| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66047275
Identifier: 66047275
GI number: 66047275
Start: 4831826
End: 4832581
Strand: Direct
Name: 66047275
Synonym: Psyr_4048
Alternate gene names: NA
Gene position: 4831826-4832581 (Clockwise)
Preceding gene: 66047270
Following gene: 66047276
Centisome position: 79.29
GC content: 62.7
Gene sequence:
>756_bases ATGACCCAGATCGCCCGCATTCGTGACAACACTTCTGAACGTCGTCTTCAGGCCGAGCGCCTGATTGGAGCGCGCGCCTT GCAGGAAGCACAGGCGTTGCGTTTCAGTGTGTTCAGCGAAGAGTTCAACGCTCGTCTCAACGGCGCGGAACAAGGCCTGG ACATCGACGATTACGATGTTCACTGCTCGCACATCGGGGTACGCGACCTGAACACCGGGCGTCTGGTTGCCACGACCCGG CTGCTCGACCACCAGGCCGCCAACACGCTGGGGCGCTTCTACAGCGAAGAAGAGTTCAGCCTGCACGGGCTGGTCAATCT GCAAGGGCCGATCCTCGAACTGGGTCGCACCTGCGTCGATCCGGCCTACCGCAACGGCGGCACCATTGCGGTGTTGTGGA GCGAACTGGCCGAGGTGCTCAACGAAGGCGGCTACAGCTACCTGATGGGCTGCGCGAGCATCCCGATGCAGGACGGCGGT ATTCAGGCCCATGCGATCATGCAACGCCTGCGCGAACGCTACCTGTGCAACGAGCACCTGCGCGCCGAACCGAAGAATCC GCTGCCGACCCTCGACATCCCGAGCAATGTGATCTGCGAGATGCCACCGCTGCTCAAGGCCTACATGCGTCTGGGGGCCA AGATCTGTGGCGAACCGTGCTGGGACGAAGACTTCCAGGTGGCCGACGTGTTCATCCTGCTCAAGCGCGACGACCTGTGC CCGCGCTATGCCCGCCACTTCAAGGCGGCCGTGTGA
Upstream 100 bases:
>100_bases TGACACGCCATCTCCCTAGCCTGCAGTTACGGCAAAGCGCCTGGACAAATCAGTCAACCAGCCCTTTCTGCATCTGCAAG GCTGGCTCATGGAGATTCGT
Downstream 100 bases:
>100_bases TGAGCCGGTTGCGCGGCTATGCCCGCGTAGTCCGGGTGCTACTGGTCGTAGCGCTCGGATTGACGATTGCCAGCGCGTTC GCGGTCCTGGAACGTACCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Hemolysin; Hemolysin-Like Protein; Ornithine-Acyl(Acyl Carrier Protein) N-Acyltransferase; Phospholipid/Glycerol Acyltransferase; Ornithine-Acyl(Acyl Carrier Protein) N- Acyltransferase; Ornithine-Acyl N-Acyltransferase; Phosphohistidine Phosphatase SixA; Acyltransferase Domain Protein; Hemolysin Protein; Acyl-CoA N-Acyltransferase; Acyl-CoA N-Acyltransferases Superfamily Protein; Nudix Hydrolase
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MTQIARIRDNTSERRLQAERLIGARALQEAQALRFSVFSEEFNARLNGAEQGLDIDDYDVHCSHIGVRDLNTGRLVATTR LLDHQAANTLGRFYSEEEFSLHGLVNLQGPILELGRTCVDPAYRNGGTIAVLWSELAEVLNEGGYSYLMGCASIPMQDGG IQAHAIMQRLRERYLCNEHLRAEPKNPLPTLDIPSNVICEMPPLLKAYMRLGAKICGEPCWDEDFQVADVFILLKRDDLC PRYARHFKAAV
Sequences:
>Translated_251_residues MTQIARIRDNTSERRLQAERLIGARALQEAQALRFSVFSEEFNARLNGAEQGLDIDDYDVHCSHIGVRDLNTGRLVATTR LLDHQAANTLGRFYSEEEFSLHGLVNLQGPILELGRTCVDPAYRNGGTIAVLWSELAEVLNEGGYSYLMGCASIPMQDGG IQAHAIMQRLRERYLCNEHLRAEPKNPLPTLDIPSNVICEMPPLLKAYMRLGAKICGEPCWDEDFQVADVFILLKRDDLC PRYARHFKAAV >Mature_250_residues TQIARIRDNTSERRLQAERLIGARALQEAQALRFSVFSEEFNARLNGAEQGLDIDDYDVHCSHIGVRDLNTGRLVATTRL LDHQAANTLGRFYSEEEFSLHGLVNLQGPILELGRTCVDPAYRNGGTIAVLWSELAEVLNEGGYSYLMGCASIPMQDGGI QAHAIMQRLRERYLCNEHLRAEPKNPLPTLDIPSNVICEMPPLLKAYMRLGAKICGEPCWDEDFQVADVFILLKRDDLCP RYARHFKAAV
Specific function: Unknown
COG id: COG3176
COG function: function code R; Putative hemolysin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28231; Mature: 28099
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQIARIRDNTSERRLQAERLIGARALQEAQALRFSVFSEEFNARLNGAEQGLDIDDYDV CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCE HCSHIGVRDLNTGRLVATTRLLDHQAANTLGRFYSEEEFSLHGLVNLQGPILELGRTCVD EEEEECCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHCC PAYRNGGTIAVLWSELAEVLNEGGYSYLMGCASIPMQDGGIQAHAIMQRLRERYLCNEHL HHHCCCCEEEEHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH RAEPKNPLPTLDIPSNVICEMPPLLKAYMRLGAKICGEPCWDEDFQVADVFILLKRDDLC CCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEHEEEEEECCCCC PRYARHFKAAV HHHHHHHHCCC >Mature Secondary Structure TQIARIRDNTSERRLQAERLIGARALQEAQALRFSVFSEEFNARLNGAEQGLDIDDYDV CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCE HCSHIGVRDLNTGRLVATTRLLDHQAANTLGRFYSEEEFSLHGLVNLQGPILELGRTCVD EEEEECCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHCC PAYRNGGTIAVLWSELAEVLNEGGYSYLMGCASIPMQDGGIQAHAIMQRLRERYLCNEHL HHHCCCCEEEEHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH RAEPKNPLPTLDIPSNVICEMPPLLKAYMRLGAKICGEPCWDEDFQVADVFILLKRDDLC CCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEHEEEEEECCCCC PRYARHFKAAV HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA