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The map label for this gene is rng [H]

Identifier: 66047386

GI number: 66047386

Start: 4948683

End: 4950140

Strand: Reverse

Name: rng [H]

Synonym: Psyr_4159

Alternate gene names: 66047386

Gene position: 4950140-4948683 (Counterclockwise)

Preceding gene: 66047387

Following gene: 66047385

Centisome position: 81.23

GC content: 59.33

Gene sequence:

>1458_bases
ATGAGTGAAGAGATTCTGATCAACATCACGCCGATGGAATCGCGCGTGGCCGTGGTGGAAAACGGGGTTCTGCAAGAAGT
GCATGTCGAGCGTACCCAGCGTCGCGGCATCGTCGGCAATATCTACAAAGGCAAGGTTGTGCGGGTGCTTCCCGGCATGC
AGGCGGCGTTCATCGACATTGGTCTGGATCGCGCGGCGTTCATTCATGCGTCGGAAATATCCATGCGTGAAGGGCCGGCG
GTCGAGAGCATTGCGTCGCTGGTACATGATGGCCAGAGCCTTGTCGTGCAAGTCACCAAAGACCCGATCGGCAGCAAGGG
CGCACGGCTGACCACGCAACTCTCCATTCCGTCGCGTTATCTGGTGTACATGCCGCGCACGGCGCATGTGGGCATCTCGC
TGAAAATCGAGGACGAAGCCGAGCGCGAACGACTCAAGAAAGTGGTCAGTGATTGTGTTGCCCAGGAAGGTATCAAGGAA
GCCGGAGGTTTCATTCTGCGCACCGCTGCCGAAGGCGCCGGGGCTGATGAAATCCTCATGGACATCCGTTATCTGCGCAG
GCTCTGGGACCAGATCGGCGAGCAGATCAAGACGGTCAGCCCGCCCACGGTGATTTACGAAGACCTGGGCCTGGCGCTGC
GCACCTTGCGCGATCTGGTCAGCCCGCGCATCGAGAAGATCCGTATCGACTCGCGGGAAACTTTTCAGAAAACCACCCAG
TTCGTCGCCGAGCTGATGCCGGAAATAGCCGACAGGCTCGAGCACTATCCGGGCGAGCGGCCGATCTTCGACCTCTATGG
GGTCGAGGACGAAATCCAGAAGGCCCTCGAGCGCAAGGTGCCGCTCAAGTCGGGCGGCTATCTGGTAATCGATCCAGCCG
AAGCGATGAGCACCATCGACGTCAACACCGGCGCGTTCGTAGGGCATCGCAACCTCGAAGAAACCATCTTCAAGACCAAT
CTGGAAGCTGCCACGGCCATCGCCCGGCAGCTGCGCCTGCGCAATCTGGGCGGCATCATCATCATCGATTTCATCGACAT
GGAAGACGGTGAACACCAGCGTCAGGTGCTGCGCACGCTGGAGAAACAGCTGGAACGCGATCACGCCAAGACCAACATCA
TCGGCATCACCGAGCTGGGTCTGGTGCAGATGACCCGCAAGCGCACCCGCGAAAGTCTCGAACAGGTGCTGTGCGAACCG
TGTCATTGCTGCGCAGGGCGGGGCAAGCTGAAGACCCCCGAGACCATCTGCTACGAAATCTTCCGGGAAATCCTGCGCGA
GGCCAGGGCCTATCAGGCAGTGGGCTATCGCGTTCTGGCCAATCAGCGCGTGGTGGATCGCCTGCTCGACGAGGAGTCCG
GCAACGTGGCTGAACTGGAGAGCTTTATTGGCCGCACTATCCGTTTTCAGGTAGAAACCATGTACTCGCAGGAACAATAC
GACGTGGTGCTGCTCTGA

Upstream 100 bases:

>100_bases
GCAGCTATTCTGGGGTGGTGGGTCTGCCCCTGTGCGAAACCGCAGAACTGCTTGGCCATTTCGGCATACCCTGCTGGCAA
TGCCTGGAAGGTGACAAGTC

Downstream 100 bases:

>100_bases
GGGTGCTGATCGTTTGAAATCTATGACAAGTGCCCTACGGGTTTCTGGCAGGTATGCCGTTTTATCGAGAATGATGCGTG
GCGAATGAGCAAAACCTGTA

Product: ribonuclease E and G

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MSEEILINITPMESRVAVVENGVLQEVHVERTQRRGIVGNIYKGKVVRVLPGMQAAFIDIGLDRAAFIHASEISMREGPA
VESIASLVHDGQSLVVQVTKDPIGSKGARLTTQLSIPSRYLVYMPRTAHVGISLKIEDEAERERLKKVVSDCVAQEGIKE
AGGFILRTAAEGAGADEILMDIRYLRRLWDQIGEQIKTVSPPTVIYEDLGLALRTLRDLVSPRIEKIRIDSRETFQKTTQ
FVAELMPEIADRLEHYPGERPIFDLYGVEDEIQKALERKVPLKSGGYLVIDPAEAMSTIDVNTGAFVGHRNLEETIFKTN
LEAATAIARQLRLRNLGGIIIIDFIDMEDGEHQRQVLRTLEKQLERDHAKTNIIGITELGLVQMTRKRTRESLEQVLCEP
CHCCAGRGKLKTPETICYEIFREILREARAYQAVGYRVLANQRVVDRLLDEESGNVAELESFIGRTIRFQVETMYSQEQY
DVVLL

Sequences:

>Translated_485_residues
MSEEILINITPMESRVAVVENGVLQEVHVERTQRRGIVGNIYKGKVVRVLPGMQAAFIDIGLDRAAFIHASEISMREGPA
VESIASLVHDGQSLVVQVTKDPIGSKGARLTTQLSIPSRYLVYMPRTAHVGISLKIEDEAERERLKKVVSDCVAQEGIKE
AGGFILRTAAEGAGADEILMDIRYLRRLWDQIGEQIKTVSPPTVIYEDLGLALRTLRDLVSPRIEKIRIDSRETFQKTTQ
FVAELMPEIADRLEHYPGERPIFDLYGVEDEIQKALERKVPLKSGGYLVIDPAEAMSTIDVNTGAFVGHRNLEETIFKTN
LEAATAIARQLRLRNLGGIIIIDFIDMEDGEHQRQVLRTLEKQLERDHAKTNIIGITELGLVQMTRKRTRESLEQVLCEP
CHCCAGRGKLKTPETICYEIFREILREARAYQAVGYRVLANQRVVDRLLDEESGNVAELESFIGRTIRFQVETMYSQEQY
DVVLL
>Mature_484_residues
SEEILINITPMESRVAVVENGVLQEVHVERTQRRGIVGNIYKGKVVRVLPGMQAAFIDIGLDRAAFIHASEISMREGPAV
ESIASLVHDGQSLVVQVTKDPIGSKGARLTTQLSIPSRYLVYMPRTAHVGISLKIEDEAERERLKKVVSDCVAQEGIKEA
GGFILRTAAEGAGADEILMDIRYLRRLWDQIGEQIKTVSPPTVIYEDLGLALRTLRDLVSPRIEKIRIDSRETFQKTTQF
VAELMPEIADRLEHYPGERPIFDLYGVEDEIQKALERKVPLKSGGYLVIDPAEAMSTIDVNTGAFVGHRNLEETIFKTNL
EAATAIARQLRLRNLGGIIIIDFIDMEDGEHQRQVLRTLEKQLERDHAKTNIIGITELGLVQMTRKRTRESLEQVLCEPC
HCCAGRGKLKTPETICYEIFREILREARAYQAVGYRVLANQRVVDRLLDEESGNVAELESFIGRTIRFQVETMYSQEQYD
VVLL

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=494, Percent_Identity=56.2753036437247, Blast_Score=550, Evalue=1e-158,
Organism=Escherichia coli, GI1787325, Length=466, Percent_Identity=35.4077253218884, Blast_Score=265, Evalue=5e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 54664; Mature: 54533

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEEILINITPMESRVAVVENGVLQEVHVERTQRRGIVGNIYKGKVVRVLPGMQAAFIDI
CCCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEHEEE
GLDRAAFIHASEISMREGPAVESIASLVHDGQSLVVQVTKDPIGSKGARLTTQLSIPSRY
CCCCHHEEEHHHCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEECCCCEE
LVYMPRTAHVGISLKIEDEAERERLKKVVSDCVAQEGIKEAGGFILRTAAEGAGADEILM
EEEECCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHH
DIRYLRRLWDQIGEQIKTVSPPTVIYEDLGLALRTLRDLVSPRIEKIRIDSRETFQKTTQ
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHEEECCCHHHHHHHHH
FVAELMPEIADRLEHYPGERPIFDLYGVEDEIQKALERKVPLKSGGYLVIDPAEAMSTID
HHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCEEEEECHHHHHEEE
VNTGAFVGHRNLEETIFKTNLEAATAIARQLRLRNLGGIIIIDFIDMEDGEHQRQVLRTL
CCCCCEEECCCHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHH
EKQLERDHAKTNIIGITELGLVQMTRKRTRESLEQVLCEPCHCCAGRGKLKTPETICYEI
HHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHH
FREILREARAYQAVGYRVLANQRVVDRLLDEESGNVAELESFIGRTIRFQVETMYSQEQY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEEEHHHHCCCCC
DVVLL
CEEEC
>Mature Secondary Structure 
SEEILINITPMESRVAVVENGVLQEVHVERTQRRGIVGNIYKGKVVRVLPGMQAAFIDI
CCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEHEEE
GLDRAAFIHASEISMREGPAVESIASLVHDGQSLVVQVTKDPIGSKGARLTTQLSIPSRY
CCCCHHEEEHHHCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEECCCCEE
LVYMPRTAHVGISLKIEDEAERERLKKVVSDCVAQEGIKEAGGFILRTAAEGAGADEILM
EEEECCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHH
DIRYLRRLWDQIGEQIKTVSPPTVIYEDLGLALRTLRDLVSPRIEKIRIDSRETFQKTTQ
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHEEECCCHHHHHHHHH
FVAELMPEIADRLEHYPGERPIFDLYGVEDEIQKALERKVPLKSGGYLVIDPAEAMSTID
HHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCEEEEECHHHHHEEE
VNTGAFVGHRNLEETIFKTNLEAATAIARQLRLRNLGGIIIIDFIDMEDGEHQRQVLRTL
CCCCCEEECCCHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHH
EKQLERDHAKTNIIGITELGLVQMTRKRTRESLEQVLCEPCHCCAGRGKLKTPETICYEI
HHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHH
FREILREARAYQAVGYRVLANQRVVDRLLDEESGNVAELESFIGRTIRFQVETMYSQEQY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEEEHHHHCCCCC
DVVLL
CEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]