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The map label for this gene is glpQ [H]

Identifier: 66046471

GI number: 66046471

Start: 3881044

End: 3882186

Strand: Direct

Name: glpQ [H]

Synonym: Psyr_3242

Alternate gene names: 66046471

Gene position: 3881044-3882186 (Clockwise)

Preceding gene: 66046468

Following gene: 66046473

Centisome position: 63.69

GC content: 60.37

Gene sequence:

>1143_bases
ATGCAAGGATTTCCCACCACCCTGTTGAAAAAGACCCTATTGGCTGCGGCTGTGATGTCGGGCCTGATGCTGTCGTCAGG
CATGGCAGCGGCGGCGGACGCCCCAGGCAAGGTGCTGAGCGAGAAATACGGCCTGCCCTGGCCGGCCGTGATCGCCCATC
GCGGTGCTTCGTTCGACGCACCGGAAGAAACCACCCCGGCCTACACCCTGGCGCGGGACCTGGGCGCGGACTACCTGGAA
ATGGACATCCAGCGAACCAAGGACGGCGTGCTGATAGCGCTGCACGATGACGTGCTGGAACGCACCACCAACATTGCTCA
AGTGTTCCCGACACGGGTGAAAGACCCGGTCAGCACGTTCACTCTGGCGGAGCTCAAGCAACTGGACGCCGGTTCGTGGT
TCAACAAGGCTTACCCGGACAGGGCTCGCGACAGTTACAACGGGTTGCAGATCCTGACGCTGGATGAGGTCATCGACATC
GCCGAGGGCGGCGCCAACAAGCCGGGGCTGTACATCGAGACCAAGGTGCCGAACAAGTTTCCAGGTGTCGAAGCCGACCT
GAAAAAACTGCTGGCCAAACGCGGCTGGCTCGAACAGCGGCCTGCGGCAGCGGCCGGCCATGTCAACGTTGCGCACATGC
CAGGACGCGTGGTCCTGCAGACGTTCGAGAAGCAAAGCCTGGAACTGCTGCAGAAAGAAATGCCGAAAGTGCCCAAGGTC
ATGCTGCTGTGGATTGGCGAAGGCTCGATAGAGCCCAAATCCAGCGTCGCGTTCAAGGACTCGGGGGCCAAGGACAAGGC
CAGCTATTACGCGACCCAGGAAGTCAAATCACCGCAGGAGTTCGAGCAGTGGATTGACTGGGCCAAGGCCCACGGCGCCA
TCGGCACCGGCCCTTCGTCGCAACTGGCCAAGGGTGGCGACCAGAGCTATATGGACCTGGTCAAACCCTGGATGAACAAC
CTGACCCACGAGAAAGGCATGGTGATCCATCCGTATACGGTGGACGACGCAGAGGACTTCAAGCGGATCAGCCATGATGG
CGCGGACGGCTTCTTCACCAACCGCACCGCCGAACTGTTGAAGTTCTACGGGCGGCCAGCGAAAGAAAGCATTGAAACGA
TTCTGAAGCGCAACGGTTACTGA

Upstream 100 bases:

>100_bases
GTGCGCTATCGTTGCGTGCAGTGACGCAACCAGCGGCTCGGGCTGGCGCGCACGCTGTTCATAAAACAGGCTTTCTCAAA
AAACAAGGAAACACCCGCCC

Downstream 100 bases:

>100_bases
TTCAGCGGCTGGCCGCATCCTGCGATGCGGCCAGTCAATCAGAAGTCGACAGTGCCCGACAGCTTGAGGGTACGCGGCTC
GCCCTGAGTCAGGTAACCGC

Product: glycerophosphodiester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MQGFPTTLLKKTLLAAAVMSGLMLSSGMAAAADAPGKVLSEKYGLPWPAVIAHRGASFDAPEETTPAYTLARDLGADYLE
MDIQRTKDGVLIALHDDVLERTTNIAQVFPTRVKDPVSTFTLAELKQLDAGSWFNKAYPDRARDSYNGLQILTLDEVIDI
AEGGANKPGLYIETKVPNKFPGVEADLKKLLAKRGWLEQRPAAAAGHVNVAHMPGRVVLQTFEKQSLELLQKEMPKVPKV
MLLWIGEGSIEPKSSVAFKDSGAKDKASYYATQEVKSPQEFEQWIDWAKAHGAIGTGPSSQLAKGGDQSYMDLVKPWMNN
LTHEKGMVIHPYTVDDAEDFKRISHDGADGFFTNRTAELLKFYGRPAKESIETILKRNGY

Sequences:

>Translated_380_residues
MQGFPTTLLKKTLLAAAVMSGLMLSSGMAAAADAPGKVLSEKYGLPWPAVIAHRGASFDAPEETTPAYTLARDLGADYLE
MDIQRTKDGVLIALHDDVLERTTNIAQVFPTRVKDPVSTFTLAELKQLDAGSWFNKAYPDRARDSYNGLQILTLDEVIDI
AEGGANKPGLYIETKVPNKFPGVEADLKKLLAKRGWLEQRPAAAAGHVNVAHMPGRVVLQTFEKQSLELLQKEMPKVPKV
MLLWIGEGSIEPKSSVAFKDSGAKDKASYYATQEVKSPQEFEQWIDWAKAHGAIGTGPSSQLAKGGDQSYMDLVKPWMNN
LTHEKGMVIHPYTVDDAEDFKRISHDGADGFFTNRTAELLKFYGRPAKESIETILKRNGY
>Mature_380_residues
MQGFPTTLLKKTLLAAAVMSGLMLSSGMAAAADAPGKVLSEKYGLPWPAVIAHRGASFDAPEETTPAYTLARDLGADYLE
MDIQRTKDGVLIALHDDVLERTTNIAQVFPTRVKDPVSTFTLAELKQLDAGSWFNKAYPDRARDSYNGLQILTLDEVIDI
AEGGANKPGLYIETKVPNKFPGVEADLKKLLAKRGWLEQRPAAAAGHVNVAHMPGRVVLQTFEKQSLELLQKEMPKVPKV
MLLWIGEGSIEPKSSVAFKDSGAKDKASYYATQEVKSPQEFEQWIDWAKAHGAIGTGPSSQLAKGGDQSYMDLVKPWMNN
LTHEKGMVIHPYTVDDAEDFKRISHDGADGFFTNRTAELLKFYGRPAKESIETILKRNGY

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Homo sapiens, GI284055242, Length=94, Percent_Identity=44.6808510638298, Blast_Score=86, Evalue=7e-17,
Organism=Homo sapiens, GI21361649, Length=94, Percent_Identity=44.6808510638298, Blast_Score=85, Evalue=9e-17,
Organism=Homo sapiens, GI284055245, Length=94, Percent_Identity=44.6808510638298, Blast_Score=85, Evalue=9e-17,
Organism=Homo sapiens, GI284055240, Length=94, Percent_Identity=44.6808510638298, Blast_Score=85, Evalue=9e-17,
Organism=Homo sapiens, GI189571657, Length=130, Percent_Identity=35.3846153846154, Blast_Score=76, Evalue=4e-14,
Organism=Escherichia coli, GI1788572, Length=401, Percent_Identity=26.4339152119701, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1789858, Length=201, Percent_Identity=28.3582089552239, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 41782; Mature: 41782

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGFPTTLLKKTLLAAAVMSGLMLSSGMAAAADAPGKVLSEKYGLPWPAVIAHRGASFDA
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHCCCCCCCC
PEETTPAYTLARDLGADYLEMDIQRTKDGVLIALHDDVLERTTNIAQVFPTRVKDPVSTF
CCCCCCHHHHHHHHCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHCCHHHHH
TLAELKQLDAGSWFNKAYPDRARDSYNGLQILTLDEVIDIAEGGANKPGLYIETKVPNKF
HHHHHHHHCCCCCHHHCCCCHHCCCCCCEEEEEHHHHHHHHCCCCCCCCEEEEECCCCCC
PGVEADLKKLLAKRGWLEQRPAAAAGHVNVAHMPGRVVLQTFEKQSLELLQKEMPKVPKV
CCCHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEE
MLLWIGEGSIEPKSSVAFKDSGAKDKASYYATQEVKSPQEFEQWIDWAKAHGAIGTGPSS
EEEEECCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCH
QLAKGGDQSYMDLVKPWMNNLTHEKGMVIHPYTVDDAEDFKRISHDGADGFFTNRTAELL
HHHCCCCHHHHHHHHHHHHHCCCCCCEEEECEECCCHHHHHHHHCCCCCCCHHHHHHHHH
KFYGRPAKESIETILKRNGY
HHHCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MQGFPTTLLKKTLLAAAVMSGLMLSSGMAAAADAPGKVLSEKYGLPWPAVIAHRGASFDA
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHCCCCCCCC
PEETTPAYTLARDLGADYLEMDIQRTKDGVLIALHDDVLERTTNIAQVFPTRVKDPVSTF
CCCCCCHHHHHHHHCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHCCHHHHH
TLAELKQLDAGSWFNKAYPDRARDSYNGLQILTLDEVIDIAEGGANKPGLYIETKVPNKF
HHHHHHHHCCCCCHHHCCCCHHCCCCCCEEEEEHHHHHHHHCCCCCCCCEEEEECCCCCC
PGVEADLKKLLAKRGWLEQRPAAAAGHVNVAHMPGRVVLQTFEKQSLELLQKEMPKVPKV
CCCHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEE
MLLWIGEGSIEPKSSVAFKDSGAKDKASYYATQEVKSPQEFEQWIDWAKAHGAIGTGPSS
EEEEECCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCH
QLAKGGDQSYMDLVKPWMNNLTHEKGMVIHPYTVDDAEDFKRISHDGADGFFTNRTAELL
HHHCCCCHHHHHHHHHHHHHCCCCCCEEEECEECCCHHHHHHHHCCCCCCCHHHHHHHHH
KFYGRPAKESIETILKRNGY
HHHCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8012593; 9384377 [H]