGAACCGAACAGGGCGGTGCCGCAGATCAGCATTCTGGCGGATGATTTCATGCGCCCCCGG
CTGTTCTGCTTTGCATCCCGCAACACCTCCGGCGTGTACCGGGTGGTGACGGGCGTGAGTGAGCATTCGGAGAGTTATGA
CGTACTGGCACCCTTCGACACGTTCGACGAACACCACCGAGGCCATGTGTTTCCAGACATTGACCGCCCTCTTTATGACG
TTATCGACCGCTTTGTCGATGTGCTGGATTTGAAGCCCGTATGA

Upstream 100 bases:

>100_bases
AAGCTGACCGACCTGGCCAACGTCAAGGCGCTGAGCGCGCTTAACGCAACCGATGGGCGGACCAAGTGAGGATGCACATG
CTGGATCTGGAGGGCGGTCG

Downstream 100 bases:

>100_bases
ACAAGATCAAATACTACTTTTTGCGCTACCAGCCCTACGTTCTAGGGGTCTGCTTTTTCCTGGCGATCTTCATCGTCTGG
AGCATCGGCCGTGCCCTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MIGCFGKVPASADFVSLHGASDDVCEFDAWLQGALADMQHREDWRTLFDRLPVCFFSYRARSGNWLVGGLISSRDSSARR
YPFFIFQTVKSSDAGLFVNPFTLSELFAGQIKPLLHMAAQGESTAVLFERIRALRPLQGQDFELFRRVHEKFLVNFTLRD
IATSLESSYPEFISNAVLTRLQALSRPSSKAPVGISLPLPAERGLKNPTADLWVNWLTRIEPNRAVPQISILADDFMRPR
LFCFASRNTSGVYRVVTGVSEHSESYDVLAPFDTFDEHHRGHVFPDIDRPLYDVIDRFVDVLDLKPV

Sequences:

>Translated_307_residues
MIGCFGKVPASADFVSLHGASDDVCEFDAWLQGALADMQHREDWRTLFDRLPVCFFSYRARSGNWLVGGLISSRDSSARR
YPFFIFQTVKSSDAGLFVNPFTLSELFAGQIKPLLHMAAQGESTAVLFERIRALRPLQGQDFELFRRVHEKFLVNFTLRD
IATSLESSYPEFISNAVLTRLQALSRPSSKAPVGISLPLPAERGLKNPTADLWVNWLTRIEPNRAVPQISILADDFMRPR
LFCFASRNTSGVYRVVTGVSEHSESYDVLAPFDTFDEHHRGHVFPDIDRPLYDVIDRFVDVLDLKPV
>Mature_307_residues
MIGCFGKVPASADFVSLHGASDDVCEFDAWLQGALADMQHREDWRTLFDRLPVCFFSYRARSGNWLVGGLISSRDSSARR
YPFFIFQTVKSSDAGLFVNPFTLSELFAGQIKPLLHMAAQGESTAVLFERIRALRPLQGQDFELFRRVHEKFLVNFTLRD
IATSLESSYPEFISNAVLTRLQALSRPSSKAPVGISLPLPAERGLKNPTADLWVNWLTRIEPNRAVPQISILADDFMRPR
LFCFASRNTSGVYRVVTGVSEHSESYDVLAPFDTFDEHHRGHVFPDIDRPLYDVIDRFVDVLDLKPV

Specific function: Unknown

COG id: COG3913

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34734; Mature: 34734

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGCFGKVPASADFVSLHGASDDVCEFDAWLQGALADMQHREDWRTLFDRLPVCFFSYRA
CCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC
RSGNWLVGGLISSRDSSARRYPFFIFQTVKSSDAGLFVNPFTLSELFAGQIKPLLHMAAQ
CCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHC
GESTAVLFERIRALRPLQGQDFELFRRVHEKFLVNFTLRDIATSLESSYPEFISNAVLTR
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LQALSRPSSKAPVGISLPLPAERGLKNPTADLWVNWLTRIEPNRAVPQISILADDFMRPR
HHHHCCCCCCCCEEEECCCCHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCE
LFCFASRNTSGVYRVVTGVSEHSESYDVLAPFDTFDEHHRGHVFPDIDRPLYDVIDRFVD
EEEEECCCCCCHHHHHHCHHHCCCCCCEEECCHHHHHCCCCCCCCCCCCHHHHHHHHHHH
VLDLKPV
HHCCCCC
>Mature Secondary Structure
MIGCFGKVPASADFVSLHGASDDVCEFDAWLQGALADMQHREDWRTLFDRLPVCFFSYRA
CCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC
RSGNWLVGGLISSRDSSARRYPFFIFQTVKSSDAGLFVNPFTLSELFAGQIKPLLHMAAQ
CCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHC
GESTAVLFERIRALRPLQGQDFELFRRVHEKFLVNFTLRDIATSLESSYPEFISNAVLTR
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LQALSRPSSKAPVGISLPLPAERGLKNPTADLWVNWLTRIEPNRAVPQISILADDFMRPR
HHHHCCCCCCCCEEEECCCCHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCE
LFCFASRNTSGVYRVVTGVSEHSESYDVLAPFDTFDEHHRGHVFPDIDRPLYDVIDRFVD
EEEEECCCCCCHHHHHHCHHHCCCCCCEEECCHHHHHCCCCCCCCCCCCHHHHHHHHHHH
VLDLKPV
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA