| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66047371
Identifier: 66047371
GI number: 66047371
Start: 4932561
End: 4933133
Strand: Direct
Name: 66047371
Synonym: Psyr_4144
Alternate gene names: NA
Gene position: 4932561-4933133 (Clockwise)
Preceding gene: 66047370
Following gene: 66047372
Centisome position: 80.95
GC content: 54.28
Gene sequence:
>573_bases ATGTTCACTAAAAAAATTCGCAAGTTCCTGCTTCTCGGGGTACTGGCGCTGCTGCTGGCAGCGGTCGGTTACTGGAACAT CAGCCCGGAAAGCTTCATGGACCAGCCTGATGCGTCGCTTGACGACACGGCGATCGACTACTATGCGATCAATACTCGCA GCGTGCAGTACCTGCCAGACGGCACACTTCAGTACGACATGACCTCCGACAAGGTCGAGCATGTGAAGGCCACAGATGTG AGCCTGCTGACGACACCCAATCTGAACATGTACCGCGGCGGAGCATTTCCGTGGCACGTGCAAAGCAAACGAGGTGAAGT TTCGTCCGACGGCGATCAGGTCGAGCTGATGGATTCCGTTCGTGTTGAACGCACCGATGAAAAACAGCGCACGACCATTA TTACCAGCAGCCGCATGACCGTATTTCCTCAGAAGGAATATGCGCAGACCGACCAAGACGTTAGAATCGACGGCGCGGGC GGTGTCACTACGGCCAAGGGAATGAAAGCGTATTTGAAAGACAGCAGGATGGACCTGCTGTCCAACGTAAGAGGACAGTA TGAGGCTCGTTAA
Upstream 100 bases:
>100_bases CGCGAGGCGGCGAAGGTGCAGCGCGCGAATTCTGCGAACTGATTCTGAGTGCGCAAGGCAACCTTGAAGCGGCTCACTCC GCCTATTTATAGAAGCCATT
Downstream 100 bases:
>100_bases AACTCTTCCTTTATTGCTCGGCCTGGGCGCAGCACTGGGAAGCGCGAGCGCCTGGTCCCTGCCAACCGACCGAGATCAGC CTATCCACATCCAGTCTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MFTKKIRKFLLLGVLALLLAAVGYWNISPESFMDQPDASLDDTAIDYYAINTRSVQYLPDGTLQYDMTSDKVEHVKATDV SLLTTPNLNMYRGGAFPWHVQSKRGEVSSDGDQVELMDSVRVERTDEKQRTTIITSSRMTVFPQKEYAQTDQDVRIDGAG GVTTAKGMKAYLKDSRMDLLSNVRGQYEAR
Sequences:
>Translated_190_residues MFTKKIRKFLLLGVLALLLAAVGYWNISPESFMDQPDASLDDTAIDYYAINTRSVQYLPDGTLQYDMTSDKVEHVKATDV SLLTTPNLNMYRGGAFPWHVQSKRGEVSSDGDQVELMDSVRVERTDEKQRTTIITSSRMTVFPQKEYAQTDQDVRIDGAG GVTTAKGMKAYLKDSRMDLLSNVRGQYEAR >Mature_190_residues MFTKKIRKFLLLGVLALLLAAVGYWNISPESFMDQPDASLDDTAIDYYAINTRSVQYLPDGTLQYDMTSDKVEHVKATDV SLLTTPNLNMYRGGAFPWHVQSKRGEVSSDGDQVELMDSVRVERTDEKQRTTIITSSRMTVFPQKEYAQTDQDVRIDGAG GVTTAKGMKAYLKDSRMDLLSNVRGQYEAR
Specific function: Unknown
COG id: COG3117
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21390; Mature: 21390
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTKKIRKFLLLGVLALLLAAVGYWNISPESFMDQPDASLDDTAIDYYAINTRSVQYLPD CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCEEEEEEECCCEEEECCC GTLQYDMTSDKVEHVKATDVSLLTTPNLNMYRGGAFPWHVQSKRGEVSSDGDQVELMDSV CCEEECCCCCHHHHHCCCCEEEEECCCCCEEECCCCCEEECCCCCCCCCCCCEEEEHHHH RVERTDEKQRTTIITSSRMTVFPQKEYAQTDQDVRIDGAGGVTTAKGMKAYLKDSRMDLL CCCCCCCCHHEEEEECCCEEECCCHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHH SNVRGQYEAR HHCCCCCCCC >Mature Secondary Structure MFTKKIRKFLLLGVLALLLAAVGYWNISPESFMDQPDASLDDTAIDYYAINTRSVQYLPD CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCEEEEEEECCCEEEECCC GTLQYDMTSDKVEHVKATDVSLLTTPNLNMYRGGAFPWHVQSKRGEVSSDGDQVELMDSV CCEEECCCCCHHHHHCCCCEEEEECCCCCEEECCCCCEEECCCCCCCCCCCCEEEEHHHH RVERTDEKQRTTIITSSRMTVFPQKEYAQTDQDVRIDGAGGVTTAKGMKAYLKDSRMDLL CCCCCCCCHHEEEEECCCEEECCCHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHH SNVRGQYEAR HHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA