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The map label for this gene is ycdO [H]

Identifier: 66046599

GI number: 66046599

Start: 4029281

End: 4030138

Strand: Direct

Name: ycdO [H]

Synonym: Psyr_3370

Alternate gene names: 66046599

Gene position: 4029281-4030138 (Clockwise)

Preceding gene: 66046598

Following gene: 66046603

Centisome position: 66.12

GC content: 58.28

Gene sequence:

>858_bases
ATGACCTATCCACTCCTGACCCGGAAGACACTCATGAAAAAGACGCCCCTGGCTTTGCTCCTGACCCTTGGCCTGCTCCA
GACCCCACTGGCGGCCTTTGCCGCCACCGCGCCGCTGGATCTGGTAGGCCCGGTGTCGGACTACAAGATCTACGTGACCG
AGAACATTGAAGAGCTGGTCAGCCACACCCAGAAATTCACCGATGCCGTGAAGAAAGGCGACATCGCGACAGCCAAAAAG
CTCTACGCCCCTACCCGCGTGTACTACGAGTCGGTAGAACCGATTGCCGAACTGTTCAGTGACCTGGACGCCTCCATCGA
CTCACGCGTCGACGACCATGAACAAGGCGTGGCGGCGGAAGACTTCACTGGCTTCCATCGTCTGGAATATGCGCTGTTCT
CGCAGAACACCACGAAGGATCAGGGCCCTATCGCCGACAAGCTGTTGAGCGACGTCAAGGACCTGGAAAAGCGCGTGGCC
GACCTGACCTTCCCGCCTGAAAAAGTCGTCGGCGGCGCAGCAGCCCTGCTGGAAGAAGTGGCAGCGACCAAGATCTCCGG
CGAAGAAGACCGCTACAGCCACACCGACCTGTATGACTTCCAGGGCAACATCGACGGCGCGAAAAAAATCGTCGACCTGT
TCCGTCCGCAGATCGAACAGCAGGACAAGGCCTTTTCCAGCAAAGTCGACAAGAACTTCGCCACCGTGGACAAGATCCTC
GCCAAGTACAAGACCAAGGACGGTGGCTTTGAAACCTACGACAAAGTCAAAGAAAACGATCGCAAAGCCCTGGTCGGCCC
GGTCAACACCCTGGCAGAAGACCTCTCGACCCTGCGCGGCAAGCTGGGCCTGAACTGA

Upstream 100 bases:

>100_bases
CGGTCGGTGGCGGCTATTTCTTCACCCTGCCGGGGGTAACCGGCGACCAGGATTTCATCGGTCGCTCGCTGCTGGCGGCC
GTAGCGCCCACTAAAAACGC

Downstream 100 bases:

>100_bases
CCTGAAACGCCGCGCCTGCCCAAGGTGCGGCTCTTTGCCCTGCCCGGTGGTTACTGCACCTGAGTGTGACGCAGAGCGTC
ACGAACTGCATTCCCACGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MTYPLLTRKTLMKKTPLALLLTLGLLQTPLAAFAATAPLDLVGPVSDYKIYVTENIEELVSHTQKFTDAVKKGDIATAKK
LYAPTRVYYESVEPIAELFSDLDASIDSRVDDHEQGVAAEDFTGFHRLEYALFSQNTTKDQGPIADKLLSDVKDLEKRVA
DLTFPPEKVVGGAAALLEEVAATKISGEEDRYSHTDLYDFQGNIDGAKKIVDLFRPQIEQQDKAFSSKVDKNFATVDKIL
AKYKTKDGGFETYDKVKENDRKALVGPVNTLAEDLSTLRGKLGLN

Sequences:

>Translated_285_residues
MTYPLLTRKTLMKKTPLALLLTLGLLQTPLAAFAATAPLDLVGPVSDYKIYVTENIEELVSHTQKFTDAVKKGDIATAKK
LYAPTRVYYESVEPIAELFSDLDASIDSRVDDHEQGVAAEDFTGFHRLEYALFSQNTTKDQGPIADKLLSDVKDLEKRVA
DLTFPPEKVVGGAAALLEEVAATKISGEEDRYSHTDLYDFQGNIDGAKKIVDLFRPQIEQQDKAFSSKVDKNFATVDKIL
AKYKTKDGGFETYDKVKENDRKALVGPVNTLAEDLSTLRGKLGLN
>Mature_284_residues
TYPLLTRKTLMKKTPLALLLTLGLLQTPLAAFAATAPLDLVGPVSDYKIYVTENIEELVSHTQKFTDAVKKGDIATAKKL
YAPTRVYYESVEPIAELFSDLDASIDSRVDDHEQGVAAEDFTGFHRLEYALFSQNTTKDQGPIADKLLSDVKDLEKRVAD
LTFPPEKVVGGAAALLEEVAATKISGEEDRYSHTDLYDFQGNIDGAKKIVDLFRPQIEQQDKAFSSKVDKNFATVDKILA
KYKTKDGGFETYDKVKENDRKALVGPVNTLAEDLSTLRGKLGLN

Specific function: Unknown

COG id: COG2822

COG function: function code P; Predicted periplasmic lipoprotein involved in iron transport

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0409 family [H]

Homologues:

Organism=Escherichia coli, GI1787254, Length=293, Percent_Identity=55.9726962457338, Blast_Score=316, Evalue=1e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008972
- InterPro:   IPR018976 [H]

Pfam domain/function: PF09375 Peptidase_M75 [H]

EC number: NA

Molecular weight: Translated: 31498; Mature: 31367

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYPLLTRKTLMKKTPLALLLTLGLLQTPLAAFAATAPLDLVGPVSDYKIYVTENIEELV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEECCCHHHHH
SHTQKFTDAVKKGDIATAKKLYAPTRVYYESVEPIAELFSDLDASIDSRVDDHEQGVAAE
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHH
DFTGFHRLEYALFSQNTTKDQGPIADKLLSDVKDLEKRVADLTFPPEKVVGGAAALLEEV
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
AATKISGEEDRYSHTDLYDFQGNIDGAKKIVDLFRPQIEQQDKAFSSKVDKNFATVDKIL
HHHHCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKYKTKDGGFETYDKVKENDRKALVGPVNTLAEDLSTLRGKLGLN
HHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TYPLLTRKTLMKKTPLALLLTLGLLQTPLAAFAATAPLDLVGPVSDYKIYVTENIEELV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEECCCHHHHH
SHTQKFTDAVKKGDIATAKKLYAPTRVYYESVEPIAELFSDLDASIDSRVDDHEQGVAAE
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHH
DFTGFHRLEYALFSQNTTKDQGPIADKLLSDVKDLEKRVADLTFPPEKVVGGAAALLEEV
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
AATKISGEEDRYSHTDLYDFQGNIDGAKKIVDLFRPQIEQQDKAFSSKVDKNFATVDKIL
HHHHCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKYKTKDGGFETYDKVKENDRKALVGPVNTLAEDLSTLRGKLGLN
HHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA