Click here to switch to the map view.

The map label for this gene is yajQ [C]

Identifier: 66047314

GI number: 66047314

Start: 4872975

End: 4873454

Strand: Reverse

Name: yajQ [C]

Synonym: Psyr_4087

Alternate gene names: 66047314

Gene position: 4873454-4872975 (Counterclockwise)

Preceding gene: 66047318

Following gene: 66047313

Centisome position: 79.98

GC content: 55.83

Gene sequence:

>480_bases
ATGCCCTCGTTCGACGTAGTGTCCGAATTGGATAAACACGAAGTCACGAATGCCGTCGACAACGCTATCAAAGAGCTGGA
CCGTCGCTATGACCTGAAAGGCAAAGGCACGTTCGAGTTCAAGGAACTGACTGTCACGCTGACCGCAGAAGCAGACTTCC
AGCTGGAGGCCATGATCGAAATCCTCAAGCTGGCGCTGGTCAAACGCAAGATCGACGCGAAGTGCCTCGAGATCAAGGAC
GCCTACGCCTCCGGCAAATTGATGAAGCAGGAAGTCATCCTCCGTGAAGGCATCGACAAGGAGCTGGCGAAGAAAATCGT
CGCCCATATCAAGGAAGCCAAACTCAAGGTCCAGGCCGCCATTCAGGGCGAGCAGGTGCGGGTGACCGGCAAGAAGCGCG
ACGACCTGCAAGAAGCCATCGCAGCGTTGCGTGCCTACGATTCGGGCATGCCGTTGCAATTCAACAACTTCCGCGACTGA

Upstream 100 bases:

>100_bases
CAGTGAACGCCGGAAAAGTCTCGTTATAATGAGCGTTCTTTCACACCGTCAAGTCATGCGTGCCCGAATTGTGCGCACGC
CGTTTATCTGGAGAACATAC

Downstream 100 bases:

>100_bases
TCGTTGCATTGAAAGCCAGGGAACCCTGCGTTCCCCGGCCAGTCCGAATCGCCCTGAGCATTGAAATGACGGCAGGCCGC
CGTGGTTTTGATCGCAGTTC

Product: putative nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MPSFDVVSELDKHEVTNAVDNAIKELDRRYDLKGKGTFEFKELTVTLTAEADFQLEAMIEILKLALVKRKIDAKCLEIKD
AYASGKLMKQEVILREGIDKELAKKIVAHIKEAKLKVQAAIQGEQVRVTGKKRDDLQEAIAALRAYDSGMPLQFNNFRD

Sequences:

>Translated_159_residues
MPSFDVVSELDKHEVTNAVDNAIKELDRRYDLKGKGTFEFKELTVTLTAEADFQLEAMIEILKLALVKRKIDAKCLEIKD
AYASGKLMKQEVILREGIDKELAKKIVAHIKEAKLKVQAAIQGEQVRVTGKKRDDLQEAIAALRAYDSGMPLQFNNFRD
>Mature_158_residues
PSFDVVSELDKHEVTNAVDNAIKELDRRYDLKGKGTFEFKELTVTLTAEADFQLEAMIEILKLALVKRKIDAKCLEIKDA
YASGKLMKQEVILREGIDKELAKKIVAHIKEAKLKVQAAIQGEQVRVTGKKRDDLQEAIAALRAYDSGMPLQFNNFRD

Specific function: Unknown

COG id: COG1666

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0234 family

Homologues:

Organism=Escherichia coli, GI87081737, Length=163, Percent_Identity=46.6257668711656, Blast_Score=147, Evalue=4e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4087_PSEU2 (Q4ZP05)

Other databases:

- EMBL:   CP000075
- RefSeq:   YP_237155.1
- HSSP:   P44096
- ProteinModelPortal:   Q4ZP05
- SMR:   Q4ZP05
- STRING:   Q4ZP05
- GeneID:   3369623
- GenomeReviews:   CP000075_GR
- KEGG:   psb:Psyr_4087
- NMPDR:   fig|205918.4.peg.4522
- eggNOG:   COG1666
- HOGENOM:   HBG290634
- OMA:   LQFTNYR
- ProtClustDB:   PRK05412
- BioCyc:   PSYR205918:PSYR_4087-MONOMER
- HAMAP:   MF_00632
- InterPro:   IPR007551

Pfam domain/function: PF04461 DUF520

EC number: NA

Molecular weight: Translated: 17979; Mature: 17848

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSFDVVSELDKHEVTNAVDNAIKELDRRYDLKGKGTFEFKELTVTLTAEADFQLEAMIE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCHHHHHHH
ILKLALVKRKIDAKCLEIKDAYASGKLMKQEVILREGIDKELAKKIVAHIKEAKLKVQAA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEE
IQGEQVRVTGKKRDDLQEAIAALRAYDSGMPLQFNNFRD
ECCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PSFDVVSELDKHEVTNAVDNAIKELDRRYDLKGKGTFEFKELTVTLTAEADFQLEAMIE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCHHHHHHH
ILKLALVKRKIDAKCLEIKDAYASGKLMKQEVILREGIDKELAKKIVAHIKEAKLKVQAA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEE
IQGEQVRVTGKKRDDLQEAIAALRAYDSGMPLQFNNFRD
ECCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA