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The map label for this gene is 66046840

Identifier: 66046840

GI number: 66046840

Start: 4294447

End: 4295337

Strand: Reverse

Name: 66046840

Synonym: Psyr_3611

Alternate gene names: NA

Gene position: 4295337-4294447 (Counterclockwise)

Preceding gene: 66046842

Following gene: 66046839

Centisome position: 70.49

GC content: 61.28

Gene sequence:

>891_bases
GTGGATTCTCGGTTGGATGCTTTTCTGCAGCGCGCCGACGCCGTGCTGGCCCGACTGGAGCCGTTGCTGCCAGCGCTGCG
CGAGCCAGTCGACTGGTCGCAGGCGCTGGCCGCGCGCTGGGTGCAAGAGGGCCGCAGCGGTTACCTGATGCCGCTGCAAG
TGAGCCTCGATACGCGCCTGACCGATCTGATCGGCGTCGACCTGCAGCGCGATCAGTTGGGGCGCAATACCCGTCAGTTC
ATCGACGGGCTGCCTGCCAACCATGCCTTGCTCTGGGGTTCGCGCGGCACCGGCAAGTCGTCCTTGATCCGCGCGCTGCT
GGCCGAGTACGCCCCGGCCGGTCTGCGCCTGATCGAGATCGAACGAGACCATCTGGGTGATTTGCCGCGTGTGGTTGAAC
AACTGCACAAGCTGCCGCAGCGTTTCGTGCTGTTCTGCGATGACCTGTCGTTCGAGTCGGGCGAGGGTGATTATCGCGTG
CTGAAGAGTGTACTCGACGGCTCGCTGGAGCAGGCGCCAGACAACGTGCTGCTGTACGCGACCTCCAATCGTCGTCACCT
GGTGCCCGAGAAGGAAAGTGACAACGTCGACTGGAAGCACGTTGACGGCGAACTGCACCCCAGTGAGGCCGTCGAAGACA
AGATCGCCTTGTCTGACCGGTTCGGGCTGTGGCTGTCGTTCTATCCGTTCACTCAGGAGCATTATCTGAACGTCGTCGAA
CACTGGATCACGCAATTAGCGCAAAAAGCCGGATTGCAGTGGCAGCGCGACGAAAACCTGGAAAAAGCCGCGATTCGCTG
GGCAACCGCGCGCGGTAATCGCAATGGCCGCTGCGCCTATCAATTTGCACGTTACTGGGTAGGACTTGAATTGTTGGAGC
AACACACATGA

Upstream 100 bases:

>100_bases
GAGCGATATATCCATGAGTACTGCCACTTCTGGTGCCCGGTGCCGGCCAAGCATAGCCGATCGGCACTGCTGACTAATCA
GTTAAATATAAGGAGATCCC

Downstream 100 bases:

>100_bases
TTGATTTGCAAAACACCGGCGCGGGCCTGGACGGCTATGGTTTGCTGGCCGCACAACTGGAAGCACTGTTGGCCGACGAA
CGCGATTTCATTGCCAATGC

Product: hypothetical protein

Products: NA

Alternate protein names: ATP-Dependent Protease Subunit; AAA ATPase Family Protein; AAA Family ATPase; ABC Transporter ATPase; ATPase Family Protein; ATPase Of AAA+ Class; Intermediate Filament Protein; AAA+ Superfamily ATPase; AAA ATPase Superfamily

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MDSRLDAFLQRADAVLARLEPLLPALREPVDWSQALAARWVQEGRSGYLMPLQVSLDTRLTDLIGVDLQRDQLGRNTRQF
IDGLPANHALLWGSRGTGKSSLIRALLAEYAPAGLRLIEIERDHLGDLPRVVEQLHKLPQRFVLFCDDLSFESGEGDYRV
LKSVLDGSLEQAPDNVLLYATSNRRHLVPEKESDNVDWKHVDGELHPSEAVEDKIALSDRFGLWLSFYPFTQEHYLNVVE
HWITQLAQKAGLQWQRDENLEKAAIRWATARGNRNGRCAYQFARYWVGLELLEQHT

Sequences:

>Translated_296_residues
MDSRLDAFLQRADAVLARLEPLLPALREPVDWSQALAARWVQEGRSGYLMPLQVSLDTRLTDLIGVDLQRDQLGRNTRQF
IDGLPANHALLWGSRGTGKSSLIRALLAEYAPAGLRLIEIERDHLGDLPRVVEQLHKLPQRFVLFCDDLSFESGEGDYRV
LKSVLDGSLEQAPDNVLLYATSNRRHLVPEKESDNVDWKHVDGELHPSEAVEDKIALSDRFGLWLSFYPFTQEHYLNVVE
HWITQLAQKAGLQWQRDENLEKAAIRWATARGNRNGRCAYQFARYWVGLELLEQHT
>Mature_296_residues
MDSRLDAFLQRADAVLARLEPLLPALREPVDWSQALAARWVQEGRSGYLMPLQVSLDTRLTDLIGVDLQRDQLGRNTRQF
IDGLPANHALLWGSRGTGKSSLIRALLAEYAPAGLRLIEIERDHLGDLPRVVEQLHKLPQRFVLFCDDLSFESGEGDYRV
LKSVLDGSLEQAPDNVLLYATSNRRHLVPEKESDNVDWKHVDGELHPSEAVEDKIALSDRFGLWLSFYPFTQEHYLNVVE
HWITQLAQKAGLQWQRDENLEKAAIRWATARGNRNGRCAYQFARYWVGLELLEQHT

Specific function: Unknown

COG id: COG2607

COG function: function code R; Predicted ATPase (AAA+ superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33858; Mature: 33858

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSRLDAFLQRADAVLARLEPLLPALREPVDWSQALAARWVQEGRSGYLMPLQVSLDTRL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCHHH
TDLIGVDLQRDQLGRNTRQFIDGLPANHALLWGSRGTGKSSLIRALLAEYAPAGLRLIEI
HHHHCCCCCHHHHCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEE
ERDHLGDLPRVVEQLHKLPQRFVLFCDDLSFESGEGDYRVLKSVLDGSLEQAPDNVLLYA
CHHHCCCHHHHHHHHHHHHHHHEEHHCCCCCCCCCCHHHHHHHHHCCHHHHCCCCEEEEE
TSNRRHLVPEKESDNVDWKHVDGELHPSEAVEDKIALSDRFGLWLSFYPFTQEHYLNVVE
ECCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHH
HWITQLAQKAGLQWQRDENLEKAAIRWATARGNRNGRCAYQFARYWVGLELLEQHT
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDSRLDAFLQRADAVLARLEPLLPALREPVDWSQALAARWVQEGRSGYLMPLQVSLDTRL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCHHH
TDLIGVDLQRDQLGRNTRQFIDGLPANHALLWGSRGTGKSSLIRALLAEYAPAGLRLIEI
HHHHCCCCCHHHHCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEE
ERDHLGDLPRVVEQLHKLPQRFVLFCDDLSFESGEGDYRVLKSVLDGSLEQAPDNVLLYA
CHHHCCCHHHHHHHHHHHHHHHEEHHCCCCCCCCCCHHHHHHHHHCCHHHHCCCCEEEEE
TSNRRHLVPEKESDNVDWKHVDGELHPSEAVEDKIALSDRFGLWLSFYPFTQEHYLNVVE
ECCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHH
HWITQLAQKAGLQWQRDENLEKAAIRWATARGNRNGRCAYQFARYWVGLELLEQHT
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA