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The map label for this gene is ctpA [H]

Identifier: 66048111

GI number: 66048111

Start: 5797351

End: 5798688

Strand: Direct

Name: ctpA [H]

Synonym: Psyr_4887

Alternate gene names: 66048111

Gene position: 5797351-5798688 (Clockwise)

Preceding gene: 66048110

Following gene: 66048112

Centisome position: 95.14

GC content: 62.93

Gene sequence:

>1338_bases
ATGCTGCATTTGTCCCGCCTCACCTCGCTGGCCCTGGCAATTGCCATCGTTATCGGCGCGCCTCTGGCGCAAGCTGCCGA
AAAGACCGCGCCAGCCACGCCTGCAGCAGTCTCGCCCGCCAAAACCAACGCCACCGCAAAGCCGCCGCTGCCGCTCGACG
AGTTGCGCACCTTTGCCGAGGTCATGGACCGGGTCAAGGCGGCCTACGTGGAGCCGGTCGACGACAAGACTCTGCTGGAG
AACGCCATCAAAGGCATGCTCAGCAACCTTGATCCGCACTCTGCCTACCTCGGCCCGGAAGATTTCCAGGAGCTGCAGGA
AAGCACCAGCGGCGAGTTCGGTGGGCTGGGCATCGAAGTCGGCGTCGAGGACGGTTTCGTCAAGGTGGTTTCGCCCATCG
ACGACACACCGGCTTCCAAGGCTGGCATCGAGGCAGGCGACCTGATCGTGAAGATCAACGGTACGCCGACCCAGGGCCAG
AACATGCAGGAAGCGGTCGACAAGATGCGCGGCAAGATCGGCGAAAAGATCACCCTGACGCTGGTCCGCGATGGCGGCAC
GCCGTTTGACGTGACCCTGGCGCGGGCAACCATTCAGGTCAAGAGCGTCAAGGCGCAGATGCTGGAAAATGGCTACGGCT
ATATCCGCATCACCCAGTTCCAGGTCAAGACCGGTGACGAAGTCGGCAAGGCGCTGGCCAAATTCCGCAAGGACAACGGC
AAGAAGATGAGCGGCCTGATTCTCGACCTGCGCAACAACCCGGGCGGCGTGCTGCAATCGGCCGTGCAGGTGGCGGATCA
CTTCCTCACCAAAGGCCTGATCGTCTACACCAAAGGCCGCATTGCTAACTCCGAACTGCGCTTCTCGGCAGACCCGGCAG
ACGCCAGCGAAGGCGTGCCACTGGTGGTGCTGATCAACGGCGGCAGCGCCTCGGCATCGGAAATCGTTGCCGGTGCCCTG
CAAGACCAGAAACGCGGCATCCTGATGGGCACTGACACCTTCGGCAAAGGCTCGGTGCAGACCGTCCTGCCGCTGAACAA
CGATCGCGCCCTGAAGATCACTACCGCGTTGTACTACACGCCGAACGGCCGCTCGATCCAGGCCCAGGGCATCAACCCGG
ACATCGTGGTACGTCGGGCCAAGGTCACCAACGAAGCGGACGGCGAGAACTACAAGGAAGCCGACCTGCTGGGTCACCTG
GGCAATGGCAACGGCGGCGCAGACAAACCGACCGTCAAGAGTGGCGCAGCCGCCAAGGCGCGTCCGCAGGATGACGACTT
CCAGCTCAGCCAGGCGCTCAGCCTGCTCAAGGGGCTGAGTATCACCCGCGGCAACTGA

Upstream 100 bases:

>100_bases
GTACTTTGCTATTCGTCAGCAGGGTCGCCCCAGCGATCCGGCCCAATGGTGCCGCACTCAAGGATAAGTCGGCGTCAATA
TCTGTAGGAGTTCGTTAGAC

Downstream 100 bases:

>100_bases
CGGATGCGCTTTCTAACTTTGTTATTGCTGACCCTCTCGATCACTGGCGCTGCCCATGCAGCGCCAGCCGAGAACAGCGG
CAAACCGTCCAAGGCCTACC

Product: peptidase S41A, C-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MLHLSRLTSLALAIAIVIGAPLAQAAEKTAPATPAAVSPAKTNATAKPPLPLDELRTFAEVMDRVKAAYVEPVDDKTLLE
NAIKGMLSNLDPHSAYLGPEDFQELQESTSGEFGGLGIEVGVEDGFVKVVSPIDDTPASKAGIEAGDLIVKINGTPTQGQ
NMQEAVDKMRGKIGEKITLTLVRDGGTPFDVTLARATIQVKSVKAQMLENGYGYIRITQFQVKTGDEVGKALAKFRKDNG
KKMSGLILDLRNNPGGVLQSAVQVADHFLTKGLIVYTKGRIANSELRFSADPADASEGVPLVVLINGGSASASEIVAGAL
QDQKRGILMGTDTFGKGSVQTVLPLNNDRALKITTALYYTPNGRSIQAQGINPDIVVRRAKVTNEADGENYKEADLLGHL
GNGNGGADKPTVKSGAAAKARPQDDDFQLSQALSLLKGLSITRGN

Sequences:

>Translated_445_residues
MLHLSRLTSLALAIAIVIGAPLAQAAEKTAPATPAAVSPAKTNATAKPPLPLDELRTFAEVMDRVKAAYVEPVDDKTLLE
NAIKGMLSNLDPHSAYLGPEDFQELQESTSGEFGGLGIEVGVEDGFVKVVSPIDDTPASKAGIEAGDLIVKINGTPTQGQ
NMQEAVDKMRGKIGEKITLTLVRDGGTPFDVTLARATIQVKSVKAQMLENGYGYIRITQFQVKTGDEVGKALAKFRKDNG
KKMSGLILDLRNNPGGVLQSAVQVADHFLTKGLIVYTKGRIANSELRFSADPADASEGVPLVVLINGGSASASEIVAGAL
QDQKRGILMGTDTFGKGSVQTVLPLNNDRALKITTALYYTPNGRSIQAQGINPDIVVRRAKVTNEADGENYKEADLLGHL
GNGNGGADKPTVKSGAAAKARPQDDDFQLSQALSLLKGLSITRGN
>Mature_445_residues
MLHLSRLTSLALAIAIVIGAPLAQAAEKTAPATPAAVSPAKTNATAKPPLPLDELRTFAEVMDRVKAAYVEPVDDKTLLE
NAIKGMLSNLDPHSAYLGPEDFQELQESTSGEFGGLGIEVGVEDGFVKVVSPIDDTPASKAGIEAGDLIVKINGTPTQGQ
NMQEAVDKMRGKIGEKITLTLVRDGGTPFDVTLARATIQVKSVKAQMLENGYGYIRITQFQVKTGDEVGKALAKFRKDNG
KKMSGLILDLRNNPGGVLQSAVQVADHFLTKGLIVYTKGRIANSELRFSADPADASEGVPLVVLINGGSASASEIVAGAL
QDQKRGILMGTDTFGKGSVQTVLPLNNDRALKITTALYYTPNGRSIQAQGINPDIVVRRAKVTNEADGENYKEADLLGHL
GNGNGGADKPTVKSGAAAKARPQDDDFQLSQALSLLKGLSITRGN

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=382, Percent_Identity=30.1047120418848, Blast_Score=124, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 46878; Mature: 46878

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHLSRLTSLALAIAIVIGAPLAQAAEKTAPATPAAVSPAKTNATAKPPLPLDELRTFAE
CCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
VMDRVKAAYVEPVDDKTLLENAIKGMLSNLDPHSAYLGPEDFQELQESTSGEFGGLGIEV
HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEE
GVEDGFVKVVSPIDDTPASKAGIEAGDLIVKINGTPTQGQNMQEAVDKMRGKIGEKITLT
ECCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEE
LVRDGGTPFDVTLARATIQVKSVKAQMLENGYGYIRITQFQVKTGDEVGKALAKFRKDNG
EEECCCCCEEEEEEEEEEEHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHCCC
KKMSGLILDLRNNPGGVLQSAVQVADHFLTKGLIVYTKGRIANSELRFSADPADASEGVP
CEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEECCCEECCCEEEECCCCCCCCCCE
LVVLINGGSASASEIVAGALQDQKRGILMGTDTFGKGSVQTVLPLNNDRALKITTALYYT
EEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCEEEEEEEEEEC
PNGRSIQAQGINPDIVVRRAKVTNEADGENYKEADLLGHLGNGNGGADKPTVKSGAAAKA
CCCCEEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHEECCCCCCCCCCCCCCCCCCCCC
RPQDDDFQLSQALSLLKGLSITRGN
CCCCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLHLSRLTSLALAIAIVIGAPLAQAAEKTAPATPAAVSPAKTNATAKPPLPLDELRTFAE
CCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
VMDRVKAAYVEPVDDKTLLENAIKGMLSNLDPHSAYLGPEDFQELQESTSGEFGGLGIEV
HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEE
GVEDGFVKVVSPIDDTPASKAGIEAGDLIVKINGTPTQGQNMQEAVDKMRGKIGEKITLT
ECCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEE
LVRDGGTPFDVTLARATIQVKSVKAQMLENGYGYIRITQFQVKTGDEVGKALAKFRKDNG
EEECCCCCEEEEEEEEEEEHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHCCC
KKMSGLILDLRNNPGGVLQSAVQVADHFLTKGLIVYTKGRIANSELRFSADPADASEGVP
CEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEECCCEECCCEEEECCCCCCCCCCE
LVVLINGGSASASEIVAGALQDQKRGILMGTDTFGKGSVQTVLPLNNDRALKITTALYYT
EEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCEEEEEEEEEEC
PNGRSIQAQGINPDIVVRRAKVTNEADGENYKEADLLGHLGNGNGGADKPTVKSGAAAKA
CCCCEEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHEECCCCCCCCCCCCCCCCCCCCC
RPQDDDFQLSQALSLLKGLSITRGN
CCCCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]