| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is fliY [H]
Identifier: 66046120
GI number: 66046120
Start: 3466248
End: 3467177
Strand: Reverse
Name: fliY [H]
Synonym: Psyr_2889
Alternate gene names: 66046120
Gene position: 3467177-3466248 (Counterclockwise)
Preceding gene: 66046121
Following gene: 66046119
Centisome position: 56.9
GC content: 60.43
Gene sequence:
>930_bases ATGTTCATCAATAGCGCCCGTGTGGCCTTGCTGACGCTAGCTGTCAGCGTCGCCCACAATACGTTGGCGTCGACCGCGCA ACCGGTCGATCTGAGTCCCGACCGGCCACGCATTCATGTGCCGCGTAACGAGGCGGCCATCGCACAGATCCCGGCGGGCT TCAAGTTCGCCCAGCCTGGCAAGTTCACCGTGGCCGTCTCCGGTGTTGCGGGGCCACCGTTGGCGCTGCTGGCCAACGAC GACAAAACCACTATCGGCAGCGAGGCCGATACCGCGCAACTGGTAGCGGATAGCCTGGGCTTGCAATTGAACGTGGTGCA GACCAGTTGGGAGGACTGGCCGCTGGGCGTCAGTTCGGGAAAATACGACGCGGTGATCAGCAATGTCACAGTCACTGAAG CACGCAAGAAACGCTTCGATTTCGCCACTTACCGTCAGGACGTCCTGGGCTTCTACGTGAAAGCCAACAGCAAAATCAGC GAGATAAAACAGGCGTCGGACATTGCCGGGCTGAAAATTATCGTCGGCTCCGGCACCAATCAGGAAAAGGTTCTGCTGGC GTGGAACGAAGCGAATGAAAAGGCCGGTATCAAGCCTGCGCTGTTGCAGTACTTCGATGATCAGGCGGCCGCACAACTTG CCATTCAGTCGGGTCGCAGTGATGCGCTGTTCGGGCCCAATTCGATATATGCCTATTCGGCCGCGATTACTGGCGGCATC AAGCGGGTAGGCACGGTTAATGGCGGCTGGCCGCTGCAGGCGGATATCGCCGTGACCACGCGCAAGGACAACGGCCTGGT CAGGCCGATTCACACCGCCCTGGAAGGAGCGATTGCCGGCGGCCAGTACGAGCAGGTGCTCAAACGCTGGGGGCTGGATG TGGAGCGCGTCGACAGGTCGTTGATCAACCCGCCCGGCTTGCCGGACTGA
Upstream 100 bases:
>100_bases GGGCCGCCGGAACAAGTGTTCCACCAACCTCGACATCCTCGCACGGCTGCCTTTCTCGGCAAGGTGCTATGACTTTCCCG CTATCAAGGAGTGACCACTG
Downstream 100 bases:
>100_bases AGCGTTGAAGGGAGCAAACGATATGGGACTGACACGACGTGAAGCGCTTTCCAGTATCGCTGCCGTGGGCGGCGAGACCG CCGTCAAGGATGCGCTTGCG
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: CBP; Protein fliY; Sulfate starvation-induced protein 7; SSI7 [H]
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MFINSARVALLTLAVSVAHNTLASTAQPVDLSPDRPRIHVPRNEAAIAQIPAGFKFAQPGKFTVAVSGVAGPPLALLAND DKTTIGSEADTAQLVADSLGLQLNVVQTSWEDWPLGVSSGKYDAVISNVTVTEARKKRFDFATYRQDVLGFYVKANSKIS EIKQASDIAGLKIIVGSGTNQEKVLLAWNEANEKAGIKPALLQYFDDQAAAQLAIQSGRSDALFGPNSIYAYSAAITGGI KRVGTVNGGWPLQADIAVTTRKDNGLVRPIHTALEGAIAGGQYEQVLKRWGLDVERVDRSLINPPGLPD
Sequences:
>Translated_309_residues MFINSARVALLTLAVSVAHNTLASTAQPVDLSPDRPRIHVPRNEAAIAQIPAGFKFAQPGKFTVAVSGVAGPPLALLAND DKTTIGSEADTAQLVADSLGLQLNVVQTSWEDWPLGVSSGKYDAVISNVTVTEARKKRFDFATYRQDVLGFYVKANSKIS EIKQASDIAGLKIIVGSGTNQEKVLLAWNEANEKAGIKPALLQYFDDQAAAQLAIQSGRSDALFGPNSIYAYSAAITGGI KRVGTVNGGWPLQADIAVTTRKDNGLVRPIHTALEGAIAGGQYEQVLKRWGLDVERVDRSLINPPGLPD >Mature_309_residues MFINSARVALLTLAVSVAHNTLASTAQPVDLSPDRPRIHVPRNEAAIAQIPAGFKFAQPGKFTVAVSGVAGPPLALLAND DKTTIGSEADTAQLVADSLGLQLNVVQTSWEDWPLGVSSGKYDAVISNVTVTEARKKRFDFATYRQDVLGFYVKANSKIS EIKQASDIAGLKIIVGSGTNQEKVLLAWNEANEKAGIKPALLQYFDDQAAAQLAIQSGRSDALFGPNSIYAYSAAITGGI KRVGTVNGGWPLQADIAVTTRKDNGLVRPIHTALEGAIAGGQYEQVLKRWGLDVERVDRSLINPPGLPD
Specific function: Part of a binding-protein-dependent transport system for cystine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788228, Length=171, Percent_Identity=30.9941520467836, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 32872; Mature: 32872
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFINSARVALLTLAVSVAHNTLASTAQPVDLSPDRPRIHVPRNEAAIAQIPAGFKFAQPG CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCEEEECCCCCEECCCC KFTVAVSGVAGPPLALLANDDKTTIGSEADTAQLVADSLGLQLNVVQTSWEDWPLGVSSG EEEEEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCC KYDAVISNVTVTEARKKRFDFATYRQDVLGFYVKANSKISEIKQASDIAGLKIIVGSGTN CCEEEEECEEHHHHHHHHCCHHHHHHHHHEEEEECCCHHHHHHHHHCCCCEEEEEECCCC QEKVLLAWNEANEKAGIKPALLQYFDDQAAAQLAIQSGRSDALFGPNSIYAYSAAITGGI CCEEEEEECCCCCCCCCCHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHCCH KRVGTVNGGWPLQADIAVTTRKDNGLVRPIHTALEGAIAGGQYEQVLKRWGLDVERVDRS HEEEECCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH LINPPGLPD HCCCCCCCC >Mature Secondary Structure MFINSARVALLTLAVSVAHNTLASTAQPVDLSPDRPRIHVPRNEAAIAQIPAGFKFAQPG CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCEEEECCCCCEECCCC KFTVAVSGVAGPPLALLANDDKTTIGSEADTAQLVADSLGLQLNVVQTSWEDWPLGVSSG EEEEEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCC KYDAVISNVTVTEARKKRFDFATYRQDVLGFYVKANSKISEIKQASDIAGLKIIVGSGTN CCEEEEECEEHHHHHHHHCCHHHHHHHHHEEEEECCCHHHHHHHHHCCCCEEEEEECCCC QEKVLLAWNEANEKAGIKPALLQYFDDQAAAQLAIQSGRSDALFGPNSIYAYSAAITGGI CCEEEEEECCCCCCCCCCHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHCCH KRVGTVNGGWPLQADIAVTTRKDNGLVRPIHTALEGAIAGGQYEQVLKRWGLDVERVDRS HEEEECCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH LINPPGLPD HCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]