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The map label for this gene is yagS [H]

Identifier: 66047511

GI number: 66047511

Start: 5109718

End: 5110707

Strand: Reverse

Name: yagS [H]

Synonym: Psyr_4284

Alternate gene names: 66047511

Gene position: 5110707-5109718 (Counterclockwise)

Preceding gene: 66047512

Following gene: 66047510

Centisome position: 83.87

GC content: 61.82

Gene sequence:

>990_bases
ATGAATCCGTTTACCTACAGCAAGCCGACCGACATCACTGCTGCGGTCAACCTGAGCGGACCGGCCACGCGTTTCATTGC
AGGCGGCACCAATCTGCTTGACCTGATGAAAGAAAACGTCGCCACGCCCGAGCACCTGATCGACATCACCGGCCTGCCTT
TGAGGGATGTCAGTGAAACCGCTTCGGGCGGTTTGATGATCGGTGCGTTGGTCAGCAACGCCGACCTGGCCTACCACCCG
CTGATCGAAGCGCGTTACCCGCTGCTGAGCAAAGCCGTGCTGGCCGGTGCTTCGCCGCAGTTGCGCAACATGGCCAGCAC
CGGCGGCAACCTGCTGCAACGCACCCGCTGCTATTACTTCTATGACACCGGCGTGCCGTGCAACAAGCGTGAGCCAGGCA
GTGGCTGCCCGGCGCGTACGGGCCTGAATCGCATTCACGCGATCCTGGGTGCCAGCGAAGACTGCGTCGCGACTCACCCG
TCCGACATGTGCGTGGCACTCGCTGCGCTGGAAGCCGTGGTGCATGTTCAAGGACGTGCCGGCCGCCGCACTATCGAGTT
TGCTGATTTCCATCGCCTGCCGGGTGATGCTCCGCAACGGGACAATCAACTGGCCGACGATGAGTTGATCGTCGCCGTCG
AACTGCCTGCAAACGGCTTTGTCAGCCACAACGCTTATCTGAAGATCCGCGACCGTGCGTCCTATGCGTTTGCCCTGATA
TCGGTGGCTGCCGCCATCGATATGGACGGCGATGTGATTCGCGACGTGCGTCTGGCATTGGGCGGTGTCGCGCACAAGCC
ATGGCGCGACAAGGCGGTCGAAGCGCTGTTGGTCGGCAAGCCGGTCACTCGCGAGAACTTCGCCGCTGCTGCAGACGCCA
TGCTTGAAGATGCGCAGCCTCTGGAGCACAACGGTTTCAAAGTCAGACTGGCCCGCCGGGCGATCATTCGTGCCTTGAGC
GATGCCGCAACAGGAGGGAGCGCCCAATGA

Upstream 100 bases:

>100_bases
GTAACCTGTGCCGTTGCGGTGCCTACAGCAATATTCTCGCTGCCGTCGAAGAGGCGCTGCCGCAGTTCCACAACGCAGCA
CCAAAGCCGGAGGTGAACGC

Downstream 100 bases:

>100_bases
ACCAGCCATTTTCGCCAATGGGCAAGCCTGTGGACCGCGTCGACGGCCGCCTGAAAGTGACCGGGGGCGCACGTTACGCC
GGTGAATACCCTGAAGAAGG

Product: molybdopterin dehydrogenase, FAD-binding:CO dehydrogenase flavoprotein, C-terminal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MNPFTYSKPTDITAAVNLSGPATRFIAGGTNLLDLMKENVATPEHLIDITGLPLRDVSETASGGLMIGALVSNADLAYHP
LIEARYPLLSKAVLAGASPQLRNMASTGGNLLQRTRCYYFYDTGVPCNKREPGSGCPARTGLNRIHAILGASEDCVATHP
SDMCVALAALEAVVHVQGRAGRRTIEFADFHRLPGDAPQRDNQLADDELIVAVELPANGFVSHNAYLKIRDRASYAFALI
SVAAAIDMDGDVIRDVRLALGGVAHKPWRDKAVEALLVGKPVTRENFAAAADAMLEDAQPLEHNGFKVRLARRAIIRALS
DAATGGSAQ

Sequences:

>Translated_329_residues
MNPFTYSKPTDITAAVNLSGPATRFIAGGTNLLDLMKENVATPEHLIDITGLPLRDVSETASGGLMIGALVSNADLAYHP
LIEARYPLLSKAVLAGASPQLRNMASTGGNLLQRTRCYYFYDTGVPCNKREPGSGCPARTGLNRIHAILGASEDCVATHP
SDMCVALAALEAVVHVQGRAGRRTIEFADFHRLPGDAPQRDNQLADDELIVAVELPANGFVSHNAYLKIRDRASYAFALI
SVAAAIDMDGDVIRDVRLALGGVAHKPWRDKAVEALLVGKPVTRENFAAAADAMLEDAQPLEHNGFKVRLARRAIIRALS
DAATGGSAQ
>Mature_329_residues
MNPFTYSKPTDITAAVNLSGPATRFIAGGTNLLDLMKENVATPEHLIDITGLPLRDVSETASGGLMIGALVSNADLAYHP
LIEARYPLLSKAVLAGASPQLRNMASTGGNLLQRTRCYYFYDTGVPCNKREPGSGCPARTGLNRIHAILGASEDCVATHP
SDMCVALAALEAVVHVQGRAGRRTIEFADFHRLPGDAPQRDNQLADDELIVAVELPANGFVSHNAYLKIRDRASYAFALI
SVAAAIDMDGDVIRDVRLALGGVAHKPWRDKAVEALLVGKPVTRENFAAAADAMLEDAQPLEHNGFKVRLARRAIIRALS
DAATGGSAQ

Specific function: Unknown

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786479, Length=326, Percent_Identity=52.1472392638037, Blast_Score=298, Evalue=3e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005107
- InterPro:   IPR016169
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR002346 [H]

Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 35058; Mature: 35058

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPFTYSKPTDITAAVNLSGPATRFIAGGTNLLDLMKENVATPEHLIDITGLPLRDVSET
CCCCCCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHCCCHHHEEEECCCCCHHHHHH
ASGGLMIGALVSNADLAYHPLIEARYPLLSKAVLAGASPQLRNMASTGGNLLQRTRCYYF
CCCCEEEEEECCCCCCEECCHHHHCCHHHHHHHHCCCCHHHHHHHHCCHHHHHHCEEEEE
YDTGVPCNKREPGSGCPARTGLNRIHAILGASEDCVATHPSDMCVALAALEAVVHVQGRA
EECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHCCCC
GRRTIEFADFHRLPGDAPQRDNQLADDELIVAVELPANGFVSHNAYLKIRDRASYAFALI
CCEEEEHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCEECCCEEEEEECCCHHHHHHH
SVAAAIDMDGDVIRDVRLALGGVAHKPWRDKAVEALLVGKPVTRENFAAAADAMLEDAQP
HHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
LEHNGFKVRLARRAIIRALSDAATGGSAQ
CCCCCEEEEHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNPFTYSKPTDITAAVNLSGPATRFIAGGTNLLDLMKENVATPEHLIDITGLPLRDVSET
CCCCCCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHCCCHHHEEEECCCCCHHHHHH
ASGGLMIGALVSNADLAYHPLIEARYPLLSKAVLAGASPQLRNMASTGGNLLQRTRCYYF
CCCCEEEEEECCCCCCEECCHHHHCCHHHHHHHHCCCCHHHHHHHHCCHHHHHHCEEEEE
YDTGVPCNKREPGSGCPARTGLNRIHAILGASEDCVATHPSDMCVALAALEAVVHVQGRA
EECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHCCCC
GRRTIEFADFHRLPGDAPQRDNQLADDELIVAVELPANGFVSHNAYLKIRDRASYAFALI
CCEEEEHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCEECCCEEEEEECCCHHHHHHH
SVAAAIDMDGDVIRDVRLALGGVAHKPWRDKAVEALLVGKPVTRENFAAAADAMLEDAQP
HHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
LEHNGFKVRLARRAIIRALSDAATGGSAQ
CCCCCEEEEHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]