| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is maf [C]
Identifier: 66047387
GI number: 66047387
Start: 4950137
End: 4950739
Strand: Reverse
Name: maf [C]
Synonym: Psyr_4160
Alternate gene names: 66047387
Gene position: 4950739-4950137 (Counterclockwise)
Preceding gene: 66047388
Following gene: 66047386
Centisome position: 81.24
GC content: 61.69
Gene sequence:
>603_bases ATGCCCTCGCTTTATCTGGCTTCTGGCTCGCCGCGCCGCCGCGAACTTCTGACTCAGATCGGTGTGCCCTTTACCGTACT GAGCGCTCAGATCGACGAAACCCCCTTCGACCATGAAACCCCGGCTGCCTATGTCGAGCGTCTTGCGCTGGGCAAGGCTC AGGCCGGGCTGTCCGTGTTGCCAGCCGAACAACAGGCCTGCGTGATGGGCGCTGACACGGCGGTGGTGCTCGATGGACGC ATTCTCGGCAAGCCGGTCGATGAAGCGGATGCTCTTGCCATGCTGATGGCCCTGTCCGGGCGCGAGCATCAAGTGCTGAC GGCTGTCGCGCTCTGTGATCGGCAACGCAGCGACACCCGTATTGTTACCAGTCGTGTGCGCTTTCGCCCGATTCAAATCC ATGAAGCTCAGGCCTACTGGACCAGTGGCGAGCCCGCCGACAAGGCTGGCGGCTATGCCATCCAGGGGTTGGCAGCGATT TTCGTCGAGGGCCTGCAAGGCAGCTATTCTGGGGTGGTGGGTCTGCCCCTGTGCGAAACCGCAGAACTGCTTGGCCATTT CGGCATACCCTGCTGGCAATGCCTGGAAGGTGACAAGTCATGA
Upstream 100 bases:
>100_bases CGTGGATTGCGCAAACGTTTGAAAATCAATTAAGCGCAAGGTGAGCGCGACGCCCCGCTGCGTTGTTCGCGCTCACCCGC ACAGACACGGAGATGTCCTT
Downstream 100 bases:
>100_bases GTGAAGAGATTCTGATCAACATCACGCCGATGGAATCGCGCGTGGCCGTGGTGGAAAACGGGGTTCTGCAAGAAGTGCAT GTCGAGCGTACCCAGCGTCG
Product: Maf-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MPSLYLASGSPRRRELLTQIGVPFTVLSAQIDETPFDHETPAAYVERLALGKAQAGLSVLPAEQQACVMGADTAVVLDGR ILGKPVDEADALAMLMALSGREHQVLTAVALCDRQRSDTRIVTSRVRFRPIQIHEAQAYWTSGEPADKAGGYAIQGLAAI FVEGLQGSYSGVVGLPLCETAELLGHFGIPCWQCLEGDKS
Sequences:
>Translated_200_residues MPSLYLASGSPRRRELLTQIGVPFTVLSAQIDETPFDHETPAAYVERLALGKAQAGLSVLPAEQQACVMGADTAVVLDGR ILGKPVDEADALAMLMALSGREHQVLTAVALCDRQRSDTRIVTSRVRFRPIQIHEAQAYWTSGEPADKAGGYAIQGLAAI FVEGLQGSYSGVVGLPLCETAELLGHFGIPCWQCLEGDKS >Mature_199_residues PSLYLASGSPRRRELLTQIGVPFTVLSAQIDETPFDHETPAAYVERLALGKAQAGLSVLPAEQQACVMGADTAVVLDGRI LGKPVDEADALAMLMALSGREHQVLTAVALCDRQRSDTRIVTSRVRFRPIQIHEAQAYWTSGEPADKAGGYAIQGLAAIF VEGLQGSYSGVVGLPLCETAELLGHFGIPCWQCLEGDKS
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family
Homologues:
Organism=Homo sapiens, GI117553627, Length=187, Percent_Identity=39.572192513369, Blast_Score=112, Evalue=3e-25, Organism=Homo sapiens, GI291045183, Length=182, Percent_Identity=36.8131868131868, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI291045181, Length=118, Percent_Identity=44.9152542372881, Blast_Score=95, Evalue=4e-20, Organism=Homo sapiens, GI310133124, Length=118, Percent_Identity=44.9152542372881, Blast_Score=95, Evalue=5e-20, Organism=Escherichia coli, GI1789646, Length=188, Percent_Identity=50, Blast_Score=162, Evalue=1e-41, Organism=Escherichia coli, GI87081830, Length=191, Percent_Identity=34.5549738219895, Blast_Score=92, Evalue=3e-20, Organism=Caenorhabditis elegans, GI193202443, Length=183, Percent_Identity=32.2404371584699, Blast_Score=90, Evalue=7e-19, Organism=Drosophila melanogaster, GI78706856, Length=190, Percent_Identity=36.8421052631579, Blast_Score=105, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y4160_PSEU2 (Q4ZNT2)
Other databases:
- EMBL: CP000075 - RefSeq: YP_237228.1 - HSSP: Q02169 - ProteinModelPortal: Q4ZNT2 - SMR: Q4ZNT2 - STRING: Q4ZNT2 - GeneID: 3369697 - GenomeReviews: CP000075_GR - KEGG: psb:Psyr_4160 - NMPDR: fig|205918.4.peg.4595 - eggNOG: COG0424 - HOGENOM: HBG414045 - OMA: VVGLPLC - ProtClustDB: PRK00032 - BioCyc: PSYR205918:PSYR_4160-MONOMER - GO: GO:0005737 - HAMAP: MF_00528 - InterPro: IPR003697 - PIRSF: PIRSF006305 - TIGRFAMs: TIGR00172
Pfam domain/function: PF02545 Maf
EC number: NA
Molecular weight: Translated: 21379; Mature: 21247
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: ACT_SITE 33-33
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSLYLASGSPRRRELLTQIGVPFTVLSAQIDETPFDHETPAAYVERLALGKAQAGLSVL CCCEEECCCCCHHHHHHHHHCCCCEEEEHHCCCCCCCCCCHHHHHHHHHHCHHHCCCEEC PAEQQACVMGADTAVVLDGRILGKPVDEADALAMLMALSGREHQVLTAVALCDRQRSDTR CCCCCEEEECCCEEEEECCEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC IVTSRVRFRPIQIHEAQAYWTSGEPADKAGGYAIQGLAAIFVEGLQGSYSGVVGLPLCET EEHHHHEEEEEEEEECEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCHHHH AELLGHFGIPCWQCLEGDKS HHHHHHCCCHHHHHHCCCCC >Mature Secondary Structure PSLYLASGSPRRRELLTQIGVPFTVLSAQIDETPFDHETPAAYVERLALGKAQAGLSVL CCEEECCCCCHHHHHHHHHCCCCEEEEHHCCCCCCCCCCHHHHHHHHHHCHHHCCCEEC PAEQQACVMGADTAVVLDGRILGKPVDEADALAMLMALSGREHQVLTAVALCDRQRSDTR CCCCCEEEECCCEEEEECCEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC IVTSRVRFRPIQIHEAQAYWTSGEPADKAGGYAIQGLAAIFVEGLQGSYSGVVGLPLCET EEHHHHEEEEEEEEECEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCHHHH AELLGHFGIPCWQCLEGDKS HHHHHHCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA