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The map label for this gene is ybzH [H]

Identifier: 66047278

GI number: 66047278

Start: 4834097

End: 4834411

Strand: Direct

Name: ybzH [H]

Synonym: Psyr_4051

Alternate gene names: 66047278

Gene position: 4834097-4834411 (Clockwise)

Preceding gene: 66047276

Following gene: 66047279

Centisome position: 79.33

GC content: 56.83

Gene sequence:

>315_bases
ATGCCTATCGACCTCGACGACATAATAAAAGCCCTGGCCCACCCGGTCCGCCGAGAAATCCTGACCTGGCTGAAAGACCC
GCGTGCAAGCTTTCCCGCCCAGGAGTACTCGATCGAACACGGTGTGTGTGCCGGACAGATCGATCAGCGTGCGGGATTGT
CACAATCCACTGTCTCGGCCCATCTGGCGACTTTGCAACGCGCTGGCCTGATCAGCAGCAAGAAGGTCGGCCAATGGCAT
TTCTTCCGACGCAACGAAGAAGTCATACAGGCATTCGTTCAGGCGCTGGTTGAAGAACTGAACAACCCGACCTGA

Upstream 100 bases:

>100_bases
TTGACCCATCCTAAGCACATAATCATATTTGTATATCGCGAAATACAGATATAAGGTTCGCTCTATCGCGATATAACGCT
ACACCGCCTGTGAGAACGAC

Downstream 100 bases:

>100_bases
TTTTTCAACGTTTACCAGGAGCTGCCCCGTGCCTCTTTCGCTACTCATTCTGGCCCTGAGCGCCTTCGCCATCGGCACCA
CCGAATTCGTCATCATGGGC

Product: regulatory protein, ArsR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MPIDLDDIIKALAHPVRREILTWLKDPRASFPAQEYSIEHGVCAGQIDQRAGLSQSTVSAHLATLQRAGLISSKKVGQWH
FFRRNEEVIQAFVQALVEELNNPT

Sequences:

>Translated_104_residues
MPIDLDDIIKALAHPVRREILTWLKDPRASFPAQEYSIEHGVCAGQIDQRAGLSQSTVSAHLATLQRAGLISSKKVGQWH
FFRRNEEVIQAFVQALVEELNNPT
>Mature_103_residues
PIDLDDIIKALAHPVRREILTWLKDPRASFPAQEYSIEHGVCAGQIDQRAGLSQSTVSAHLATLQRAGLISSKKVGQWHF
FRRNEEVIQAFVQALVEELNNPT

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 11675; Mature: 11544

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIDLDDIIKALAHPVRREILTWLKDPRASFPAQEYSIEHGVCAGQIDQRAGLSQSTVSA
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHCCCCHHHHHH
HLATLQRAGLISSKKVGQWHFFRRNEEVIQAFVQALVEELNNPT
HHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PIDLDDIIKALAHPVRREILTWLKDPRASFPAQEYSIEHGVCAGQIDQRAGLSQSTVSA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHCCCCHHHHHH
HLATLQRAGLISSKKVGQWHFFRRNEEVIQAFVQALVEELNNPT
HHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]