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The map label for this gene is ybfB [H]

Identifier: 66046900

GI number: 66046900

Start: 4357799

End: 4359007

Strand: Reverse

Name: ybfB [H]

Synonym: Psyr_3671

Alternate gene names: 66046900

Gene position: 4359007-4357799 (Counterclockwise)

Preceding gene: 66046901

Following gene: 66046899

Centisome position: 71.53

GC content: 62.37

Gene sequence:

>1209_bases
ATGACATCGATCTGGCGTACCAGTGGCTGGGTTCTGCTGGGGAGTGCGCTGATTCTTGCGCTTTCGTTGGGTACGCGGCA
CGGCTTCGGTCTGTTTCTGGCGCCCATGAGCGCCGAGTTTGGCTGGGGACGCGAAGTCTTTGCCTTTGCCATCGCTCTGC
AGAATCTGATGTGGGGCCTGGCACAGCCCTTCGCCGGGGCGCTGGCAGATCGATTCGGGGCGGCGAAAGTCGTCTTCGTC
GGCGGTGTGCTGTATGCCGCAGGTCTGTTGTGCATGAGTACCGCCGATTCTTCCCTCAGCCTTTCATTGAGCGCCGGTCT
GCTGATCGGTATCGGTCTGTCCGGCACATCGTTTTCGGTCATCCTGGGGGTCGTGGGGCGTGCGCTGCCTGCGGAAAAAC
GCAGTATGGGCATGGGTATCGCCAGCGCAGCCGGCTCATTCGGTCAGTTCGCCATGCTGCCCGGTACATTGGGCCTGATC
AGCTGGCTGGGCTGGTCCGGCGCCTTGCTGGTGCTGGGCGTGATGGTGGCGTTGATCCTGCCTCTGGTGGGCATGCTCAA
GGATACGCCGAGCGTATCCACCGGCGTCGAGCTGACCCTCGGCGAGGCGCTGCGTGAAGCGTGCTCGCATTCGGGGTTCT
GGCTGCTGGCACTGGGGTTCTTCGTCTGCGGCTTTCAAGTGGTATTCATTGGCGTGCACTTACCGGCGTATCTGGTGGAT
CAGCACCTGCCCGCCAAGGTCGGCACTACAGTGCTGGCCCTGATCGGCCTGTTCAATATCTTCGGCACCTACACCGCAGG
CTGGCTGGGCGGGCGCATGTCCAAGCCCCGGCTGCTGACCGTGCTTTACCTGTTGCGCGCGGTAGTAATCGTATTGTTTC
TGTGGATACCCTTGAGCCAGACCACGGCGTATCTGTTCGGCGTGGCGATGGGCTTGCTGTGGCTGTCCACCGTGCCGCTG
ACCAACGGTACGGTCGCGACACTGTTCGGTGTGCGCAACCTGTCGATGCTGGGCGGCATTGTCTTTTTGTTTCACCAGTT
AGGCGCCTTCCTCGGTGGCTGGCTGGGCGGGCTGGTATATGACCGTACCGGCAGCTACGACCTGATCTGGCAAGTCTCGA
TACTCCTGAGTCTGCTCGCCGCGGCACTCAACTGGCCGGTGCGCGAGCGCCCGGTGGAACGCTTGCAGGCGCAGGGCAGT
CTGGCATGA

Upstream 100 bases:

>100_bases
GAGACCCTGCGCAACGCTTTGTTGACAGCTTTTACCGGCAGCGCGTAGCTTCGCCAATCGCGGGTAAAACCATGTAACAC
ACAGCGCAGGGAGCTCAACC

Downstream 100 bases:

>100_bases
GTCGGCGCTGGCCGTTGCTGGCGGCGCTGCTGGTGGGCGCGGTGGTGCTGGGATTGCTCTTGTGGGCCTGGCAGCATGTC
GGGCTGGCCGCATTGCAACT

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MTSIWRTSGWVLLGSALILALSLGTRHGFGLFLAPMSAEFGWGREVFAFAIALQNLMWGLAQPFAGALADRFGAAKVVFV
GGVLYAAGLLCMSTADSSLSLSLSAGLLIGIGLSGTSFSVILGVVGRALPAEKRSMGMGIASAAGSFGQFAMLPGTLGLI
SWLGWSGALLVLGVMVALILPLVGMLKDTPSVSTGVELTLGEALREACSHSGFWLLALGFFVCGFQVVFIGVHLPAYLVD
QHLPAKVGTTVLALIGLFNIFGTYTAGWLGGRMSKPRLLTVLYLLRAVVIVLFLWIPLSQTTAYLFGVAMGLLWLSTVPL
TNGTVATLFGVRNLSMLGGIVFLFHQLGAFLGGWLGGLVYDRTGSYDLIWQVSILLSLLAAALNWPVRERPVERLQAQGS
LA

Sequences:

>Translated_402_residues
MTSIWRTSGWVLLGSALILALSLGTRHGFGLFLAPMSAEFGWGREVFAFAIALQNLMWGLAQPFAGALADRFGAAKVVFV
GGVLYAAGLLCMSTADSSLSLSLSAGLLIGIGLSGTSFSVILGVVGRALPAEKRSMGMGIASAAGSFGQFAMLPGTLGLI
SWLGWSGALLVLGVMVALILPLVGMLKDTPSVSTGVELTLGEALREACSHSGFWLLALGFFVCGFQVVFIGVHLPAYLVD
QHLPAKVGTTVLALIGLFNIFGTYTAGWLGGRMSKPRLLTVLYLLRAVVIVLFLWIPLSQTTAYLFGVAMGLLWLSTVPL
TNGTVATLFGVRNLSMLGGIVFLFHQLGAFLGGWLGGLVYDRTGSYDLIWQVSILLSLLAAALNWPVRERPVERLQAQGS
LA
>Mature_401_residues
TSIWRTSGWVLLGSALILALSLGTRHGFGLFLAPMSAEFGWGREVFAFAIALQNLMWGLAQPFAGALADRFGAAKVVFVG
GVLYAAGLLCMSTADSSLSLSLSAGLLIGIGLSGTSFSVILGVVGRALPAEKRSMGMGIASAAGSFGQFAMLPGTLGLIS
WLGWSGALLVLGVMVALILPLVGMLKDTPSVSTGVELTLGEALREACSHSGFWLLALGFFVCGFQVVFIGVHLPAYLVDQ
HLPAKVGTTVLALIGLFNIFGTYTAGWLGGRMSKPRLLTVLYLLRAVVIVLFLWIPLSQTTAYLFGVAMGLLWLSTVPLT
NGTVATLFGVRNLSMLGGIVFLFHQLGAFLGGWLGGLVYDRTGSYDLIWQVSILLSLLAAALNWPVRERPVERLQAQGSL
A

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Homo sapiens, GI42475555, Length=369, Percent_Identity=28.7262872628726, Blast_Score=79, Evalue=9e-15,
Organism=Homo sapiens, GI291621700, Length=394, Percent_Identity=22.8426395939086, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI24431958, Length=431, Percent_Identity=22.5058004640371, Blast_Score=66, Evalue=6e-11,
Organism=Escherichia coli, GI1789969, Length=416, Percent_Identity=25.2403846153846, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42387; Mature: 42256

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSIWRTSGWVLLGSALILALSLGTRHGFGLFLAPMSAEFGWGREVFAFAIALQNLMWGL
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
AQPFAGALADRFGAAKVVFVGGVLYAAGLLCMSTADSSLSLSLSAGLLIGIGLSGTSFSV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCCHHHH
ILGVVGRALPAEKRSMGMGIASAAGSFGQFAMLPGTLGLISWLGWSGALLVLGVMVALIL
HHHHHHCCCCCHHHHHCCCHHHHCCCCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHH
PLVGMLKDTPSVSTGVELTLGEALREACSHSGFWLLALGFFVCGFQVVFIGVHLPAYLVD
HHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QHLPAKVGTTVLALIGLFNIFGTYTAGWLGGRMSKPRLLTVLYLLRAVVIVLFLWIPLSQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHH
TTAYLFGVAMGLLWLSTVPLTNGTVATLFGVRNLSMLGGIVFLFHQLGAFLGGWLGGLVY
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DRTGSYDLIWQVSILLSLLAAALNWPVRERPVERLQAQGSLA
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TSIWRTSGWVLLGSALILALSLGTRHGFGLFLAPMSAEFGWGREVFAFAIALQNLMWGL
CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
AQPFAGALADRFGAAKVVFVGGVLYAAGLLCMSTADSSLSLSLSAGLLIGIGLSGTSFSV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCCHHHH
ILGVVGRALPAEKRSMGMGIASAAGSFGQFAMLPGTLGLISWLGWSGALLVLGVMVALIL
HHHHHHCCCCCHHHHHCCCHHHHCCCCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHH
PLVGMLKDTPSVSTGVELTLGEALREACSHSGFWLLALGFFVCGFQVVFIGVHLPAYLVD
HHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QHLPAKVGTTVLALIGLFNIFGTYTAGWLGGRMSKPRLLTVLYLLRAVVIVLFLWIPLSQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHH
TTAYLFGVAMGLLWLSTVPLTNGTVATLFGVRNLSMLGGIVFLFHQLGAFLGGWLGGLVY
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DRTGSYDLIWQVSILLSLLAAALNWPVRERPVERLQAQGSLA
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]