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The map label for this gene is ydhP [H]

Identifier: 66047279

GI number: 66047279

Start: 4834440

End: 4835606

Strand: Direct

Name: ydhP [H]

Synonym: Psyr_4052

Alternate gene names: 66047279

Gene position: 4834440-4835606 (Clockwise)

Preceding gene: 66047278

Following gene: 66047280

Centisome position: 79.34

GC content: 63.75

Gene sequence:

>1167_bases
GTGCCTCTTTCGCTACTCATTCTGGCCCTGAGCGCCTTCGCCATCGGCACCACCGAATTCGTCATCATGGGCCTGCTGCC
TGATGTGGCGGCTGACCTTGGCGTATCGATCCCCGGTGCCGGCTGGCTGGTGACCGGCTATGCGCTGGGTGTCGCCGTCG
GTGCGCCGTTCATGGCCATGGCCACGGCAAAACTGCCGCGCAAGGCTGCGCTGGTCACGCTGATGGGGATTTTCATCATT
GGCAATCTGCTCTGTGCGCTGGCCAGTGACTACAACGTCCTGATGTTCGCCCGCGTGGTGACTGCGCTGTGTCACGGTGC
GTTCTTTGGCATCGGCTCGGTGGTTGCCGCAGGTCTGGTGCCCGCCAACCGGCGTGCCTCAGCGGTGGCCTTGATGTTCA
CCGGCCTGACCCTGGCCAACGTACTGGGCGTGCCGCTGGGCACTGCGCTGGGTCAATACGCAGGCTGGCGCTCGACCTTC
TGGGCTGTCACGGTCATCGGCGTGATTGCGCTGATCGGCCTGATCCGCTTCCTGCCAACCAACCGCAATGAAGAAAAGCT
CGATATGCGCGCTGAACTGGGCGCTCTCCGCGGTGCCGGCATCTGGCTGTCGCTGACCATGACTGCGCTGTTCTCGGCGT
CCATGTTCACCCTGTTCACTTACATTGCCCCACTGCTCGGCGAAGTCACCGGTGTATCGCCCAACGGCGTGACCTGGACC
CTGCTGCTCATCGGTCTGGGCCTGACCGCCGGCAACGTGATCGGCGGCAAGATGGCCGACCGCCGCCTGTCATCCACGCT
GATTGGCGTGTTCGTCTCGATGGCGGTGATCTCCACCATACTCAGCTGGACCAGCGCCGCGCTGATCCCGACTGAAATCA
CCCTGTTCCTCTGGGCAGTCGCGGCCTTCGCTGCCGTCCCGGCGCTGCAGATCAACGTGGTGACCTTCGGTAAGGCGGCA
CCCAACCTGGTTTCAACCTTGAACATCGGCGCCTTCAACGTCGGCAACGCACTCGGCGCCTGGGTCGGTGGCAGCGTCAT
CGCCCACGGTCTGGGCCTGACCAGCGTACCGCTGGCGGCAGCCGTACTGGCAGTGCTGGCGCTGCTGATCACCCTGATTA
CTTTCCGTCAGACCGGCAATCCGGATCTGGCACACGCTACGCATTGA

Upstream 100 bases:

>100_bases
TTCCGACGCAACGAAGAAGTCATACAGGCATTCGTTCAGGCGCTGGTTGAAGAACTGAACAACCCGACCTGATTTTTCAA
CGTTTACCAGGAGCTGCCCC

Downstream 100 bases:

>100_bases
TCAATTACGAGGATTCGATACATGACGACTATCTTTGACCCGATCACCCTGGGCGATCTGCAACTGCCCAACCGCATCAT
CATGGCCCCACTGACGCGCT

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MPLSLLILALSAFAIGTTEFVIMGLLPDVAADLGVSIPGAGWLVTGYALGVAVGAPFMAMATAKLPRKAALVTLMGIFII
GNLLCALASDYNVLMFARVVTALCHGAFFGIGSVVAAGLVPANRRASAVALMFTGLTLANVLGVPLGTALGQYAGWRSTF
WAVTVIGVIALIGLIRFLPTNRNEEKLDMRAELGALRGAGIWLSLTMTALFSASMFTLFTYIAPLLGEVTGVSPNGVTWT
LLLIGLGLTAGNVIGGKMADRRLSSTLIGVFVSMAVISTILSWTSAALIPTEITLFLWAVAAFAAVPALQINVVTFGKAA
PNLVSTLNIGAFNVGNALGAWVGGSVIAHGLGLTSVPLAAAVLAVLALLITLITFRQTGNPDLAHATH

Sequences:

>Translated_388_residues
MPLSLLILALSAFAIGTTEFVIMGLLPDVAADLGVSIPGAGWLVTGYALGVAVGAPFMAMATAKLPRKAALVTLMGIFII
GNLLCALASDYNVLMFARVVTALCHGAFFGIGSVVAAGLVPANRRASAVALMFTGLTLANVLGVPLGTALGQYAGWRSTF
WAVTVIGVIALIGLIRFLPTNRNEEKLDMRAELGALRGAGIWLSLTMTALFSASMFTLFTYIAPLLGEVTGVSPNGVTWT
LLLIGLGLTAGNVIGGKMADRRLSSTLIGVFVSMAVISTILSWTSAALIPTEITLFLWAVAAFAAVPALQINVVTFGKAA
PNLVSTLNIGAFNVGNALGAWVGGSVIAHGLGLTSVPLAAAVLAVLALLITLITFRQTGNPDLAHATH
>Mature_387_residues
PLSLLILALSAFAIGTTEFVIMGLLPDVAADLGVSIPGAGWLVTGYALGVAVGAPFMAMATAKLPRKAALVTLMGIFIIG
NLLCALASDYNVLMFARVVTALCHGAFFGIGSVVAAGLVPANRRASAVALMFTGLTLANVLGVPLGTALGQYAGWRSTFW
AVTVIGVIALIGLIRFLPTNRNEEKLDMRAELGALRGAGIWLSLTMTALFSASMFTLFTYIAPLLGEVTGVSPNGVTWTL
LLIGLGLTAGNVIGGKMADRRLSSTLIGVFVSMAVISTILSWTSAALIPTEITLFLWAVAAFAAVPALQINVVTFGKAAP
NLVSTLNIGAFNVGNALGAWVGGSVIAHGLGLTSVPLAAAVLAVLALLITLITFRQTGNPDLAHATH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=378, Percent_Identity=46.8253968253968, Blast_Score=289, Evalue=2e-79,
Organism=Escherichia coli, GI1786595, Length=369, Percent_Identity=33.8753387533875, Blast_Score=206, Evalue=3e-54,
Organism=Escherichia coli, GI1787808, Length=376, Percent_Identity=31.9148936170213, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI145693198, Length=356, Percent_Identity=26.685393258427, Blast_Score=102, Evalue=6e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 39856; Mature: 39725

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PLSLLILALSAFAIGTTEFVIMGLLPDVAADLGVSIPGAGWLVTGYALGVAVGAPFMAM
CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHH
ATAKLPRKAALVTLMGIFIIGNLLCALASDYNVLMFARVVTALCHGAFFGIGSVVAAGLV
HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PANRRASAVALMFTGLTLANVLGVPLGTALGQYAGWRSTFWAVTVIGVIALIGLIRFLPT
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
NRNEEKLDMRAELGALRGAGIWLSLTMTALFSASMFTLFTYIAPLLGEVTGVSPNGVTWT
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
LLLIGLGLTAGNVIGGKMADRRLSSTLIGVFVSMAVISTILSWTSAALIPTEITLFLWAV
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAFAAVPALQINVVTFGKAAPNLVSTLNIGAFNVGNALGAWVGGSVIAHGLGLTSVPLAA
HHHHHCCCCEEEEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH
AVLAVLALLITLITFRQTGNPDLAHATH
HHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]