| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is kgtP [H]
Identifier: 66047237
GI number: 66047237
Start: 4776902
End: 4778203
Strand: Reverse
Name: kgtP [H]
Synonym: Psyr_4010
Alternate gene names: 66047237
Gene position: 4778203-4776902 (Counterclockwise)
Preceding gene: 66047238
Following gene: 66047233
Centisome position: 78.41
GC content: 58.99
Gene sequence:
>1302_bases ATGACTACAACATCAGAAGCACCGCATTACACCGGCGAGGAGCGAAGCAAAAGAATTTTCGCGATTGTCGGCGCCTCATC CGGCAACCTGGTCGAATGGTTCGACTTCTATATCTACGCCTTCTGCGCGATTTATTTCGCACCGGCTTTCTTCCCTTCCG ATGATCCGACCGTTCAGTTGCTCAACACCGCGGGTGTGTTTGCCGCTGGCTTTCTGATGCGTCCGATTGGCGGCTGGCTG TTTGGTCGTGTCGCGGACAAACATGGGCGCAAGAACTCCATGCTGATTTCGGTCACCATGATGTGTGCCGGATCACTGAT CATCGCCTGCCTGCCGACCTATGCGTCGATTGGTGCCTGGGCGCCGGCCTTGCTGCTGATGGCGCGCCTGCTGCAAGGTC TGTCGGTAGGTGGCGAGTACGGCACCACGGCCACCTACATGAGTGAAGTGGCGCTACGTGGCCAGCGCGGCTTTTATGCT TCGTTCCAGTACGTGACCCTGATCGGCGGGCAACTGCTGGCCGTGTTGACGGTGGTCATCCTCCAGCAATTCCTGACCAC CGAAGAGTTGCGTGACTACGGCTGGCGCATCCCCTTCGTGATCGGTGCTGGCGCTGCGGTCATTGCCTTGCTGCTGCGTC GCACCCTCAATGAAACCACCACGGCCGAAAGCCGGCAGGATAAGGACGCGGGCAGTATCGCGGCACTGTTCAAGCATCAT GCGGCTGCCTTCATCACCGTGCTGGGTTACACCGCCGGTGGCTCGCTGATTTTCTACACCTTCACGACCTACATGCAGAA ATACCTGGTCAACACCGGGGGCATGGAAGCCAAGACCGCCAGCTACATCATGACCGGCGCGCTGTTTCTATACATGTGCA TGCAGCCGTTCTTCGGCATGCTCGCGGACCGCATCGGCCGTCGCAATTCGATGCTCCTGTTCGGCGCGCTGGGTACGCTG TGTACAGTGCCGATCCTGATGACGCTCAAGACCACCACCAACCCGTTCATTGCCTTCGTGCTGATTACCCTGGCGCTGGC GATCGTCAGCTTCTACACCTCGATCAGCGGGCTGGTCAAAGCCGAGATGTTTCCGCCTCAGGTTCGTGCGCTGGGCGTGG GGCTGGCGTATGCGGTGGCCAACGCGGTGTTCGGCGGCTCGGCTGAGTGGGTTGCCCTGAAGCTCAAGAGTGCCGGAATG GAAAACAGCTTTTACTGGTACGTGACGGCGATGATGGCGGTAGCGTTCCTGTTCAGTCTGCGTTTGCCCAAAGAGCCCAA GTACCTGCATCAGGATCACTGA
Upstream 100 bases:
>100_bases TACCGCTATTCCTGTCGGCTGAATTGGCCTGATTGATTGTGCTCGATTAAAGACGGTGTTACAGATTGTTTCTTATGGAC AGTTCTGCTTGGGGAAAATA
Downstream 100 bases:
>100_bases TCGCAGGTGTGTTTCGGCCATAAAAAAACCCACCTGATCAGGTGGGTTTTTTATGCACTGCAATCAGAACAACTGAACCG AAGGCTTCTCCTTGGAGATG
Product: citrate-proton symport
Products: Proton [Cytoplasm]; 2-oxoglutarate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MTTTSEAPHYTGEERSKRIFAIVGASSGNLVEWFDFYIYAFCAIYFAPAFFPSDDPTVQLLNTAGVFAAGFLMRPIGGWL FGRVADKHGRKNSMLISVTMMCAGSLIIACLPTYASIGAWAPALLLMARLLQGLSVGGEYGTTATYMSEVALRGQRGFYA SFQYVTLIGGQLLAVLTVVILQQFLTTEELRDYGWRIPFVIGAGAAVIALLLRRTLNETTTAESRQDKDAGSIAALFKHH AAAFITVLGYTAGGSLIFYTFTTYMQKYLVNTGGMEAKTASYIMTGALFLYMCMQPFFGMLADRIGRRNSMLLFGALGTL CTVPILMTLKTTTNPFIAFVLITLALAIVSFYTSISGLVKAEMFPPQVRALGVGLAYAVANAVFGGSAEWVALKLKSAGM ENSFYWYVTAMMAVAFLFSLRLPKEPKYLHQDH
Sequences:
>Translated_433_residues MTTTSEAPHYTGEERSKRIFAIVGASSGNLVEWFDFYIYAFCAIYFAPAFFPSDDPTVQLLNTAGVFAAGFLMRPIGGWL FGRVADKHGRKNSMLISVTMMCAGSLIIACLPTYASIGAWAPALLLMARLLQGLSVGGEYGTTATYMSEVALRGQRGFYA SFQYVTLIGGQLLAVLTVVILQQFLTTEELRDYGWRIPFVIGAGAAVIALLLRRTLNETTTAESRQDKDAGSIAALFKHH AAAFITVLGYTAGGSLIFYTFTTYMQKYLVNTGGMEAKTASYIMTGALFLYMCMQPFFGMLADRIGRRNSMLLFGALGTL CTVPILMTLKTTTNPFIAFVLITLALAIVSFYTSISGLVKAEMFPPQVRALGVGLAYAVANAVFGGSAEWVALKLKSAGM ENSFYWYVTAMMAVAFLFSLRLPKEPKYLHQDH >Mature_432_residues TTTSEAPHYTGEERSKRIFAIVGASSGNLVEWFDFYIYAFCAIYFAPAFFPSDDPTVQLLNTAGVFAAGFLMRPIGGWLF GRVADKHGRKNSMLISVTMMCAGSLIIACLPTYASIGAWAPALLLMARLLQGLSVGGEYGTTATYMSEVALRGQRGFYAS FQYVTLIGGQLLAVLTVVILQQFLTTEELRDYGWRIPFVIGAGAAVIALLLRRTLNETTTAESRQDKDAGSIAALFKHHA AAFITVLGYTAGGSLIFYTFTTYMQKYLVNTGGMEAKTASYIMTGALFLYMCMQPFFGMLADRIGRRNSMLLFGALGTLC TVPILMTLKTTTNPFIAFVLITLALAIVSFYTSISGLVKAEMFPPQVRALGVGLAYAVANAVFGGSAEWVALKLKSAGME NSFYWYVTAMMAVAFLFSLRLPKEPKYLHQDH
Specific function: Uptake of alpha-ketoglutarate across the boundary membrane with the concomitant import of a cation (symport system) [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1788942, Length=426, Percent_Identity=67.3708920187793, Blast_Score=548, Evalue=1e-157, Organism=Escherichia coli, GI1790550, Length=408, Percent_Identity=31.1274509803922, Blast_Score=200, Evalue=1e-52, Organism=Escherichia coli, GI1788292, Length=392, Percent_Identity=32.3979591836735, Blast_Score=182, Evalue=4e-47, Organism=Escherichia coli, GI1789941, Length=444, Percent_Identity=31.0810810810811, Blast_Score=159, Evalue=4e-40, Organism=Escherichia coli, GI87082231, Length=326, Percent_Identity=26.9938650306748, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI87082404, Length=315, Percent_Identity=25.7142857142857, Blast_Score=75, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 47237; Mature: 47106
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTSEAPHYTGEERSKRIFAIVGASSGNLVEWFDFYIYAFCAIYFAPAFFPSDDPTVQL CCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE LNTAGVFAAGFLMRPIGGWLFGRVADKHGRKNSMLISVTMMCAGSLIIACLPTYASIGAW EHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH APALLLMARLLQGLSVGGEYGTTATYMSEVALRGQRGFYASFQYVTLIGGQLLAVLTVVI HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH LQQFLTTEELRDYGWRIPFVIGAGAAVIALLLRRTLNETTTAESRQDKDAGSIAALFKHH HHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH AAAFITVLGYTAGGSLIFYTFTTYMQKYLVNTGGMEAKTASYIMTGALFLYMCMQPFFGM HHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LADRIGRRNSMLLFGALGTLCTVPILMTLKTTTNPFIAFVLITLALAIVSFYTSISGLVK HHHHHCCCCCEEEHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AEMFPPQVRALGVGLAYAVANAVFGGSAEWVALKLKSAGMENSFYWYVTAMMAVAFLFSL HHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH RLPKEPKYLHQDH CCCCCCCCCCCCC >Mature Secondary Structure TTTSEAPHYTGEERSKRIFAIVGASSGNLVEWFDFYIYAFCAIYFAPAFFPSDDPTVQL CCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE LNTAGVFAAGFLMRPIGGWLFGRVADKHGRKNSMLISVTMMCAGSLIIACLPTYASIGAW EHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH APALLLMARLLQGLSVGGEYGTTATYMSEVALRGQRGFYASFQYVTLIGGQLLAVLTVVI HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH LQQFLTTEELRDYGWRIPFVIGAGAAVIALLLRRTLNETTTAESRQDKDAGSIAALFKHH HHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH AAAFITVLGYTAGGSLIFYTFTTYMQKYLVNTGGMEAKTASYIMTGALFLYMCMQPFFGM HHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LADRIGRRNSMLLFGALGTLCTVPILMTLKTTTNPFIAFVLITLALAIVSFYTSISGLVK HHHHHCCCCCEEEHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AEMFPPQVRALGVGLAYAVANAVFGGSAEWVALKLKSAGMENSFYWYVTAMMAVAFLFSL HHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH RLPKEPKYLHQDH CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 2-oxoglutarate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 2-oxoglutarate [Periplasm] = Proton [Cytoplasm] + 2-oxoglutarate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2118499; 9205837; 9278503; 1709493; 2190187; 2053984; 8419306 [H]