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The map label for this gene is ynfA [C]

Identifier: 66046980

GI number: 66046980

Start: 4469978

End: 4470310

Strand: Reverse

Name: ynfA [C]

Synonym: Psyr_3752

Alternate gene names: 66046980

Gene position: 4470310-4469978 (Counterclockwise)

Preceding gene: 66046981

Following gene: 66046979

Centisome position: 73.36

GC content: 60.66

Gene sequence:

>333_bases
ATGCTCAATTACCTGTGGTTTTTCCTCGCTGCTCTGTTCGAGATATTCGGTTGCTATGCCTTCTGGCTGTGGTTACGTCA
GGGCAAGAGCGCGCTGTGGGTGATTCCTGCGCTTGTCAGCCTGACGGTGTTTGCACTGTTGCTGACACGTGTGGAGGCGG
CTTATGCGGGCCGAGCCTATGCGGCGTATGGCGGGATCTACATTGTTGCGTCGATTGCCTGGCTGGGGCTGGTCGAGCGG
GTCAGGCCGCTGGGCACGGACTGGCTGGGTCTGGCGTTCTGCGTCATCGGTGCGACCATCATTCTGCTGGGGCCGCGTTG
GTCCGCCGCTTGA

Upstream 100 bases:

>100_bases
GTGCGACGCTCTGCGTCCTCTTGGGTGGTATCAAGGTCATGACTGCACTGTTTTCTGATAGGGTTGCGCGCACCTTGCAG
CCCTGACCTGAGAACCTTTC

Downstream 100 bases:

>100_bases
TTAACCACTGCCGCGAACGATATTTCCCACGGATTTGGCTGGAAAGTAAGACGTTTCCTTCAGTCTTTTCCGGTGCTGTT
GCAGGACGTTACTGATTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MLNYLWFFLAALFEIFGCYAFWLWLRQGKSALWVIPALVSLTVFALLLTRVEAAYAGRAYAAYGGIYIVASIAWLGLVER
VRPLGTDWLGLAFCVIGATIILLGPRWSAA

Sequences:

>Translated_110_residues
MLNYLWFFLAALFEIFGCYAFWLWLRQGKSALWVIPALVSLTVFALLLTRVEAAYAGRAYAAYGGIYIVASIAWLGLVER
VRPLGTDWLGLAFCVIGATIILLGPRWSAA
>Mature_110_residues
MLNYLWFFLAALFEIFGCYAFWLWLRQGKSALWVIPALVSLTVFALLLTRVEAAYAGRAYAAYGGIYIVASIAWLGLVER
VRPLGTDWLGLAFCVIGATIILLGPRWSAA

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family [H]

Homologues:

Organism=Escherichia coli, GI1787865, Length=98, Percent_Identity=42.8571428571429, Blast_Score=72, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003844 [H]

Pfam domain/function: PF02694 UPF0060 [H]

EC number: NA

Molecular weight: Translated: 12221; Mature: 12221

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNYLWFFLAALFEIFGCYAFWLWLRQGKSALWVIPALVSLTVFALLLTRVEAAYAGRAY
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AAYGGIYIVASIAWLGLVERVRPLGTDWLGLAFCVIGATIILLGPRWSAA
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLNYLWFFLAALFEIFGCYAFWLWLRQGKSALWVIPALVSLTVFALLLTRVEAAYAGRAY
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AAYGGIYIVASIAWLGLVERVRPLGTDWLGLAFCVIGATIILLGPRWSAA
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA