| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is aes [H]
Identifier: 66047557
GI number: 66047557
Start: 5181945
End: 5182838
Strand: Reverse
Name: aes [H]
Synonym: Psyr_4330
Alternate gene names: 66047557
Gene position: 5182838-5181945 (Counterclockwise)
Preceding gene: 66047558
Following gene: 66047554
Centisome position: 85.05
GC content: 61.63
Gene sequence:
>894_bases ATGCCGCGTTTCCAGATTCGCAATCGCGTCACGCCCCGGCTGATTCAGGCGCTGTTACGTGCAGCTCAGATCGGCAGCGC CCTGAAACCGGGAGGGCATGACCTGCGCATTGAGAAAAGAACGGTCAGCTCGGATAACGTACCGGTGCCCTTGCGCATCA TCCGCCCCAAAGGCAAACCCCGGGGCGTGGTGTTCGACATCCACGGCGGCGGATGGGTGATCGGCAATGCGCAGATGAAC GATGATCTCAACGTCGCCATGGTCAATGCCTGCGACGTGGCCATTGTTTCGGTTGATTATCGACTCGCTGTGACAACCCC CATTGAGGGCCTGATGGAGGACTGTTTTTCTGCCGCCTGCTGGCTGTTGGGCAAAGACTGCGAAGAGTTTGCCGGCCTGC CGGTTATCGTGGTCGGCGAATCCGCTGGCGGGCATCTTGCCGCAGCCACCCTCCTGAAATTGAAAAACCGACCTGATCTG CTCGAGCGGATAGTGGGTACGGTCCTGTATTACGGCGTCTACGACCTGACGGGCACCATGAGCGTGCGTACCGCAGGGCC CGAGACGCTGGTGCTGGACGGTCCGGGCATGGTCGGCGCCATGCGCGCGCTCACCCCTGATCGAAGCGACGATAAACGCC GTGAACCGCCATTGTCACCACTGTATGGCGATTTGACCGGCCTTCCGCCCGCACTGATGTTCGTCGGAGAGATCGACCCG CTGCTGGATGACACACTGCAAATGGCCGAGCGCTGGGCCAACTCGGCAGAGGTCGAAATGCACCTCATGCCCGAGTCGCC GCACGGCTTCATCCACTTCCCGACCACGTTGGCGCGCAAGGCGCTGGCGCGCAGCCGCGAGTGGATCAATGAGCGGATCG ATGCGCTGGGTTGA
Upstream 100 bases:
>100_bases CAGCCTGACAAGAGAGCAGAAATTGGACACAAAACAGCTTTGGCCTTGCAGTGAACAGGAGTTGGTAGAAGTACGACGGT TCAATAAAACCCTCTCGCGG
Downstream 100 bases:
>100_bases GCCCGCCCCTCAACCTATCTCCGCGACCCACTTCGATACCGGGTCGCCACTGCTCAAGCCCGGCTGCACAAGACCGTCGA TCATGAAGGTCGGCGAGACG
Product: hypothetical protein
Products: alcohol; a carboxylate [C]
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MPRFQIRNRVTPRLIQALLRAAQIGSALKPGGHDLRIEKRTVSSDNVPVPLRIIRPKGKPRGVVFDIHGGGWVIGNAQMN DDLNVAMVNACDVAIVSVDYRLAVTTPIEGLMEDCFSAACWLLGKDCEEFAGLPVIVVGESAGGHLAAATLLKLKNRPDL LERIVGTVLYYGVYDLTGTMSVRTAGPETLVLDGPGMVGAMRALTPDRSDDKRREPPLSPLYGDLTGLPPALMFVGEIDP LLDDTLQMAERWANSAEVEMHLMPESPHGFIHFPTTLARKALARSREWINERIDALG
Sequences:
>Translated_297_residues MPRFQIRNRVTPRLIQALLRAAQIGSALKPGGHDLRIEKRTVSSDNVPVPLRIIRPKGKPRGVVFDIHGGGWVIGNAQMN DDLNVAMVNACDVAIVSVDYRLAVTTPIEGLMEDCFSAACWLLGKDCEEFAGLPVIVVGESAGGHLAAATLLKLKNRPDL LERIVGTVLYYGVYDLTGTMSVRTAGPETLVLDGPGMVGAMRALTPDRSDDKRREPPLSPLYGDLTGLPPALMFVGEIDP LLDDTLQMAERWANSAEVEMHLMPESPHGFIHFPTTLARKALARSREWINERIDALG >Mature_296_residues PRFQIRNRVTPRLIQALLRAAQIGSALKPGGHDLRIEKRTVSSDNVPVPLRIIRPKGKPRGVVFDIHGGGWVIGNAQMND DLNVAMVNACDVAIVSVDYRLAVTTPIEGLMEDCFSAACWLLGKDCEEFAGLPVIVVGESAGGHLAAATLLKLKNRPDLL ERIVGTVLYYGVYDLTGTMSVRTAGPETLVLDGPGMVGAMRALTPDRSDDKRREPPLSPLYGDLTGLPPALMFVGEIDPL LDDTLQMAERWANSAEVEMHLMPESPHGFIHFPTTLARKALARSREWINERIDALG
Specific function: Displays esterase activity towards short chain fatty esters (acyl chain length of up to 8 carbons). Able to hydrolyze triacetylglycerol (triacetin) and tributyrylglycerol (tributyrin), but not trioleylglycerol (triolein) or cholesterol oleate. Negatively
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1786682, Length=247, Percent_Identity=26.3157894736842, Blast_Score=92, Evalue=5e-20, Organism=Caenorhabditis elegans, GI72001146, Length=90, Percent_Identity=42.2222222222222, Blast_Score=67, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: 3.1.1.- [C]
Molecular weight: Translated: 32377; Mature: 32246
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRFQIRNRVTPRLIQALLRAAQIGSALKPGGHDLRIEKRTVSSDNVPVPLRIIRPKGKP CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCC RGVVFDIHGGGWVIGNAQMNDDLNVAMVNACDVAIVSVDYRLAVTTPIEGLMEDCFSAAC CEEEEEECCCCEEEECCEECCCCCEEEEEECEEEEEEEEEEEEEECCHHHHHHHHHHHHH WLLGKDCEEFAGLPVIVVGESAGGHLAAATLLKLKNRPDLLERIVGTVLYYGVYDLTGTM HHHCCCHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCE SVRTAGPETLVLDGPGMVGAMRALTPDRSDDKRREPPLSPLYGDLTGLPPALMFVGEIDP EEEECCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCH LLDDTLQMAERWANSAEVEMHLMPESPHGFIHFPTTLARKALARSREWINERIDALG HHHHHHHHHHHCCCCCEEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PRFQIRNRVTPRLIQALLRAAQIGSALKPGGHDLRIEKRTVSSDNVPVPLRIIRPKGKP CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCC RGVVFDIHGGGWVIGNAQMNDDLNVAMVNACDVAIVSVDYRLAVTTPIEGLMEDCFSAAC CEEEEEECCCCEEEECCEECCCCCEEEEEECEEEEEEEEEEEEEECCHHHHHHHHHHHHH WLLGKDCEEFAGLPVIVVGESAGGHLAAATLLKLKNRPDLLERIVGTVLYYGVYDLTGTM HHHCCCHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCE SVRTAGPETLVLDGPGMVGAMRALTPDRSDDKRREPPLSPLYGDLTGLPPALMFVGEIDP EEEECCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCH LLDDTLQMAERWANSAEVEMHLMPESPHGFIHFPTTLARKALARSREWINERIDALG HHHHHHHHHHHCCCCCEEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Carboxylic ester; H2O [C]
Specific reaction: Carboxylic ester + H2O = an alcohol + carboxylate [C]
General reaction: Hydrolase; Acting on ester bonds; Carboxylic ester hydrolases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA