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The map label for this gene is 66048093

Identifier: 66048093

GI number: 66048093

Start: 5780152

End: 5780826

Strand: Direct

Name: 66048093

Synonym: Psyr_4869

Alternate gene names: NA

Gene position: 5780152-5780826 (Clockwise)

Preceding gene: 66048092

Following gene: 66048103

Centisome position: 94.85

GC content: 61.19

Gene sequence:

>675_bases
ATGCCTGCAGCCCAACCAAGAGCCACGCCCATGACACGCGCCGCCACTCCTCGCAAACCTCAAGCACGCAGCCAGGCCAG
AATCGATTCGATTCTCGACGCCGCCCGCACGCTGCTTGCCGAACAAGGAGTGGCCAGCCTGTCGATTTACAGCGTTGCCG
AGCGCGCCGGCATTCCGCCCTCGTCGGTGTACCACTTCTTCGCCAGCGTCCCCGCGCTGCTTGAAGCACTGACCGCCGAC
ATCCACGCCGCCTTTCGCGCCTCGCTGCAGGCACCCATCGATCACGACCAGCTCACCACCTGGCGCGATCTGTCACGCAT
CGTCGAGCTGCGCATGCTGGCCATCTACAACGCCGACGCCGCCGCCCGCCAATTGATCCTCGCCCAGCACGGCCTGACCG
AAATCAACCAGGCCGACCGACAGCACGACATTGAACTGGGGCACTTGATGCTTGAAGTGTTTGACCGCCACTTCCAGCTG
CCCGCGTTACCGGACGATGTAGACGTATTTGCGCTGGCCATGGAACTGGGGGATCGGGTGTATGCGCGGTCGGTGCAGTT
GCATGACGAGATCACACCGCGCATGGCTGAGGAAGGGATGCGGGTGTTTGATGCGTATTTGGGGTTGTATTTGCCGGTGT
TTTTGGTGAAGAGAAAAATATCACCACTGCAGTGA

Upstream 100 bases:

>100_bases
CACGATAAACAGTTAGATTTGTGTATACCGACGAGCGCGGGGCGTGGGAGCGATAATCGTTTGGCGACGGCAGCGATTCA
TCCCGTCAGAATCCCTTACA

Downstream 100 bases:

>100_bases
CCGTTTGTAGAGACTGAGTTCAATACTGTTATTAACGCTGTTTACGTATAGCCTTACGGTGTTTTCTAGACATACCAGCC
GCATATATTTTAAAAGTATT

Product: regulatory protein, TetR

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator AguR; Regulatory Protein TetR; TetR Family Regulatory Protein

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MPAAQPRATPMTRAATPRKPQARSQARIDSILDAARTLLAEQGVASLSIYSVAERAGIPPSSVYHFFASVPALLEALTAD
IHAAFRASLQAPIDHDQLTTWRDLSRIVELRMLAIYNADAAARQLILAQHGLTEINQADRQHDIELGHLMLEVFDRHFQL
PALPDDVDVFALAMELGDRVYARSVQLHDEITPRMAEEGMRVFDAYLGLYLPVFLVKRKISPLQ

Sequences:

>Translated_224_residues
MPAAQPRATPMTRAATPRKPQARSQARIDSILDAARTLLAEQGVASLSIYSVAERAGIPPSSVYHFFASVPALLEALTAD
IHAAFRASLQAPIDHDQLTTWRDLSRIVELRMLAIYNADAAARQLILAQHGLTEINQADRQHDIELGHLMLEVFDRHFQL
PALPDDVDVFALAMELGDRVYARSVQLHDEITPRMAEEGMRVFDAYLGLYLPVFLVKRKISPLQ
>Mature_223_residues
PAAQPRATPMTRAATPRKPQARSQARIDSILDAARTLLAEQGVASLSIYSVAERAGIPPSSVYHFFASVPALLEALTADI
HAAFRASLQAPIDHDQLTTWRDLSRIVELRMLAIYNADAAARQLILAQHGLTEINQADRQHDIELGHLMLEVFDRHFQLP
ALPDDVDVFALAMELGDRVYARSVQLHDEITPRMAEEGMRVFDAYLGLYLPVFLVKRKISPLQ

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24943; Mature: 24812

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAAQPRATPMTRAATPRKPQARSQARIDSILDAARTLLAEQGVASLSIYSVAERAGIPP
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCH
SSVYHFFASVPALLEALTADIHAAFRASLQAPIDHDQLTTWRDLSRIVELRMLAIYNADA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCH
AARQLILAQHGLTEINQADRQHDIELGHLMLEVFDRHFQLPALPDDVDVFALAMELGDRV
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
YARSVQLHDEITPRMAEEGMRVFDAYLGLYLPVFLVKRKISPLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PAAQPRATPMTRAATPRKPQARSQARIDSILDAARTLLAEQGVASLSIYSVAERAGIPP
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCH
SSVYHFFASVPALLEALTADIHAAFRASLQAPIDHDQLTTWRDLSRIVELRMLAIYNADA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCH
AARQLILAQHGLTEINQADRQHDIELGHLMLEVFDRHFQLPALPDDVDVFALAMELGDRV
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
YARSVQLHDEITPRMAEEGMRVFDAYLGLYLPVFLVKRKISPLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA