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The map label for this gene is tdcF [C]

Identifier: 66046118

GI number: 66046118

Start: 3464138

End: 3464572

Strand: Reverse

Name: tdcF [C]

Synonym: Psyr_2887

Alternate gene names: 66046118

Gene position: 3464572-3464138 (Counterclockwise)

Preceding gene: 66046119

Following gene: 66046113

Centisome position: 56.86

GC content: 60.69

Gene sequence:

>435_bases
ATGAGCGACAGCATTCAACGCACCAGCGTCGGCGATTTTCCGATCTCGCAAACCGTGACAGTGCCAGCCTCGACCAGCCT
GGTATTCGTCAGCGGCACCTTGCCTGACCTTGCCGACCCGCAGGCTCCGGCGGGTACGCCGGCAGCCTATGGCAACACCG
AAGTACAGACCGTTTCGGTATTCAACAAACTGCGCAGAATCCTTCAGCAACAGGACCTCGATCTGGGCGATATCGTACAG
TTGCGGGTATTTCTGGTCGGTGCCGAGGAAACCGCCGGCAAGCTGGATTTTGCCGGGCTGCAGGCCGGTTACACGCAATT
TTTCGGCACGCCGGAACAACCTCTCAAACCCGCGCGCACGGCGTTGCAGGTGGTGGCGCTGCCATTGCCTGGCGCGTTGA
TCGAGGTCGAAGCGATAGCGGCCACACCGGCTTGA

Upstream 100 bases:

>100_bases
GCGGCAGATTTCGACCCTTGCCGCGTCATGACGTGCAACTGCACGACCCCGTCGTTTTACGTAACCCTTATTCCTGAATA
TCCATTGAAGGAGAGACACC

Downstream 100 bases:

>100_bases
TCGCGCGCTGTCAGCTTGCGTGTCGGGCAGCGATCAGCGCCGCCCGGCGCGGGTACTCACGTCCACCCATACCGCCAGCA
CCAGAATGCCGCCCTTGACG

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: TdcF Protein; Translation Initiation Inhibitor; Endoribonuclease; Endonuclease L-PSP Endoribonuclease; Endoribonuclease L-PSP Family Protein; Endoribonuclease L-PSP Superfamily

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MSDSIQRTSVGDFPISQTVTVPASTSLVFVSGTLPDLADPQAPAGTPAAYGNTEVQTVSVFNKLRRILQQQDLDLGDIVQ
LRVFLVGAEETAGKLDFAGLQAGYTQFFGTPEQPLKPARTALQVVALPLPGALIEVEAIAATPA

Sequences:

>Translated_144_residues
MSDSIQRTSVGDFPISQTVTVPASTSLVFVSGTLPDLADPQAPAGTPAAYGNTEVQTVSVFNKLRRILQQQDLDLGDIVQ
LRVFLVGAEETAGKLDFAGLQAGYTQFFGTPEQPLKPARTALQVVALPLPGALIEVEAIAATPA
>Mature_143_residues
SDSIQRTSVGDFPISQTVTVPASTSLVFVSGTLPDLADPQAPAGTPAAYGNTEVQTVSVFNKLRRILQQQDLDLGDIVQL
RVFLVGAEETAGKLDFAGLQAGYTQFFGTPEQPLKPARTALQVVALPLPGALIEVEAIAATPA

Specific function: Anaerobic degradation of L-threonine to propionate. [C]

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15093; Mature: 14962

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSIQRTSVGDFPISQTVTVPASTSLVFVSGTLPDLADPQAPAGTPAAYGNTEVQTVSV
CCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHH
FNKLRRILQQQDLDLGDIVQLRVFLVGAEETAGKLDFAGLQAGYTQFFGTPEQPLKPART
HHHHHHHHHHCCCCHHHHEEEEEEEEECCCCCCCCCCCHHHCCHHHHCCCCCCCCHHHHH
ALQVVALPLPGALIEVEAIAATPA
HHEEEEECCCCCEEEEEEEECCCC
>Mature Secondary Structure 
SDSIQRTSVGDFPISQTVTVPASTSLVFVSGTLPDLADPQAPAGTPAAYGNTEVQTVSV
CCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHH
FNKLRRILQQQDLDLGDIVQLRVFLVGAEETAGKLDFAGLQAGYTQFFGTPEQPLKPART
HHHHHHHHHHCCCCHHHHEEEEEEEEECCCCCCCCCCCHHHCCHHHHCCCCCCCCHHHHH
ALQVVALPLPGALIEVEAIAATPA
HHEEEEECCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA