| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is laaA [H]
Identifier: 66047444
GI number: 66047444
Start: 5022527
End: 5023450
Strand: Direct
Name: laaA [H]
Synonym: Psyr_4217
Alternate gene names: 66047444
Gene position: 5022527-5023450 (Clockwise)
Preceding gene: 66047443
Following gene: 66047445
Centisome position: 82.42
GC content: 56.82
Gene sequence:
>924_bases ATGGCAGATATGACGATCAAGGAAGGTTTTGCGCCCTTTGGCGACTATCAGACGTGGTATCGCATCACAGGCGACCTGCA CGGTCCCGGCACACCACTGGTCATTCTGCACGGCGGCCCCGGTTGTACGCACGATTACGTCGATGCGTTCAAGGACATCG CCAGCACTGGCCGGGCCGTTATCCATTACGACCAGTTGGGTAACGGAAAGTCGACTCGACTGCCCCATAAGGGTCGCGAT TTCTGGACGGTCGATCTGTTCCTGAGCGAACTCGACAATCTGCTTGCGCACCTGAGTATCAAAAACAACTACGCATTGCT GGGCCAGTCGTGGGGCGGGATGCTGGCGGCAGAGCATGCCGTGCGCCAGCCTGCAGGGCTGAAGGCGCTGATCATCGCCA ACTCCCCCGCAGACATGCTCACTTGGGTAAACGAGGCCAACCGGCTGCGCGAGGATCTGCCAGCCGACGTGCAGGCTGCG TTGCTCAAGCACGAAGAGGCGGGAACATTGAAAGACCCGGAATACCTGAAAGCCTCGCGAGCATTCTATGACCGTCATGT CTGCCGCATCACACCGTGGCCGGAGGAGGTAAAACGTACCTTCGACGCGATTGACGCCGATCCGACCGTGTACCACGCCA TGAATGGCCCTACCGAGTTTCACGTCATCGGTACGATGAAGAACTGGACCATCGTTGATCGCTTGAAGCTCATCAATGTT CCTGCCTTACTGATTTCCGGGAAGTATGACGAAGCCACACCGCTGGTCGTGAAGCCCTATGTGGATAACGTCCCCGACAT CAGTTGGTCTGTCTTCGAAGAGTCCAGTCATATGCCCCATGTAGAGGAGCGAATGGCCTGTATGGGATGCATCGCAGGTT TTCTGGACAAGCTGGTCGTTACGGGTAACGAGTTTGCGGCTTAA
Upstream 100 bases:
>100_bases ACTGACCGGATTATCGGCCAAAACCTATCATTTTCTATAGTTATGAGGCGCAAGACGCCGCGCTATGGTGCCCCCAAACT ATCCAGCAGGGACCGGCGAC
Downstream 100 bases:
>100_bases CCATAAGCCCTCATTTGATCCGCCCCGGGAAGCCACGTCATTAGAGTTAATACTTCAGTAACGCTAATAGCGAAAGTTAA CTTTATTGGTCGTACGACTG
Product: peptidase S33, tricorn interacting factor 1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MADMTIKEGFAPFGDYQTWYRITGDLHGPGTPLVILHGGPGCTHDYVDAFKDIASTGRAVIHYDQLGNGKSTRLPHKGRD FWTVDLFLSELDNLLAHLSIKNNYALLGQSWGGMLAAEHAVRQPAGLKALIIANSPADMLTWVNEANRLREDLPADVQAA LLKHEEAGTLKDPEYLKASRAFYDRHVCRITPWPEEVKRTFDAIDADPTVYHAMNGPTEFHVIGTMKNWTIVDRLKLINV PALLISGKYDEATPLVVKPYVDNVPDISWSVFEESSHMPHVEERMACMGCIAGFLDKLVVTGNEFAA
Sequences:
>Translated_307_residues MADMTIKEGFAPFGDYQTWYRITGDLHGPGTPLVILHGGPGCTHDYVDAFKDIASTGRAVIHYDQLGNGKSTRLPHKGRD FWTVDLFLSELDNLLAHLSIKNNYALLGQSWGGMLAAEHAVRQPAGLKALIIANSPADMLTWVNEANRLREDLPADVQAA LLKHEEAGTLKDPEYLKASRAFYDRHVCRITPWPEEVKRTFDAIDADPTVYHAMNGPTEFHVIGTMKNWTIVDRLKLINV PALLISGKYDEATPLVVKPYVDNVPDISWSVFEESSHMPHVEERMACMGCIAGFLDKLVVTGNEFAA >Mature_306_residues ADMTIKEGFAPFGDYQTWYRITGDLHGPGTPLVILHGGPGCTHDYVDAFKDIASTGRAVIHYDQLGNGKSTRLPHKGRDF WTVDLFLSELDNLLAHLSIKNNYALLGQSWGGMLAAEHAVRQPAGLKALIIANSPADMLTWVNEANRLREDLPADVQAAL LKHEEAGTLKDPEYLKASRAFYDRHVCRITPWPEEVKRTFDAIDADPTVYHAMNGPTEFHVIGTMKNWTIVDRLKLINVP ALLISGKYDEATPLVVKPYVDNVPDISWSVFEESSHMPHVEERMACMGCIAGFLDKLVVTGNEFAA
Specific function: Hydrolyzes L-prolinamide, L-proline-p-nitroanilide, L- alaninamide, L-methioninamide, piperidine-2-carboxamide and piperazine-2-carboxamide. Has a much lower activity towards piperazine-2-tert-butylcarboxamide. Does not hydrolyze dipeptides and D-prolinam
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR005945 - InterPro: IPR002410 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.5.1.101 [H]
Molecular weight: Translated: 34098; Mature: 33967
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADMTIKEGFAPFGDYQTWYRITGDLHGPGTPLVILHGGPGCTHDYVDAFKDIASTGRAV CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEE IHYDQLGNGKSTRLPHKGRDFWTVDLFLSELDNLLAHLSIKNNYALLGQSWGGMLAAEHA EEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHEEEECCCEEEEECCCCCHHHHHHH VRQPAGLKALIIANSPADMLTWVNEANRLREDLPADVQAALLKHEEAGTLKDPEYLKASR HCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHH AFYDRHVCRITPWPEEVKRTFDAIDADPTVYHAMNGPTEFHVIGTMKNWTIVDRLKLINV HHHHCCEEEECCCHHHHHHHHHHCCCCCCEEEECCCCCEEEEEECCCCCCHHHHHHHHCC PALLISGKYDEATPLVVKPYVDNVPDISWSVFEESSHMPHVEERMACMGCIAGFLDKLVV CEEEEECCCCCCCCEEEECCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHEE TGNEFAA CCCCCCC >Mature Secondary Structure ADMTIKEGFAPFGDYQTWYRITGDLHGPGTPLVILHGGPGCTHDYVDAFKDIASTGRAV CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEE IHYDQLGNGKSTRLPHKGRDFWTVDLFLSELDNLLAHLSIKNNYALLGQSWGGMLAAEHA EEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHEEEECCCEEEEECCCCCHHHHHHH VRQPAGLKALIIANSPADMLTWVNEANRLREDLPADVQAALLKHEEAGTLKDPEYLKASR HCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHH AFYDRHVCRITPWPEEVKRTFDAIDADPTVYHAMNGPTEFHVIGTMKNWTIVDRLKLINV HHHHCCEEEECCCHHHHHHHHHHCCCCCCEEEECCCCCEEEEEECCCCCCHHHHHHHHCC PALLISGKYDEATPLVVKPYVDNVPDISWSVFEESSHMPHVEERMACMGCIAGFLDKLVV CEEEEECCCCCCCCEEEECCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHEE TGNEFAA CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA