Click here to switch to the map view.

The map label for this gene is 66048103

Identifier: 66048103

GI number: 66048103

Start: 5791409

End: 5791852

Strand: Direct

Name: 66048103

Synonym: Psyr_4879

Alternate gene names: NA

Gene position: 5791409-5791852 (Clockwise)

Preceding gene: 66048093

Following gene: 66048105

Centisome position: 95.04

GC content: 48.65

Gene sequence:

>444_bases
GTGACAGTTGTCATCACTTTGACGGCGCACCGTGTTCAAGCACAAAAAATTTTTTTCACTTTGCTTTTTTGGGCCATTTT
CAAGCATTTTTCGGCCTTCAGAGCCGTCCCTCACTGTAGTCCATGTGAACAAAAAGGCAATTCTGGTGTCGGGCGCCATG
GCAGCCAGCCGATTGGCCAATGCGCAAACGGCTCATTTGTGCACGTGAGGGGCGAAGATCCATCATCGAGTTCGGATGGA
CGAGTGCATCAGTATGGGTTTCTGCACGCTAGTGGTGCGCAAATTGAGTGCGCTTCTGGAAAACCGGAAGGCTGGAACGT
GTACTGCGTTATCAAGGAGGAACGACGCGGCACTACGACTCCGCTCTATAGCCAAATCACTTCCGGCACACGAGCAACAT
GTATAAATATTTATAATTCAAAGAGTTATGTGTTGCAGGAATAA

Upstream 100 bases:

>100_bases
AATCCACCTTCACCGGCCTCGATCCCCGCCAGCAGAGTGCTGATGCAAAACTGGCGAAAGCCTTGTATTACGGGAACTTC
GGGGAGATTAGTCAGTTAAT

Downstream 100 bases:

>100_bases
AGCATGGCCTTACGCAGGGAGGATCCGCTTCTCACGCGAACACGTTTTTTCTGAAACGATTTGAAAACTGGCACGCCCCC
TGCAATAGGTATTACATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MTVVITLTAHRVQAQKIFFTLLFWAIFKHFSAFRAVPHCSPCEQKGNSGVGRHGSQPIGQCANGSFVHVRGEDPSSSSDG
RVHQYGFLHASGAQIECASGKPEGWNVYCVIKEERRGTTTPLYSQITSGTRATCINIYNSKSYVLQE

Sequences:

>Translated_147_residues
MTVVITLTAHRVQAQKIFFTLLFWAIFKHFSAFRAVPHCSPCEQKGNSGVGRHGSQPIGQCANGSFVHVRGEDPSSSSDG
RVHQYGFLHASGAQIECASGKPEGWNVYCVIKEERRGTTTPLYSQITSGTRATCINIYNSKSYVLQE
>Mature_146_residues
TVVITLTAHRVQAQKIFFTLLFWAIFKHFSAFRAVPHCSPCEQKGNSGVGRHGSQPIGQCANGSFVHVRGEDPSSSSDGR
VHQYGFLHASGAQIECASGKPEGWNVYCVIKEERRGTTTPLYSQITSGTRATCINIYNSKSYVLQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16167; Mature: 16036

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVVITLTAHRVQAQKIFFTLLFWAIFKHFSAFRAVPHCSPCEQKGNSGVGRHGSQPIGQ
CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCC
CANGSFVHVRGEDPSSSSDGRVHQYGFLHASGAQIECASGKPEGWNVYCVIKEERRGTTT
CCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCCEEEEEEEEECCCCCCC
PLYSQITSGTRATCINIYNSKSYVLQE
HHHHHHCCCCCEEEEEEECCCEEEECC
>Mature Secondary Structure 
TVVITLTAHRVQAQKIFFTLLFWAIFKHFSAFRAVPHCSPCEQKGNSGVGRHGSQPIGQ
EEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCC
CANGSFVHVRGEDPSSSSDGRVHQYGFLHASGAQIECASGKPEGWNVYCVIKEERRGTTT
CCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCCEEEEEEEEECCCCCCC
PLYSQITSGTRATCINIYNSKSYVLQE
HHHHHHCCCCCEEEEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA