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The map label for this gene is yebR [H]

Identifier: 66046839

GI number: 66046839

Start: 4293968

End: 4294450

Strand: Reverse

Name: yebR [H]

Synonym: Psyr_3610

Alternate gene names: 66046839

Gene position: 4294450-4293968 (Counterclockwise)

Preceding gene: 66046840

Following gene: 66046836

Centisome position: 70.47

GC content: 58.8

Gene sequence:

>483_bases
ATGATTGATTTGCAAAACACCGGCGCGGGCCTGGACGGCTATGGTTTGCTGGCCGCACAACTGGAAGCACTGTTGGCCGA
CGAACGCGATTTCATTGCCAATGCGGCGCAGTTTTCGGCGTTTCTCTACACCCAGCTCGATGATCTGAACTGGGCAGGCT
TTTACCTCAATCGCAACGAAGAACTGGTGCTGGGTCCGTTTCAAGGGCAGATCGCCTGCGTACGCATTCCTTTCGGCCGG
GGCGTTTGCGGGGCGGCGGCGCAGAGCCGACAAACCCAGCGTGTGCAGGACGTTCACGAGTTTCCCGGGCACATTGCCTG
CGACAGCGCATCGAACAGCGAGTTGGTGGTGCCATTGATCAAGGAGGGACGTCTGATCGGTGTGCTGGACCTGGACAGTC
CGAGTGTGGGGCGTTTCAACGAAGAGGATCAGGCAGGGATCGAGCGTCTTGTGGCGATCTTTCTGGCATCGACCGACTGC
TGA

Upstream 100 bases:

>100_bases
CCGCGATTCGCTGGGCAACCGCGCGCGGTAATCGCAATGGCCGCTGCGCCTATCAATTTGCACGTTACTGGGTAGGACTT
GAATTGTTGGAGCAACACAC

Downstream 100 bases:

>100_bases
TCCGGTCGGCCGCTGCCCGGAGCACAAGTCCGGCAGCGGCGGGGCAGTCATCAATCGTAGATGACTTTCTTCTTCCATTC
CGATTCGGTGTCGTCCTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MIDLQNTGAGLDGYGLLAAQLEALLADERDFIANAAQFSAFLYTQLDDLNWAGFYLNRNEELVLGPFQGQIACVRIPFGR
GVCGAAAQSRQTQRVQDVHEFPGHIACDSASNSELVVPLIKEGRLIGVLDLDSPSVGRFNEEDQAGIERLVAIFLASTDC

Sequences:

>Translated_160_residues
MIDLQNTGAGLDGYGLLAAQLEALLADERDFIANAAQFSAFLYTQLDDLNWAGFYLNRNEELVLGPFQGQIACVRIPFGR
GVCGAAAQSRQTQRVQDVHEFPGHIACDSASNSELVVPLIKEGRLIGVLDLDSPSVGRFNEEDQAGIERLVAIFLASTDC
>Mature_160_residues
MIDLQNTGAGLDGYGLLAAQLEALLADERDFIANAAQFSAFLYTQLDDLNWAGFYLNRNEELVLGPFQGQIACVRIPFGR
GVCGAAAQSRQTQRVQDVHEFPGHIACDSASNSELVVPLIKEGRLIGVLDLDSPSVGRFNEEDQAGIERLVAIFLASTDC

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=149, Percent_Identity=57.0469798657718, Blast_Score=175, Evalue=1e-45,
Organism=Saccharomyces cerevisiae, GI6322781, Length=131, Percent_Identity=44.2748091603053, Blast_Score=120, Evalue=8e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 17317; Mature: 17317

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: PS01320 UPF0067

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDLQNTGAGLDGYGLLAAQLEALLADERDFIANAAQFSAFLYTQLDDLNWAGFYLNRNE
CCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEECCCCCEEEEEEECCC
ELVLGPFQGQIACVRIPFGRGVCGAAAQSRQTQRVQDVHEFPGHIACDSASNSELVVPLI
EEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEE
KEGRLIGVLDLDSPSVGRFNEEDQAGIERLVAIFLASTDC
CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIDLQNTGAGLDGYGLLAAQLEALLADERDFIANAAQFSAFLYTQLDDLNWAGFYLNRNE
CCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEECCCCCEEEEEEECCC
ELVLGPFQGQIACVRIPFGRGVCGAAAQSRQTQRVQDVHEFPGHIACDSASNSELVVPLI
EEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEE
KEGRLIGVLDLDSPSVGRFNEEDQAGIERLVAIFLASTDC
CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 10493123 [H]