Click here to switch to the map view.

The map label for this gene is atoE [H]

Identifier: 66046468

GI number: 66046468

Start: 3877262

End: 3878680

Strand: Direct

Name: atoE [H]

Synonym: Psyr_3239

Alternate gene names: 66046468

Gene position: 3877262-3878680 (Clockwise)

Preceding gene: 66046467

Following gene: 66046471

Centisome position: 63.63

GC content: 63.85

Gene sequence:

>1419_bases
ATGGCCGCCAACATAGAAGAAAGCCGCTCCGCCCGATTTGCCTTGCGCTGTGCTGCGTGGGCTGAACGCTGGTTTCCCGA
TTCATGGGTATTTGCCGCACTGGCGGTGGTCATCGTCACGCTGGCGACGCTGGCCATCGGCGCACGTCCGGTCGAGGCCG
CCAAGGCGTTCGGTGACGGGTTCTGGAGCCTGATTCCGTTCACCATGCAAATGGCCTTCGTGGTCATCGGCGGTTACGTG
GTCGCCAGCTCACCGCCTGCGGTACGCCTGATCGACCGCCTGGCCCGGGTACCGCGCAACGGCCGTTCGGCGGTGGCCTG
GGTGGCGCTGATTTCCATGCTCGCTTCGCTGCTCAACTGGGGCCTGTCGCTGGTGTTCGGCGGCCTGCTGGTGCGCGCCC
TCGCCCGCCGCACTGACCTGCGCATGGATTACCGTGCAGCCGGCGCCGCGGCCTATCTGGGCCTGGGCGCGGTCTGGGCG
CTGGGGCTGTCGTCTTCGGCCGCGCAATTGCAGGCCAACCCGGCCAGTCTGCCGCCGTCGATCCTGGCGATTACCGGGGT
GATCCCGTTCACCGAAACCATCTTTCTCTGGCAATCCGGGGTCATGCTCGCCGCGCTGGTGGTCATCTCACTGATCGTTG
CCTACGCCACCGCGCCCGGCCCGAACAGCGCCCGCGACGCCAAGGCCTGCGGTGTCGACCCGGCCTTCAACCTGCCGCCG
CTGCCGCCCCGCACACGGCCCGGGGAATGGCTGGAATACAGCCCGCTGCTGATCATCCTCATGGTGCTGCTGGGGGTTGG
CTGGCTGTTCAACGAGTTTTCGAGCAAACCGGTGATCACAGCGATTTCCGGGCTCAATACCTACAATTTCCTGTTCATCA
TGCTCGGTGCCCTGCTGCACTGGCGGCCGCGCAGTTTTCTCGATGCCGTCGCACGGGCGGTGCCCACCACCACCGGCGTG
CTGATTCAATTCCCTCTGTACGGTTCGATCGCCGCGCTACTGACCACGGTCAAGGGCGGCGATGCGCAAACCCTGGCGCA
TTACATCTCGACGTTCTTCACCAGCATTGCTTCCCACGATACTTACGCGATTCTGATGGGGGTCTATTCAGCCATATTGG
GCTTTTTCATTCCGTCAGGCGGCGGCAAGTGGATTATCGAAGCGCCCTACGTGATGCAGGTCGCCAACGACCTGCAGTAT
CACCTCGGCTGGGCAGTACAGATCTACAACGCAGCCGAAGCCCTGCCCAACCTGATAAACCCGTTCTACATGCTGCCGCT
GCTGGGTGTACTGGGCCTGAAGGCGCGTGACCTGATCGGCTTCTCGTTCGTGCAACTGCTGGTCCACACGCCGCTGGTGC
TGTTTCTGCTCTGGGCACTGGGCACCACGCTGGCCTATGTGCCGCCGGTAATGCCCTGA

Upstream 100 bases:

>100_bases
AGTTCACCAGAGTGGGAACGCCGTTCTGAATGCTCTGCGTCTGCAATAGTCGGCTGTTGAAGTCACTCCCCGATAATAAT
TACAAAAAGAGGTGCCCCTG

Downstream 100 bases:

>100_bases
ATGCCTACGCGTCGAACGCGTAATCACGCTCGACCCGGCAGATTCGCGTGGTAAACGCCTGATACCAGCGCGAACGACCC
TGATCGCGGACCTGGGCATG

Product: Short chain fatty acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 471

Protein sequence:

>472_residues
MAANIEESRSARFALRCAAWAERWFPDSWVFAALAVVIVTLATLAIGARPVEAAKAFGDGFWSLIPFTMQMAFVVIGGYV
VASSPPAVRLIDRLARVPRNGRSAVAWVALISMLASLLNWGLSLVFGGLLVRALARRTDLRMDYRAAGAAAYLGLGAVWA
LGLSSSAAQLQANPASLPPSILAITGVIPFTETIFLWQSGVMLAALVVISLIVAYATAPGPNSARDAKACGVDPAFNLPP
LPPRTRPGEWLEYSPLLIILMVLLGVGWLFNEFSSKPVITAISGLNTYNFLFIMLGALLHWRPRSFLDAVARAVPTTTGV
LIQFPLYGSIAALLTTVKGGDAQTLAHYISTFFTSIASHDTYAILMGVYSAILGFFIPSGGGKWIIEAPYVMQVANDLQY
HLGWAVQIYNAAEALPNLINPFYMLPLLGVLGLKARDLIGFSFVQLLVHTPLVLFLLWALGTTLAYVPPVMP

Sequences:

>Translated_472_residues
MAANIEESRSARFALRCAAWAERWFPDSWVFAALAVVIVTLATLAIGARPVEAAKAFGDGFWSLIPFTMQMAFVVIGGYV
VASSPPAVRLIDRLARVPRNGRSAVAWVALISMLASLLNWGLSLVFGGLLVRALARRTDLRMDYRAAGAAAYLGLGAVWA
LGLSSSAAQLQANPASLPPSILAITGVIPFTETIFLWQSGVMLAALVVISLIVAYATAPGPNSARDAKACGVDPAFNLPP
LPPRTRPGEWLEYSPLLIILMVLLGVGWLFNEFSSKPVITAISGLNTYNFLFIMLGALLHWRPRSFLDAVARAVPTTTGV
LIQFPLYGSIAALLTTVKGGDAQTLAHYISTFFTSIASHDTYAILMGVYSAILGFFIPSGGGKWIIEAPYVMQVANDLQY
HLGWAVQIYNAAEALPNLINPFYMLPLLGVLGLKARDLIGFSFVQLLVHTPLVLFLLWALGTTLAYVPPVMP
>Mature_471_residues
AANIEESRSARFALRCAAWAERWFPDSWVFAALAVVIVTLATLAIGARPVEAAKAFGDGFWSLIPFTMQMAFVVIGGYVV
ASSPPAVRLIDRLARVPRNGRSAVAWVALISMLASLLNWGLSLVFGGLLVRALARRTDLRMDYRAAGAAAYLGLGAVWAL
GLSSSAAQLQANPASLPPSILAITGVIPFTETIFLWQSGVMLAALVVISLIVAYATAPGPNSARDAKACGVDPAFNLPPL
PPRTRPGEWLEYSPLLIILMVLLGVGWLFNEFSSKPVITAISGLNTYNFLFIMLGALLHWRPRSFLDAVARAVPTTTGVL
IQFPLYGSIAALLTTVKGGDAQTLAHYISTFFTSIASHDTYAILMGVYSAILGFFIPSGGGKWIIEAPYVMQVANDLQYH
LGWAVQIYNAAEALPNLINPFYMLPLLGVLGLKARDLIGFSFVQLLVHTPLVLFLLWALGTTLAYVPPVMP

Specific function: Responsible for the intake of short-chain fatty acids [H]

COG id: COG2031

COG function: function code I; Short chain fatty acids transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788553, Length=446, Percent_Identity=32.7354260089686, Blast_Score=215, Evalue=5e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006161
- InterPro:   IPR006160 [H]

Pfam domain/function: PF02667 SCFA_trans [H]

EC number: NA

Molecular weight: Translated: 50749; Mature: 50618

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAANIEESRSARFALRCAAWAERWFPDSWVFAALAVVIVTLATLAIGARPVEAAKAFGDG
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCH
FWSLIPFTMQMAFVVIGGYVVASSPPAVRLIDRLARVPRNGRSAVAWVALISMLASLLNW
HHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
GLSLVFGGLLVRALARRTDLRMDYRAAGAAAYLGLGAVWALGLSSSAAQLQANPASLPPS
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHH
ILAITGVIPFTETIFLWQSGVMLAALVVISLIVAYATAPGPNSARDAKACGVDPAFNLPP
HHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCC
LPPRTRPGEWLEYSPLLIILMVLLGVGWLFNEFSSKPVITAISGLNTYNFLFIMLGALLH
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHH
WRPRSFLDAVARAVPTTTGVLIQFPLYGSIAALLTTVKGGDAQTLAHYISTFFTSIASHD
CCCHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
TYAILMGVYSAILGFFIPSGGGKWIIEAPYVMQVANDLQYHLGWAVQIYNAAEALPNLIN
HHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PFYMLPLLGVLGLKARDLIGFSFVQLLVHTPLVLFLLWALGTTLAYVPPVMP
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AANIEESRSARFALRCAAWAERWFPDSWVFAALAVVIVTLATLAIGARPVEAAKAFGDG
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCH
FWSLIPFTMQMAFVVIGGYVVASSPPAVRLIDRLARVPRNGRSAVAWVALISMLASLLNW
HHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
GLSLVFGGLLVRALARRTDLRMDYRAAGAAAYLGLGAVWALGLSSSAAQLQANPASLPPS
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHH
ILAITGVIPFTETIFLWQSGVMLAALVVISLIVAYATAPGPNSARDAKACGVDPAFNLPP
HHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCC
LPPRTRPGEWLEYSPLLIILMVLLGVGWLFNEFSSKPVITAISGLNTYNFLFIMLGALLH
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHH
WRPRSFLDAVARAVPTTTGVLIQFPLYGSIAALLTTVKGGDAQTLAHYISTFFTSIASHD
CCCHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
TYAILMGVYSAILGFFIPSGGGKWIIEAPYVMQVANDLQYHLGWAVQIYNAAEALPNLIN
HHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PFYMLPLLGVLGLKARDLIGFSFVQLLVHTPLVLFLLWALGTTLAYVPPVMP
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]