Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

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The map label for this gene is yegV [H]

Identifier: 66046154

GI number: 66046154

Start: 3511915

End: 3512841

Strand: Direct

Name: yegV [H]

Synonym: Psyr_2923

Alternate gene names: 66046154

Gene position: 3511915-3512841 (Clockwise)

Preceding gene: 66046153

Following gene: 66046158

Centisome position: 57.63

GC content: 64.62

Gene sequence:

>927_bases
ATGCCCGCTAAATTGTTCTACACCGGCCAAGTCGTGGTTGACTTGGTGATGGCCATCGACCGCCTGCCGCCGTCGGGCGG
AGACGTGTTGGCTACCAGCGCTACGTTCGAGGCCGGAGGCGGTTTCAATGTCATGGCCGCTGCGTGCCGCAATGGCTTGC
GCACCGTTTACCTGGGTCGCCATGGCCAGGGCCGCTTCGGCGACATTGCTCGCCAGGCCATGCGCGACGAAGGTGTGGAA
ATTTCTACGATGCCCGTTTCCGGTGAGGACACCGGCCTGGCCGTTGCCCTGGTGGAAGCCTCGGCCGAGCGCTCGTTCAT
CTCCTATGTGGGCGCTGAAGGTGGCTTGTCTGCCGAGGATCTGCATGGCGTGCAGGTCAGCGCCGAAGATTATGTATTTG
TCAGCGGCTACAGCCTGGCCCACAAAAACAAGGTTACAGCCCTGCTCGCCTGGCTGGGCGGATTGCCCAGCGGCACTGCC
GTGGTATTCGACCCAGGCCCATTGGTTGATGCGCTTTATGGCGTCGAGATGCGCGCCGTACTTCCCCTGATCAGCTTATG
GTCCAGCAACCGCGAAGAAGCCCTGCGCTTCACGCAAACCCAGACGCCCGCCGACGCGCTCCACAGCCTGGCTTCCACTC
TGCGCGAAGATGCGCTCATAGTGATGCGTGACGGCCCCGCAGGCTGCTGGATCCACCATGCTGGACAGACGCGGCTCATA
CCCGGCTTTGCCGTCACGGCACTCGACACCAATGGAGCCGGCGACGCTCATGCCGGTGTGCTGCTGGCCGAGTTGGCCAG
GGGCAGCAGCGTCGACCGGGCGGCGCTGCGCGCCAATGCGGCAGCAGCGATTGCGGTCACCCGCCGGGGGCCGGCGACGG
CGCCTGGCCGTGAGGAGATAGATGCGCTGGTGGGGGCCGATGTCTAA

Upstream 100 bases:

>100_bases
AACGGCCTGGGCTGGATCGTGACCTTCATTGTCGCCGGTGGCCTGTATGCGCTGCTCGGCGGGGCGCGTGATCGCCGTGT
CGTTACCGAAGAGGCTGCCC

Downstream 100 bases:

>100_bases
TCTGGCTTGAGCCGCGCTACACCGTGATGAAGGTAATGACAGGGCAACTTTGCGGATGCTCAAAGTCTTGCACACGGCCC
TGAGCGCTCGAAGCATACGG

Product: carbohydrate kinase, PfkB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MPAKLFYTGQVVVDLVMAIDRLPPSGGDVLATSATFEAGGGFNVMAAACRNGLRTVYLGRHGQGRFGDIARQAMRDEGVE
ISTMPVSGEDTGLAVALVEASAERSFISYVGAEGGLSAEDLHGVQVSAEDYVFVSGYSLAHKNKVTALLAWLGGLPSGTA
VVFDPGPLVDALYGVEMRAVLPLISLWSSNREEALRFTQTQTPADALHSLASTLREDALIVMRDGPAGCWIHHAGQTRLI
PGFAVTALDTNGAGDAHAGVLLAELARGSSVDRAALRANAAAAIAVTRRGPATAPGREEIDALVGADV

Sequences:

>Translated_308_residues
MPAKLFYTGQVVVDLVMAIDRLPPSGGDVLATSATFEAGGGFNVMAAACRNGLRTVYLGRHGQGRFGDIARQAMRDEGVE
ISTMPVSGEDTGLAVALVEASAERSFISYVGAEGGLSAEDLHGVQVSAEDYVFVSGYSLAHKNKVTALLAWLGGLPSGTA
VVFDPGPLVDALYGVEMRAVLPLISLWSSNREEALRFTQTQTPADALHSLASTLREDALIVMRDGPAGCWIHHAGQTRLI
PGFAVTALDTNGAGDAHAGVLLAELARGSSVDRAALRANAAAAIAVTRRGPATAPGREEIDALVGADV
>Mature_307_residues
PAKLFYTGQVVVDLVMAIDRLPPSGGDVLATSATFEAGGGFNVMAAACRNGLRTVYLGRHGQGRFGDIARQAMRDEGVEI
STMPVSGEDTGLAVALVEASAERSFISYVGAEGGLSAEDLHGVQVSAEDYVFVSGYSLAHKNKVTALLAWLGGLPSGTAV
VFDPGPLVDALYGVEMRAVLPLISLWSSNREEALRFTQTQTPADALHSLASTLREDALIVMRDGPAGCWIHHAGQTRLIP
GFAVTALDTNGAGDAHAGVLLAELARGSSVDRAALRANAAAAIAVTRRGPATAPGREEIDALVGADV

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI1788417, Length=301, Percent_Identity=30.5647840531561, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI1790193, Length=322, Percent_Identity=27.9503105590062, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR002139 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: NA

Molecular weight: Translated: 31935; Mature: 31804

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAKLFYTGQVVVDLVMAIDRLPPSGGDVLATSATFEAGGGFNVMAAACRNGLRTVYLGR
CCCEEEECHHHHHHHHHHHHCCCCCCCCEEEEECEEECCCCHHHHHHHHHCCCEEEEEEC
HGQGRFGDIARQAMRDEGVEISTMPVSGEDTGLAVALVEASAERSFISYVGAEGGLSAED
CCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCHHH
LHGVQVSAEDYVFVSGYSLAHKNKVTALLAWLGGLPSGTAVVFDPGPLVDALYGVEMRAV
CCCEEECCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHCCHHHHH
LPLISLWSSNREEALRFTQTQTPADALHSLASTLREDALIVMRDGPAGCWIHHAGQTRLI
HHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCCCEEEEECCCCEEE
PGFAVTALDTNGAGDAHAGVLLAELARGSSVDRAALRANAAAAIAVTRRGPATAPGREEI
CCEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEEECCCCCCCCCHHHH
DALVGADV
HHHHCCCC
>Mature Secondary Structure 
PAKLFYTGQVVVDLVMAIDRLPPSGGDVLATSATFEAGGGFNVMAAACRNGLRTVYLGR
CCEEEECHHHHHHHHHHHHCCCCCCCCEEEEECEEECCCCHHHHHHHHHCCCEEEEEEC
HGQGRFGDIARQAMRDEGVEISTMPVSGEDTGLAVALVEASAERSFISYVGAEGGLSAED
CCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCHHH
LHGVQVSAEDYVFVSGYSLAHKNKVTALLAWLGGLPSGTAVVFDPGPLVDALYGVEMRAV
CCCEEECCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHCCHHHHH
LPLISLWSSNREEALRFTQTQTPADALHSLASTLREDALIVMRDGPAGCWIHHAGQTRLI
HHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCCCEEEEECCCCEEE
PGFAVTALDTNGAGDAHAGVLLAELARGSSVDRAALRANAAAAIAVTRRGPATAPGREEI
CCEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEEECCCCCCCCCHHHH
DALVGADV
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]