| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046773
Identifier: 66046773
GI number: 66046773
Start: 4221692
End: 4222666
Strand: Reverse
Name: 66046773
Synonym: Psyr_3544
Alternate gene names: NA
Gene position: 4222666-4221692 (Counterclockwise)
Preceding gene: 66046774
Following gene: 66046771
Centisome position: 69.3
GC content: 62.56
Gene sequence:
>975_bases ATGAACACACTTCTGATTTATGGCGCTACGGGCTACACCGGGCGTATGGCCGCAGAGCGGGCCAGGGCGCTCGGCCTGAA GGTAGAAATCGCCGGACGCAATCAGCAGCGCCTCGCCTCCCTCGCTGCGCAACTGGACGTGAAATACCGGGTTTTCGATG CCGACCAGGCCGAGGGTTTTTTGTCCGGCATCTCGGTGTTGCTCAACTTCGCAGGGCCATTTGTGCAGACCGCCGAGCCG TTGATGCGCGCCTGTATCAAGGCCGGTGTCGACTACCTCGACATCACCGCCGAGATCAACGTTTACCGGCTGGCCGAAAG GCTGGGCGCTGAAGCGGCGGCAAGTCAGGTCATGCTGTTGCCGGGTGTCGGTTGGGATGTCGTGCCTACCGATTCGCTGG CCGTGCAGGTTGCCGGGCGCGTGCAGGGGCCAACGGCGCTGAACATGGCGCTGCAGGTGCCAGGGTCGATGTCCCGCGGG TCTGCCATGAGTGTCAGCGAAATCATCGGTGCAGGCGTGCTCGCCAGAATCGATGGCGAACTTGTTGCAACGCCGGATGC CGAGCCGCGTCATTTTGACTTTGGTCAGGGCCCGGTCCTTTGCGTACCGTTGTCATTCGGTGATCTGGTCACCGCCTGGC ATTCGACCGGCATCCGCAATATTGCAATGTTCGTGCATATCGCCGGGGACGCGTTCCCGCAAGGCGATCTGTCACAACTG CCTGATGGCCCGACGCCCGAGCAAAGGGAGGCGCATCGGGCGCGTGCAGTGGTTGAGGTGACCGATGCGAAGGGCGCGAT CGCACGTTCCATGATCGAGACCGTGAACGGCTATACCTATACGCCGCTGGCGGCCGTAGAGGCTGCGCGTCGCGTGCTCG ACGGCGAACGGCTGCCGGGTTTTGTCACACCGGCCAAGGTCTTCGGTGGCGGTTTCGCCGAGAGCATTGCCGGTACGCTC GTGACTGACATGTAA
Upstream 100 bases:
>100_bases GGCGACCCATGCTCGATCATAGCGTTCTACGCGCAACAGCCGTTCTGTACCCCGATGGCTACAGCCCCGACTTCGTCTCG AAAAAAAGGCAGCACGTCCA
Downstream 100 bases:
>100_bases CAACTGGGGCGACGGCTCACGACACGGCCGTCAATTCATCTGCGGGCGTCCTGAATCTTGCAGCGTCCCGCGCCGGTGGC AGGCCGAACAGCCGCGCGTA
Product: putative integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MNTLLIYGATGYTGRMAAERARALGLKVEIAGRNQQRLASLAAQLDVKYRVFDADQAEGFLSGISVLLNFAGPFVQTAEP LMRACIKAGVDYLDITAEINVYRLAERLGAEAAASQVMLLPGVGWDVVPTDSLAVQVAGRVQGPTALNMALQVPGSMSRG SAMSVSEIIGAGVLARIDGELVATPDAEPRHFDFGQGPVLCVPLSFGDLVTAWHSTGIRNIAMFVHIAGDAFPQGDLSQL PDGPTPEQREAHRARAVVEVTDAKGAIARSMIETVNGYTYTPLAAVEAARRVLDGERLPGFVTPAKVFGGGFAESIAGTL VTDM
Sequences:
>Translated_324_residues MNTLLIYGATGYTGRMAAERARALGLKVEIAGRNQQRLASLAAQLDVKYRVFDADQAEGFLSGISVLLNFAGPFVQTAEP LMRACIKAGVDYLDITAEINVYRLAERLGAEAAASQVMLLPGVGWDVVPTDSLAVQVAGRVQGPTALNMALQVPGSMSRG SAMSVSEIIGAGVLARIDGELVATPDAEPRHFDFGQGPVLCVPLSFGDLVTAWHSTGIRNIAMFVHIAGDAFPQGDLSQL PDGPTPEQREAHRARAVVEVTDAKGAIARSMIETVNGYTYTPLAAVEAARRVLDGERLPGFVTPAKVFGGGFAESIAGTL VTDM >Mature_324_residues MNTLLIYGATGYTGRMAAERARALGLKVEIAGRNQQRLASLAAQLDVKYRVFDADQAEGFLSGISVLLNFAGPFVQTAEP LMRACIKAGVDYLDITAEINVYRLAERLGAEAAASQVMLLPGVGWDVVPTDSLAVQVAGRVQGPTALNMALQVPGSMSRG SAMSVSEIIGAGVLARIDGELVATPDAEPRHFDFGQGPVLCVPLSFGDLVTAWHSTGIRNIAMFVHIAGDAFPQGDLSQL PDGPTPEQREAHRARAVVEVTDAKGAIARSMIETVNGYTYTPLAAVEAARRVLDGERLPGFVTPAKVFGGGFAESIAGTL VTDM
Specific function: Involved in the reduction of the double bond between C-4 and C-5 during phthiocerol dimycocerosates (DIM A) and glycosylated phenolphthiocerol dimycocerosates (PGL) biosynthesis [H]
COG id: COG3268
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the saccharopine dehydrogenase family. Enoyl reductase subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR005097 [H]
Pfam domain/function: PF03435 Saccharop_dh [H]
EC number: NA
Molecular weight: Translated: 34125; Mature: 34125
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLLIYGATGYTGRMAAERARALGLKVEIAGRNQQRLASLAAQLDVKYRVFDADQAEGF CCEEEEECCCCCCCHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHCEEEEEECCHHHHHH LSGISVLLNFAGPFVQTAEPLMRACIKAGVDYLDITAEINVYRLAERLGAEAAASQVMLL HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCHHHHCCEEEE PGVGWDVVPTDSLAVQVAGRVQGPTALNMALQVPGSMSRGSAMSVSEIIGAGVLARIDGE CCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCHHHHHCCCEEEEECCC LVATPDAEPRHFDFGQGPVLCVPLSFGDLVTAWHSTGIRNIAMFVHIAGDAFPQGDLSQL EEECCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHC PDGPTPEQREAHRARAVVEVTDAKGAIARSMIETVNGYTYTPLAAVEAARRVLDGERLPG CCCCCCHHHHHHHHHEEEEEECCCHHHHHHHHHHHCCCEECHHHHHHHHHHHHCCCCCCC FVTPAKVFGGGFAESIAGTLVTDM CCCHHHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure MNTLLIYGATGYTGRMAAERARALGLKVEIAGRNQQRLASLAAQLDVKYRVFDADQAEGF CCEEEEECCCCCCCHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHCEEEEEECCHHHHHH LSGISVLLNFAGPFVQTAEPLMRACIKAGVDYLDITAEINVYRLAERLGAEAAASQVMLL HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCHHHHCCEEEE PGVGWDVVPTDSLAVQVAGRVQGPTALNMALQVPGSMSRGSAMSVSEIIGAGVLARIDGE CCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCHHHHHCCCEEEEECCC LVATPDAEPRHFDFGQGPVLCVPLSFGDLVTAWHSTGIRNIAMFVHIAGDAFPQGDLSQL EEECCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHC PDGPTPEQREAHRARAVVEVTDAKGAIARSMIETVNGYTYTPLAAVEAARRVLDGERLPG CCCCCCHHHHHHHHHEEEEEECCCHHHHHHHHHHHCCCEECHHHHHHHHHHHHCCCCCCC FVTPAKVFGGGFAESIAGTLVTDM CCCHHHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]