| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046564
Identifier: 66046564
GI number: 66046564
Start: 3990028
End: 3990999
Strand: Reverse
Name: 66046564
Synonym: Psyr_3335
Alternate gene names: NA
Gene position: 3990999-3990028 (Counterclockwise)
Preceding gene: 66046565
Following gene: 66046559
Centisome position: 65.49
GC content: 57.3
Gene sequence:
>972_bases ATGCAAAAAAAAGCATCTCAGAACGTTAGAGCCTTGACGCATATCGTCGACCCCGTCGGTTCAGGTGTGCCCCTGGACAT CGCGTGGTTGACCGGCATTATCCCGCTGGGCTTTGTACCCGCAGAGATCGCTATCAGCCCCGATGAAACCACGTTGTATG TCGCTCATGAAAGCGGCCGGGAAGTCAGTGTGGTCGACATCGCCAGCGCCAGCGTGACGGGGGCCATCAAGCGGGCAGGG GCGGGCGCGATTACCCTGAGTCCCGATGGCAAGAGGCTTTACACCATCGGCCAGAAAAGGTGCTACGTGGTCGATACGCG CATGCGCGAAGTGATCAGGATACTTCCGGCAGCCAACGTCAACAGGATCCTGTGCAGTGCCGATGGCCGTTTTATCTGCC TTTCCTTTCAGAACGCGCTCGGCGGGCTGATTCGCCTGATCGAGACCGAGAATTACACGGTCGAAAACGAGTTCGATCTG GGCGCCCTGACCAACGCGTCGCTGGCCCTCGGGATCAGCCCGTTGAACGACAGGTTTTACGCGACCATGCTGGTTGACCG GACCGCGCCTACCGATGTTCTTGCGATCAGCAAGGTCGATTACCTGCAACATGACATCTCCGGGTTTTCCGACCCGCGTT CGATGGCCTTCAGTTCCGATGGCGCCTGGTTGTATGTCGGCGGCATCGACGAGGTCTACATCATCGATGCCGCGACCAAT AAAACCTTCTATCGGGAAAGGATCGGCACGCAGGGCTACCCGGTGAAAGTCATCGGAGTGACGCCGGATGACCGCTATGT GTACGCGATCTATACCTGTAATTACGATGTCTACCGGATCGACACGGTGAAGGGGATCGCCACCTGCATCGCTTACTTTC CGTCAGTAGGTGGCGCGGTCCTCAACAAGACCGGCACGTATATCTACTCCACCCATCCGGACATGAGCTGGATTTCGATC TACCGGCTATAA
Upstream 100 bases:
>100_bases GGCATAAGTGTCTTGGCCGCATCGTTGGATGACGGGGATATATCTTCTTATCTATTCCCCGTTCTGGCGGTCTTACAAGA CCTATTGAAAGGTGAGAGAA
Downstream 100 bases:
>100_bases AGACTCCAGCAGTGGCCTGGCTTGCGTGGTACCAGCCGGGTCGACCGGTCAGTCGGCGTCAAGCGCTGCGACACCGGCCC TGGCGATCTGAGCATCCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MQKKASQNVRALTHIVDPVGSGVPLDIAWLTGIIPLGFVPAEIAISPDETTLYVAHESGREVSVVDIASASVTGAIKRAG AGAITLSPDGKRLYTIGQKRCYVVDTRMREVIRILPAANVNRILCSADGRFICLSFQNALGGLIRLIETENYTVENEFDL GALTNASLALGISPLNDRFYATMLVDRTAPTDVLAISKVDYLQHDISGFSDPRSMAFSSDGAWLYVGGIDEVYIIDAATN KTFYRERIGTQGYPVKVIGVTPDDRYVYAIYTCNYDVYRIDTVKGIATCIAYFPSVGGAVLNKTGTYIYSTHPDMSWISI YRL
Sequences:
>Translated_323_residues MQKKASQNVRALTHIVDPVGSGVPLDIAWLTGIIPLGFVPAEIAISPDETTLYVAHESGREVSVVDIASASVTGAIKRAG AGAITLSPDGKRLYTIGQKRCYVVDTRMREVIRILPAANVNRILCSADGRFICLSFQNALGGLIRLIETENYTVENEFDL GALTNASLALGISPLNDRFYATMLVDRTAPTDVLAISKVDYLQHDISGFSDPRSMAFSSDGAWLYVGGIDEVYIIDAATN KTFYRERIGTQGYPVKVIGVTPDDRYVYAIYTCNYDVYRIDTVKGIATCIAYFPSVGGAVLNKTGTYIYSTHPDMSWISI YRL >Mature_323_residues MQKKASQNVRALTHIVDPVGSGVPLDIAWLTGIIPLGFVPAEIAISPDETTLYVAHESGREVSVVDIASASVTGAIKRAG AGAITLSPDGKRLYTIGQKRCYVVDTRMREVIRILPAANVNRILCSADGRFICLSFQNALGGLIRLIETENYTVENEFDL GALTNASLALGISPLNDRFYATMLVDRTAPTDVLAISKVDYLQHDISGFSDPRSMAFSSDGAWLYVGGIDEVYIIDAATN KTFYRERIGTQGYPVKVIGVTPDDRYVYAIYTCNYDVYRIDTVKGIATCIAYFPSVGGAVLNKTGTYIYSTHPDMSWISI YRL
Specific function: Unknown
COG id: COG3391
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35265; Mature: 35265
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKKASQNVRALTHIVDPVGSGVPLDIAWLTGIIPLGFVPAEIAISPDETTLYVAHESGR CCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCC EVSVVDIASASVTGAIKRAGAGAITLSPDGKRLYTIGQKRCYVVDTRMREVIRILPAANV EEEEEEECCCCHHHHHHHCCCCEEEECCCCCEEEEECCCEEEEEEHHHHHHHHHCCCCCC NRILCSADGRFICLSFQNALGGLIRLIETENYTVENEFDLGALTNASLALGISPLNDRFY CEEEECCCCCEEEEEECHHHHHEEEEEECCCEEEECCCCCCEECCCEEEEEECCCCCCEE ATMLVDRTAPTDVLAISKVDYLQHDISGFSDPRSMAFSSDGAWLYVGGIDEVYIIDAATN EEEEEECCCCCCEEEEHHHHHHHHHHCCCCCCCCEEECCCCCEEEECCCCEEEEEEECCC KTFYRERIGTQGYPVKVIGVTPDDRYVYAIYTCNYDVYRIDTVKGIATCIAYFPSVGGAV CHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEECCEEEEEECHHHHHHHHHHHHCCCCEE LNKTGTYIYSTHPDMSWISIYRL ECCCCCEEEECCCCCCEEEEEEC >Mature Secondary Structure MQKKASQNVRALTHIVDPVGSGVPLDIAWLTGIIPLGFVPAEIAISPDETTLYVAHESGR CCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCC EVSVVDIASASVTGAIKRAGAGAITLSPDGKRLYTIGQKRCYVVDTRMREVIRILPAANV EEEEEEECCCCHHHHHHHCCCCEEEECCCCCEEEEECCCEEEEEEHHHHHHHHHCCCCCC NRILCSADGRFICLSFQNALGGLIRLIETENYTVENEFDLGALTNASLALGISPLNDRFY CEEEECCCCCEEEEEECHHHHHEEEEEECCCEEEECCCCCCEECCCEEEEEECCCCCCEE ATMLVDRTAPTDVLAISKVDYLQHDISGFSDPRSMAFSSDGAWLYVGGIDEVYIIDAATN EEEEEECCCCCCEEEEHHHHHHHHHHCCCCCCCCEEECCCCCEEEECCCCEEEEEEECCC KTFYRERIGTQGYPVKVIGVTPDDRYVYAIYTCNYDVYRIDTVKGIATCIAYFPSVGGAV CHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEECCEEEEEECHHHHHHHHHHHHCCCCEE LNKTGTYIYSTHPDMSWISIYRL ECCCCCEEEECCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA