Click here to switch to the map view.

The map label for this gene is 66046201

Identifier: 66046201

GI number: 66046201

Start: 3562366

End: 3563460

Strand: Direct

Name: 66046201

Synonym: Psyr_2970

Alternate gene names: NA

Gene position: 3562366-3563460 (Clockwise)

Preceding gene: 66046200

Following gene: 66046202

Centisome position: 58.46

GC content: 63.38

Gene sequence:

>1095_bases
ATGCCCAGACTTTCTACCACGGGGTTATCGCCTCAACCCACTTCTCGACGTCGCTGGCTGATCGGCGCAGCGGCTGCAGC
GCTGCTGGTGCTTTCGCTGGTTTTCTGGTGGTGGCGCATGCCCGTCCAGACGGCCCCGGCCAAGCTCAGTCATACCTATG
CCCAGGCGCTGGAGCAGGCACATGACGGCAAACCCGGTGCCGCGCGCGTGCTGTACCAACAACTGGCGCGGACTGACCTG
TCTGACGCACAACGCATCAGCCTGCTCGCCGAACTGAGCGACTACCCCAGCCCCCAGGCCCTCAAGTTGCTCGATGCGGC
CTTGAGTAACCCGTCCGCTCAAGTGCGCGAGGCGGCCATCGATGTCAGCGTCAGGCTGGTCTCCAACAGCCAGCGCAGTC
TGTTGCTCGGACCGCTGCTGGATGACGCCGAACAATCCGTCAGGTTTCGCGCCACCGGCGCCCTGCTTGGCCTCTCCCCC
GATGAGCTGGGCCTGTACTTTGCCGTTCTGCAGCAAAGTGCCGAGGCGTTTCAGGAATCACTCAAGAGCCAGCCGCAAAA
CGCCCAAAACCAGTTGCAACTGGCCAGGCTGTATCTGCAGACCGGCGACCTGGAACCCGCGCTCGCGGCACTACAGCGGG
CCACCGCGCTGGACCCGGGCAATATCGAAGCAGCGCTGGCGCACATCGAATTACTGGACCGCAAGGGCCAGGCCGAGCAG
GCGCGCGGCCTTTTCGCACAGTTGCTGGAGCACAATCCTGGCTCGTCCCTGCTCCAGCATGCGCTGGGCATGTGGCTGCT
GAACCACGGCCAGGCCGAATTCGCCGTGCTCAGCCTGGCCAAGGCCACGGAACTGGCACCCGACAACAACGACTATCGCT
ATGACCTGGCGGTGGCCCTGCACTCGTTGAACGAGCTCGAAGCGGCACAGCGCCAGTTGACCCAGATCGTTCAGAACCAG
CCCGCCAATCGCAAGGCCAGGGTGCTGCTGATCCAGTACTGGAAAGAGAACGGCCAGTTGCAAAACGTGCAGATTCTGCT
GGCCGAGCTCGAGCAGCAGAACCCGGATGACCCTGTGCTGCAACAGGGACTGTAG

Upstream 100 bases:

>100_bases
CGGGGCTTTTTTTGCCTGAAATCCGGCTGCATCATGATTGCCGTTTGACAGCTGCCAGCCACTCCCCGAAGCTGCAACCC
GTCAAGCATTGGAAATCGAT

Downstream 100 bases:

>100_bases
GGTCACAAACGCAACGCTGAGACGGGCGAAAGGCCATCTTTGAAGGGTCTACGCGCCTTTCAGCACGTGGCCTTCAGACA
TTCCGGCCATTTCCTCACTC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; TPR Domain Protein; Doubled CXXCH Domain Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MPRLSTTGLSPQPTSRRRWLIGAAAAALLVLSLVFWWWRMPVQTAPAKLSHTYAQALEQAHDGKPGAARVLYQQLARTDL
SDAQRISLLAELSDYPSPQALKLLDAALSNPSAQVREAAIDVSVRLVSNSQRSLLLGPLLDDAEQSVRFRATGALLGLSP
DELGLYFAVLQQSAEAFQESLKSQPQNAQNQLQLARLYLQTGDLEPALAALQRATALDPGNIEAALAHIELLDRKGQAEQ
ARGLFAQLLEHNPGSSLLQHALGMWLLNHGQAEFAVLSLAKATELAPDNNDYRYDLAVALHSLNELEAAQRQLTQIVQNQ
PANRKARVLLIQYWKENGQLQNVQILLAELEQQNPDDPVLQQGL

Sequences:

>Translated_364_residues
MPRLSTTGLSPQPTSRRRWLIGAAAAALLVLSLVFWWWRMPVQTAPAKLSHTYAQALEQAHDGKPGAARVLYQQLARTDL
SDAQRISLLAELSDYPSPQALKLLDAALSNPSAQVREAAIDVSVRLVSNSQRSLLLGPLLDDAEQSVRFRATGALLGLSP
DELGLYFAVLQQSAEAFQESLKSQPQNAQNQLQLARLYLQTGDLEPALAALQRATALDPGNIEAALAHIELLDRKGQAEQ
ARGLFAQLLEHNPGSSLLQHALGMWLLNHGQAEFAVLSLAKATELAPDNNDYRYDLAVALHSLNELEAAQRQLTQIVQNQ
PANRKARVLLIQYWKENGQLQNVQILLAELEQQNPDDPVLQQGL
>Mature_363_residues
PRLSTTGLSPQPTSRRRWLIGAAAAALLVLSLVFWWWRMPVQTAPAKLSHTYAQALEQAHDGKPGAARVLYQQLARTDLS
DAQRISLLAELSDYPSPQALKLLDAALSNPSAQVREAAIDVSVRLVSNSQRSLLLGPLLDDAEQSVRFRATGALLGLSPD
ELGLYFAVLQQSAEAFQESLKSQPQNAQNQLQLARLYLQTGDLEPALAALQRATALDPGNIEAALAHIELLDRKGQAEQA
RGLFAQLLEHNPGSSLLQHALGMWLLNHGQAEFAVLSLAKATELAPDNNDYRYDLAVALHSLNELEAAQRQLTQIVQNQP
ANRKARVLLIQYWKENGQLQNVQILLAELEQQNPDDPVLQQGL

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39959; Mature: 39828

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRLSTTGLSPQPTSRRRWLIGAAAAALLVLSLVFWWWRMPVQTAPAKLSHTYAQALEQA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHH
HDGKPGAARVLYQQLARTDLSDAQRISLLAELSDYPSPQALKLLDAALSNPSAQVREAAI
HCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHH
DVSVRLVSNSQRSLLLGPLLDDAEQSVRFRATGALLGLSPDELGLYFAVLQQSAEAFQES
HHEEEEECCCCCCEEECHHHHHHHHHHHHEECCEEECCCHHHHHHHHHHHHHHHHHHHHH
LKSQPQNAQNQLQLARLYLQTGDLEPALAALQRATALDPGNIEAALAHIELLDRKGQAEQ
HHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHH
ARGLFAQLLEHNPGSSLLQHALGMWLLNHGQAEFAVLSLAKATELAPDNNDYRYDLAVAL
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEHHHHHH
HSLNELEAAQRQLTQIVQNQPANRKARVLLIQYWKENGQLQNVQILLAELEQQNPDDPVL
HHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHH
QQGL
HCCC
>Mature Secondary Structure 
PRLSTTGLSPQPTSRRRWLIGAAAAALLVLSLVFWWWRMPVQTAPAKLSHTYAQALEQA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHH
HDGKPGAARVLYQQLARTDLSDAQRISLLAELSDYPSPQALKLLDAALSNPSAQVREAAI
HCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHH
DVSVRLVSNSQRSLLLGPLLDDAEQSVRFRATGALLGLSPDELGLYFAVLQQSAEAFQES
HHEEEEECCCCCCEEECHHHHHHHHHHHHEECCEEECCCHHHHHHHHHHHHHHHHHHHHH
LKSQPQNAQNQLQLARLYLQTGDLEPALAALQRATALDPGNIEAALAHIELLDRKGQAEQ
HHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHH
ARGLFAQLLEHNPGSSLLQHALGMWLLNHGQAEFAVLSLAKATELAPDNNDYRYDLAVAL
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEHHHHHH
HSLNELEAAQRQLTQIVQNQPANRKARVLLIQYWKENGQLQNVQILLAELEQQNPDDPVL
HHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHH
QQGL
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA