| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is plsC [H]
Identifier: 66047276
GI number: 66047276
Start: 4832581
End: 4833375
Strand: Direct
Name: plsC [H]
Synonym: Psyr_4049
Alternate gene names: 66047276
Gene position: 4832581-4833375 (Clockwise)
Preceding gene: 66047275
Following gene: 66047278
Centisome position: 79.3
GC content: 63.65
Gene sequence:
>795_bases ATGAGCCGGTTGCGCGGCTATGCCCGCGTAGTCCGGGTGCTACTGGTCGTAGCGCTCGGATTGACGATTGCCAGCGCGTT CGCGGTCCTGGAACGTACCAGAATCGGAGGTTCGATGGAGCGCAGACAGCGCTGGAGCCGCTGGTTCATGGCGCGACTGA CCAACGCCCTGCCGTTTCGCGTCACCGTGACAGGTCAACTGCCGACCCAGCCCATGCTGTGGGTCAGCAATCATGTGTCA TGGACCGACATCGCCCTGCTCGGCATGCTCGCGCCGCTGTCGTTTCTGTCGAAGGCCGAAGTACGCACCTGGCCGGTAGC GGGCTGGCTGGCGCTGAAGGCCGGTACGCTGTTCATTCGTCGCGGATCGGGCGACAGCCGTCTGATCCAGAAGCAGATGT GCAACCACCTGCAACAAGGCAACGCACTGCTGATCTTCCCCGAAGGCACCACCACGGACGGCAAAAGCCTGCGCACCTTT CACGGTCGTCTGCTGTCCAGCGCCATCGACGCTGGCGTGCCGATTCAGCCGGTGGCCATTGGTTACTCGCGTGACGGCAA ACCGGACCCGATAGCCCCGTTCATTGGCGACGATGACCTGCTGTCGCATTTGCGCCGACTGTTCGCCAACGAGCAGAGCG ACGTGCATATTCACTTGCTGACACCGATCCCGACCGCTGACCAGGAACGTGCCGCACTGGCCTTCAAGGCCCAGCAGGCG GTTCAAGTGGCGTTGTTTGGCGAGCCGCAGGCTCAGCCGAGCGAAGTGGTTTCGCGGCCGGCCCGAGCGGCCTGA
Upstream 100 bases:
>100_bases CGTGCTGGGACGAAGACTTCCAGGTGGCCGACGTGTTCATCCTGCTCAAGCGCGACGACCTGTGCCCGCGCTATGCCCGC CACTTCAAGGCGGCCGTGTG
Downstream 100 bases:
>100_bases GCGAAATTCTCGAGCAGCGGATAGAACTCGGCGAAATCCGCACTCAAGGGCTGGTAAAGCGCCTGCAGTTCCTGCATGCC GCCGGCCAGCCCTTCGGGTC
Product: phospholipid/glycerol acyltransferase
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; Lysophosphatidic acid acyltransferase; LPAAT [H]
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MSRLRGYARVVRVLLVVALGLTIASAFAVLERTRIGGSMERRQRWSRWFMARLTNALPFRVTVTGQLPTQPMLWVSNHVS WTDIALLGMLAPLSFLSKAEVRTWPVAGWLALKAGTLFIRRGSGDSRLIQKQMCNHLQQGNALLIFPEGTTTDGKSLRTF HGRLLSSAIDAGVPIQPVAIGYSRDGKPDPIAPFIGDDDLLSHLRRLFANEQSDVHIHLLTPIPTADQERAALAFKAQQA VQVALFGEPQAQPSEVVSRPARAA
Sequences:
>Translated_264_residues MSRLRGYARVVRVLLVVALGLTIASAFAVLERTRIGGSMERRQRWSRWFMARLTNALPFRVTVTGQLPTQPMLWVSNHVS WTDIALLGMLAPLSFLSKAEVRTWPVAGWLALKAGTLFIRRGSGDSRLIQKQMCNHLQQGNALLIFPEGTTTDGKSLRTF HGRLLSSAIDAGVPIQPVAIGYSRDGKPDPIAPFIGDDDLLSHLRRLFANEQSDVHIHLLTPIPTADQERAALAFKAQQA VQVALFGEPQAQPSEVVSRPARAA >Mature_263_residues SRLRGYARVVRVLLVVALGLTIASAFAVLERTRIGGSMERRQRWSRWFMARLTNALPFRVTVTGQLPTQPMLWVSNHVSW TDIALLGMLAPLSFLSKAEVRTWPVAGWLALKAGTLFIRRGSGDSRLIQKQMCNHLQQGNALLIFPEGTTTDGKSLRTFH GRLLSSAIDAGVPIQPVAIGYSRDGKPDPIAPFIGDDDLLSHLRRLFANEQSDVHIHLLTPIPTADQERAALAFKAQQAV QVALFGEPQAQPSEVVSRPARAA
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating acyl moiety at the 2 position [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.51 [H]
Molecular weight: Translated: 29046; Mature: 28915
Theoretical pI: Translated: 11.48; Mature: 11.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLRGYARVVRVLLVVALGLTIASAFAVLERTRIGGSMERRQRWSRWFMARLTNALPFR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEE VTVTGQLPTQPMLWVSNHVSWTDIALLGMLAPLSFLSKAEVRTWPVAGWLALKAGTLFIR EEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEEECCEEEEE RGSGDSRLIQKQMCNHLQQGNALLIFPEGTTTDGKSLRTFHGRLLSSAIDAGVPIQPVAI ECCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEE GYSRDGKPDPIAPFIGDDDLLSHLRRLFANEQSDVHIHLLTPIPTADQERAALAFKAQQA ECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH VQVALFGEPQAQPSEVVSRPARAA EEEEEECCCCCCHHHHHCCCCCCC >Mature Secondary Structure SRLRGYARVVRVLLVVALGLTIASAFAVLERTRIGGSMERRQRWSRWFMARLTNALPFR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEE VTVTGQLPTQPMLWVSNHVSWTDIALLGMLAPLSFLSKAEVRTWPVAGWLALKAGTLFIR EEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEEECCEEEEE RGSGDSRLIQKQMCNHLQQGNALLIFPEGTTTDGKSLRTFHGRLLSSAIDAGVPIQPVAI ECCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEE GYSRDGKPDPIAPFIGDDDLLSHLRRLFANEQSDVHIHLLTPIPTADQERAALAFKAQQA ECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH VQVALFGEPQAQPSEVVSRPARAA EEEEEECCCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8748025 [H]