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The map label for this gene is ccmB [H]

Identifier: 66046621

GI number: 66046621

Start: 4050093

End: 4050764

Strand: Reverse

Name: ccmB [H]

Synonym: Psyr_3392

Alternate gene names: 66046621

Gene position: 4050764-4050093 (Counterclockwise)

Preceding gene: 66046622

Following gene: 66046620

Centisome position: 66.47

GC content: 62.8

Gene sequence:

>672_bases
ATGAGCAATGTGTTTGTCCTGCTGATGCTTCGTGAGGTGCGGCTGCTGGCGAGGCGTCCGGCAGAGCTGACCAACCCGCT
GGTGTTCTTTGCGATCGTGGTCGCCCTGTTCCCGCTGGCGCTGGGACCGCAGACGCAATTGTTGCAAACCTTGTCGCCGG
GGCTGGTCTGGGTGGCGGCACTGCTGGCCGTGCTGCTGTCGCTGGACGGGCTGTTGCGCAGTGATTTCGAGGATGGCTCG
CTGGAGCAGTGGGTCCTTTCGCCGCACCCGCTGGCCCTTCTGGTGCTGATCAAAGTGCTGGCACACTGGGTTTTTTCCGG
GCTGGCACTGGTACTGTTGTCACCTTTGCTGGCATTGATGCTCGGGCTGCCGGTGCAGTGCCTGCCGGTGTTGATGGTTT
CGCTGCTGCTGGGCACCCCGGTGCTCAGCCTGCTGGGCGCATTGGGTGCAGCGTTGACCGTGGGTTTGAAGCGTGGCGGC
CTGCTGCTGGCATTGTTGATTCTGCCGTTGTACATCCCGGTACTGATTCTGGGCAGCGGTGCATTGCAAGCCGCGCTGCA
GGGCATGCCGGCGACCGGCTATCTGCTGTGGCTGGCCAGCCTGGCGGCGTTGGCGATCACCCTGACACCCTTTGCGATAG
CCGCTGGCCTGAAAATCAGCATCGGCGAATAA

Upstream 100 bases:

>100_bases
AGCACTGTGAACACGGCGGCATGATTGTCATGACCACTCACCACAGCCTGAACCGCCTGCCTGCGGGCTATCGGGACCTC
GACCTGGGGCAATGGTCAGC

Downstream 100 bases:

>100_bases
TTGAGGCTCCGGCATCGAGACTTCGATGCCGGTCAACACCCTGGATGCACCCTGATGAAAAGCAACGCCATGAAAAGCAG
CATCGGTTGGGCCTGGCTGC

Product: cytochrome c-type biogenesis protein CcmB

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmB [H]

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MSNVFVLLMLREVRLLARRPAELTNPLVFFAIVVALFPLALGPQTQLLQTLSPGLVWVAALLAVLLSLDGLLRSDFEDGS
LEQWVLSPHPLALLVLIKVLAHWVFSGLALVLLSPLLALMLGLPVQCLPVLMVSLLLGTPVLSLLGALGAALTVGLKRGG
LLLALLILPLYIPVLILGSGALQAALQGMPATGYLLWLASLAALAITLTPFAIAAGLKISIGE

Sequences:

>Translated_223_residues
MSNVFVLLMLREVRLLARRPAELTNPLVFFAIVVALFPLALGPQTQLLQTLSPGLVWVAALLAVLLSLDGLLRSDFEDGS
LEQWVLSPHPLALLVLIKVLAHWVFSGLALVLLSPLLALMLGLPVQCLPVLMVSLLLGTPVLSLLGALGAALTVGLKRGG
LLLALLILPLYIPVLILGSGALQAALQGMPATGYLLWLASLAALAITLTPFAIAAGLKISIGE
>Mature_222_residues
SNVFVLLMLREVRLLARRPAELTNPLVFFAIVVALFPLALGPQTQLLQTLSPGLVWVAALLAVLLSLDGLLRSDFEDGSL
EQWVLSPHPLALLVLIKVLAHWVFSGLALVLLSPLLALMLGLPVQCLPVLMVSLLLGTPVLSLLGALGAALTVGLKRGGL
LLALLILPLYIPVLILGSGALQAALQGMPATGYLLWLASLAALAITLTPFAIAAGLKISIGE

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG2386

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmB/CycW/HelB family [H]

Homologues:

Organism=Escherichia coli, GI1788528, Length=210, Percent_Identity=55.2380952380952, Blast_Score=170, Evalue=8e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003544 [H]

Pfam domain/function: PF03379 CcmB [H]

EC number: NA

Molecular weight: Translated: 23404; Mature: 23273

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNVFVLLMLREVRLLARRPAELTNPLVFFAIVVALFPLALGPQTQLLQTLSPGLVWVAA
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHH
LLAVLLSLDGLLRSDFEDGSLEQWVLSPHPLALLVLIKVLAHWVFSGLALVLLSPLLALM
HHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLPVQCLPVLMVSLLLGTPVLSLLGALGAALTVGLKRGGLLLALLILPLYIPVLILGSG
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCH
ALQAALQGMPATGYLLWLASLAALAITLTPFAIAAGLKISIGE
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCC
>Mature Secondary Structure 
SNVFVLLMLREVRLLARRPAELTNPLVFFAIVVALFPLALGPQTQLLQTLSPGLVWVAA
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHH
LLAVLLSLDGLLRSDFEDGSLEQWVLSPHPLALLVLIKVLAHWVFSGLALVLLSPLLALM
HHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLPVQCLPVLMVSLLLGTPVLSLLGALGAALTVGLKRGGLLLALLILPLYIPVLILGSG
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCH
ALQAALQGMPATGYLLWLASLAALAITLTPFAIAAGLKISIGE
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]