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The map label for this gene is yibQ [H]

Identifier: 66048112

GI number: 66048112

Start: 5798692

End: 5799474

Strand: Direct

Name: yibQ [H]

Synonym: Psyr_4888

Alternate gene names: 66048112

Gene position: 5798692-5799474 (Clockwise)

Preceding gene: 66048111

Following gene: 66048113

Centisome position: 95.16

GC content: 62.84

Gene sequence:

>783_bases
ATGCGCTTTCTAACTTTGTTATTGCTGACCCTCTCGATCACTGGCGCTGCCCATGCAGCGCCAGCCGAGAACAGCGGCAA
ACCGTCCAAGGCCTACCTGAGCCTGATCATCGATGACCTGGGCCAGAATCCGCAGCGCGACAGCCGCACACTGGCGCTTC
CCGGCCCGGTCACCCTGGCAATCATGCCCGACACCCCGCATGCCACCGAGTTTGCCCGCCAGGCCCATCGCGCAGGCAAA
ACGGTCATGCTGCACATGCCCATGGACCCCGCGACCGGTCCTTACGCCTGGCACCCCGAGCTGCCACTGCCTGAGCTGGA
AAGCCGTCTCAATGCTGCCCTGCTGAAAGTGCCGTACGCAGCCGGTATCAACAACCACATGGGCAGCCGGATGACCGCCG
AGCCGGTCGCCATGACCTGGCTGATGGCCGAGCTACAGCGTCGTCACCTGTTTTTCGTCGACAGCCGCACCAGCGCGAAA
ACCGTGGCGGCCGCCGAAGCGCAGCGCATCGGTCTGGCCAGCGTCTCGCGTGACGTATTCCTGGACGACGAACGCACTGC
AGAAGCCATCACCCGCCAATTGCAGACCGCGATAAAAATCGCCCGCAAATATGGCTCGGCCGTGGTTATCGGCCACCCCT
ACCCTGTCACGCTGGACGTACTGGAACGCGAACTGCCCAACCTCAAAGCGCAAGGCGTCGAATGGATCGACCTGCGCAGC
ATGATCGGCGAACGCGGCAATCAGGCGAGTGCGGCGCATGGCAAGAACGGGATTTATCGCTGA

Upstream 100 bases:

>100_bases
TGGCGCAGCCGCCAAGGCGCGTCCGCAGGATGACGACTTCCAGCTCAGCCAGGCGCTCAGCCTGCTCAAGGGGCTGAGTA
TCACCCGCGGCAACTGACGG

Downstream 100 bases:

>100_bases
CGCAGCAAACCACTGCACCGCCCTGTCAGTTCTGTCAGTACCTTCCAAGCAAGGACAGGCCCACACTGCGCTTACTCGGT
TTGGGCAGTATGGACATCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MRFLTLLLLTLSITGAAHAAPAENSGKPSKAYLSLIIDDLGQNPQRDSRTLALPGPVTLAIMPDTPHATEFARQAHRAGK
TVMLHMPMDPATGPYAWHPELPLPELESRLNAALLKVPYAAGINNHMGSRMTAEPVAMTWLMAELQRRHLFFVDSRTSAK
TVAAAEAQRIGLASVSRDVFLDDERTAEAITRQLQTAIKIARKYGSAVVIGHPYPVTLDVLERELPNLKAQGVEWIDLRS
MIGERGNQASAAHGKNGIYR

Sequences:

>Translated_260_residues
MRFLTLLLLTLSITGAAHAAPAENSGKPSKAYLSLIIDDLGQNPQRDSRTLALPGPVTLAIMPDTPHATEFARQAHRAGK
TVMLHMPMDPATGPYAWHPELPLPELESRLNAALLKVPYAAGINNHMGSRMTAEPVAMTWLMAELQRRHLFFVDSRTSAK
TVAAAEAQRIGLASVSRDVFLDDERTAEAITRQLQTAIKIARKYGSAVVIGHPYPVTLDVLERELPNLKAQGVEWIDLRS
MIGERGNQASAAHGKNGIYR
>Mature_260_residues
MRFLTLLLLTLSITGAAHAAPAENSGKPSKAYLSLIIDDLGQNPQRDSRTLALPGPVTLAIMPDTPHATEFARQAHRAGK
TVMLHMPMDPATGPYAWHPELPLPELESRLNAALLKVPYAAGINNHMGSRMTAEPVAMTWLMAELQRRHLFFVDSRTSAK
TVAAAEAQRIGLASVSRDVFLDDERTAEAITRQLQTAIKIARKYGSAVVIGHPYPVTLDVLERELPNLKAQGVEWIDLRS
MIGERGNQASAAHGKNGIYR

Specific function: Unknown

COG id: COG2861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0755 [H]

Homologues:

Organism=Escherichia coli, GI87082298, Length=200, Percent_Identity=41, Blast_Score=168, Evalue=4e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006837
- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF04748 Polysacc_deac_2 [H]

EC number: NA

Molecular weight: Translated: 28411; Mature: 28411

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLTLLLLTLSITGAAHAAPAENSGKPSKAYLSLIIDDLGQNPQRDSRTLALPGPVTLA
CHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEE
IMPDTPHATEFARQAHRAGKTVMLHMPMDPATGPYAWHPELPLPELESRLNAALLKVPYA
EECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHH
AGINNHMGSRMTAEPVAMTWLMAELQRRHLFFVDSRTSAKTVAAAEAQRIGLASVSRDVF
HCCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEE
LDDERTAEAITRQLQTAIKIARKYGSAVVIGHPYPVTLDVLERELPNLKAQGVEWIDLRS
ECCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHCCCCHHCCCHHHHHHH
MIGERGNQASAAHGKNGIYR
HHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRFLTLLLLTLSITGAAHAAPAENSGKPSKAYLSLIIDDLGQNPQRDSRTLALPGPVTLA
CHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEE
IMPDTPHATEFARQAHRAGKTVMLHMPMDPATGPYAWHPELPLPELESRLNAALLKVPYA
EECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHH
AGINNHMGSRMTAEPVAMTWLMAELQRRHLFFVDSRTSAKTVAAAEAQRIGLASVSRDVF
HCCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEE
LDDERTAEAITRQLQTAIKIARKYGSAVVIGHPYPVTLDVLERELPNLKAQGVEWIDLRS
ECCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHCCCCHHCCCHHHHHHH
MIGERGNQASAAHGKNGIYR
HHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]