| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046202
Identifier: 66046202
GI number: 66046202
Start: 3563947
End: 3564309
Strand: Direct
Name: 66046202
Synonym: Psyr_2971
Alternate gene names: NA
Gene position: 3563947-3564309 (Clockwise)
Preceding gene: 66046201
Following gene: 66046204
Centisome position: 58.49
GC content: 57.02
Gene sequence:
>363_bases TTGTCCAGACTTGCCGAGTTTCGAGCAGCAGAGAAAGCCCTTCAGGAACAGCTTGCACAGCTGGAATCGTTGAAGAATGA CGCCGGATTGAAGAAGGAGATCGAATTCGAGCAAAAGCTCCAGGACCTGATGGGCACCTACGGCAAAAGCCTGCGTGACA TCATCGCAATCCTTGACCCTTCGAGTGCCACCTCGCTGGTTGCACCCGCAGGGCCCAAGCGTCGCCGTGCACGCGTGGTC AAGGTGTACCAGAACCCGCACACCGGCGAGCTGATTGAAACCAAGGGCGGCAACCATCGCGGCCTCAAGGCGTGGAAAGA GCAATACGGTGTAGACACTGTTGATTCATGGCTGCGTGCCTGA
Upstream 100 bases:
>100_bases GCAGGTATCGGGCACCCTCGAGTGAGCGAATCGACCCATCAGTTTTGTCTCATCGCTTTATAGGGCTGACAACAGCCATT ACATTGTTGGAGTATATTAA
Downstream 100 bases:
>100_bases TTGCAAGTTGTCACTTGAAGCCCTGCACGTGCAGGGCTTTTTTATCTCCGGCACTGCAGATGAACACCTGCGCATTGCAG CGCTGCGCTCAGGCGTCATC
Product: transcriptional regulator, putative
Products: NA
Alternate protein names: Transcriptional Regulator; H-NS Family Protein MvaT; Regulatory Protein
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MSRLAEFRAAEKALQEQLAQLESLKNDAGLKKEIEFEQKLQDLMGTYGKSLRDIIAILDPSSATSLVAPAGPKRRRARVV KVYQNPHTGELIETKGGNHRGLKAWKEQYGVDTVDSWLRA
Sequences:
>Translated_120_residues MSRLAEFRAAEKALQEQLAQLESLKNDAGLKKEIEFEQKLQDLMGTYGKSLRDIIAILDPSSATSLVAPAGPKRRRARVV KVYQNPHTGELIETKGGNHRGLKAWKEQYGVDTVDSWLRA >Mature_119_residues SRLAEFRAAEKALQEQLAQLESLKNDAGLKKEIEFEQKLQDLMGTYGKSLRDIIAILDPSSATSLVAPAGPKRRRARVVK VYQNPHTGELIETKGGNHRGLKAWKEQYGVDTVDSWLRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13434; Mature: 13302
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLAEFRAAEKALQEQLAQLESLKNDAGLKKEIEFEQKLQDLMGTYGKSLRDIIAILDP CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SSATSLVAPAGPKRRRARVVKVYQNPHTGELIETKGGNHRGLKAWKEQYGVDTVDSWLRA CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHCCCHHHHHHCC >Mature Secondary Structure SRLAEFRAAEKALQEQLAQLESLKNDAGLKKEIEFEQKLQDLMGTYGKSLRDIIAILDP CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SSATSLVAPAGPKRRRARVVKVYQNPHTGELIETKGGNHRGLKAWKEQYGVDTVDSWLRA CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA