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The map label for this gene is 66045934

Identifier: 66045934

GI number: 66045934

Start: 3275756

End: 3278167

Strand: Direct

Name: 66045934

Synonym: Psyr_2698

Alternate gene names: NA

Gene position: 3275756-3278167 (Clockwise)

Preceding gene: 66045932

Following gene: 66045940

Centisome position: 53.76

GC content: 51.12

Gene sequence:

>2412_bases
ATGAAAACAATGCCGGCTTTCACGTACGTGTTTTTCCTGGGTTTTTTCCATTCAAACGCCTTTTCTACGGAGATGAATCC
TTATGAGCAGATCATCAGCATTGCGCAAGGTGAGCAGGTCTGTTTAACCCTCGACAGTGATTTAAGTTCTGTCTCACTGC
AGAAGTGTGTCAACACCGATTATCAACAATGGATCTTTGTGTCATCAGGGTCCATGCTGTACCTAAAAAACAAGGCGTTA
GGCGGATCAACGCAGGCCATGTGTTTGTCAGCGTCGAATCCACGTCACGTCAGCATGAAAACCTGTGCCAGCGCCGACAG
CAACGACTATCAATCCTTGCGACTCTGGAGCAGAGACGGTGACCACACCAGCGTGTTATCAAATAAATACATCAAGGATT
TAGGCTTTGATAACTACCTGCTCAGTGATGGAAGCGGGCAGTTGGTATTTGGCCCTGCAGAGGGAGCTTCATCACACTGG
ACAATCACCCAACCTCTTTACGAAGAAATCATCAGTACAGTGAATGGCCCGGACGCCTGTTTAACACTGACGGGTGACAT
GACCAGTGTGGTACTGCAAAAGTGCCTGGGGAGGGACAGTCAGCAATGGACTTTTACGCCCAAGGAAAAAAGGCTTTATG
TAAAAAACAAACTGCTGTCCACATCAGCGCAAGAAATGTGTTTGTTTGCGGCGAATGCCAACAGCGTAAAAATGGCCGCG
TGTGCCAGCGCGGGCAGTCATGATTATCAGTCCAAGCGACTGTGGAATCGGGACGGCAACAACCCCAGTCAGCTGTCAAA
CAAATATATCAGTGATCTGGGAATGGCTAACTACCTACAAATCAATGCCAGCGAACAGTTGATATTGGGTGGCAAAGAAC
AAGGCTCGGCGAACTGGAGTATCGCCAAGCGTTATGGTTACATCAGGAACGTTGAAAAAGGGCAGGAAACGTGCCTCGCG
TTGTCTGCAGATGAAGTCAGCGTCGAGTTTTCTCCCTGTAAAAGTGTGCCCGGCCAAGACTGGCGAATGTCCGTCATCGT
ACCGGGGTATGACAAATTGACCAATCGCGCGCTGCTGGACAGGGATACAGAAAAGTGCTTAGGGTCCACTAGTAAAATGA
TCAACTGCCAAGGTACCGGGTATACCTCGGAGCGTTCCTGGAGTTACAACAGGAACTTCATTCCCCTCATAGAAGGGTTT
GTACTGGCCAATAAATATCGCAACGACCTTGTCGGTGATAACGAAGTTCTGGGCTTTGCAGGTAACACCATCCAGATGGT
GCCGGAGTCACGGTCGAAGGCAGTGACATGGAACTTTGAATTGGCAGTACCCAAGATCCCCAGACGCCCCATCGTAGGCG
ATAGAAAAGTTCTCCTGCTGCACACCCGATACAGTGACAAGCCAGAAACCGACTTCGAGGCCACCAGGGAGGCCTTCTTC
GGAGCGCCCGGTGATAACACATCATTTGTCAACGCGGTCTCTTTTTCCTCCGGCGATCATCTGAAGTTCATCGGGGATGC
GGTGACCGGTCTAGACCTGGGCCCCAGACCTTCAGGTTGCCCCTCCACTGAACTGAGGAACAAAGCGATAGAACTCGCAC
GCGACAAGGGAACTGACAGGGATAATTACGATTATGTCGCCGTTGAGATTCCTTCTACTTCGTGCTCCTGGGGTGGGCTT
GCTGCGATGCCGGGCTGGTGGGCCATGGGAAATAATTCGGGCCACAAGCCATGGATGTGGCAACACGAATTCGGTCATAG
CCTCGGCGGACCTCATGCGACCTCGCTGGAGCGCTGCCCTTACAATAGTCGGGAAGTTGTGCAAATCGGCGCCAGTGGGT
GCGCAGTCACTAATAGCGCTGACCCTTCGGATACCCTGAATGGTGGGGGGTCACGTCTTTACCCCATTCCTTATTTGTAC
TACGCGGGCTGGCTCACTGATGACCAATTTCCTGAAGTGATGAAAAATGGCACCTATAACATTGCACCCTTGTTCAGAGC
GGCGGATCCCGAAGTGGTCAAAGGCTTACGCCTGTTTCGTAGCGATGGCAGTTATCTCACGCTGGAATTCCGCAAGCCTT
CACCCGGCTTTGAAAACTGGCCAACTGACGATCCATTTGTCAATGGTGTGATTGTGAGAATCGCTCGTTTTAATGGCAAC
TCCGTCTCCAACACGCTCGTGGACACAACGCCATCAGGCATACATGGCATGAATGACGCTCCGTTGCGGCAAGGTGGGTC
GGCAGACGACGTTTTATCCGGGAAGCGAATCAGAGTGACCCATGCCGATGACACGGGGGCTACCGTTGAAATCAACGATA
TTCCTGGTAGCTCTTTGGCAGAACGCTTGCTCTTTGAACGCTCTTTTAATAAGCAGATTGCAGAACAGGATGATGAGGTG
GTGGAAGATTGA

Upstream 100 bases:

>100_bases
ATCCTGTGTTAACCGCGAACTTTTAGTTCAGAAACAGTTATAGGGCAAGCAAAATACAGACGGCGCAAGGGATGCGCCGA
CACAAGCAACAGGGAGAGTT

Downstream 100 bases:

>100_bases
GGATTTGCCGAAAGGTAATCTCAATCAAAAAATGTCGACTGCATCAGTATCAACTGCACGCCATCAATCACCTGCATCAT
GGATAAAAACGGGGAGCGAT

Product: Ricin B lectin

Products: NA

Alternate protein names: Lectin Repeat Domain Protein; Ricin B Lectin

Number of amino acids: Translated: 803; Mature: 803

Protein sequence:

>803_residues
MKTMPAFTYVFFLGFFHSNAFSTEMNPYEQIISIAQGEQVCLTLDSDLSSVSLQKCVNTDYQQWIFVSSGSMLYLKNKAL
GGSTQAMCLSASNPRHVSMKTCASADSNDYQSLRLWSRDGDHTSVLSNKYIKDLGFDNYLLSDGSGQLVFGPAEGASSHW
TITQPLYEEIISTVNGPDACLTLTGDMTSVVLQKCLGRDSQQWTFTPKEKRLYVKNKLLSTSAQEMCLFAANANSVKMAA
CASAGSHDYQSKRLWNRDGNNPSQLSNKYISDLGMANYLQINASEQLILGGKEQGSANWSIAKRYGYIRNVEKGQETCLA
LSADEVSVEFSPCKSVPGQDWRMSVIVPGYDKLTNRALLDRDTEKCLGSTSKMINCQGTGYTSERSWSYNRNFIPLIEGF
VLANKYRNDLVGDNEVLGFAGNTIQMVPESRSKAVTWNFELAVPKIPRRPIVGDRKVLLLHTRYSDKPETDFEATREAFF
GAPGDNTSFVNAVSFSSGDHLKFIGDAVTGLDLGPRPSGCPSTELRNKAIELARDKGTDRDNYDYVAVEIPSTSCSWGGL
AAMPGWWAMGNNSGHKPWMWQHEFGHSLGGPHATSLERCPYNSREVVQIGASGCAVTNSADPSDTLNGGGSRLYPIPYLY
YAGWLTDDQFPEVMKNGTYNIAPLFRAADPEVVKGLRLFRSDGSYLTLEFRKPSPGFENWPTDDPFVNGVIVRIARFNGN
SVSNTLVDTTPSGIHGMNDAPLRQGGSADDVLSGKRIRVTHADDTGATVEINDIPGSSLAERLLFERSFNKQIAEQDDEV
VED

Sequences:

>Translated_803_residues
MKTMPAFTYVFFLGFFHSNAFSTEMNPYEQIISIAQGEQVCLTLDSDLSSVSLQKCVNTDYQQWIFVSSGSMLYLKNKAL
GGSTQAMCLSASNPRHVSMKTCASADSNDYQSLRLWSRDGDHTSVLSNKYIKDLGFDNYLLSDGSGQLVFGPAEGASSHW
TITQPLYEEIISTVNGPDACLTLTGDMTSVVLQKCLGRDSQQWTFTPKEKRLYVKNKLLSTSAQEMCLFAANANSVKMAA
CASAGSHDYQSKRLWNRDGNNPSQLSNKYISDLGMANYLQINASEQLILGGKEQGSANWSIAKRYGYIRNVEKGQETCLA
LSADEVSVEFSPCKSVPGQDWRMSVIVPGYDKLTNRALLDRDTEKCLGSTSKMINCQGTGYTSERSWSYNRNFIPLIEGF
VLANKYRNDLVGDNEVLGFAGNTIQMVPESRSKAVTWNFELAVPKIPRRPIVGDRKVLLLHTRYSDKPETDFEATREAFF
GAPGDNTSFVNAVSFSSGDHLKFIGDAVTGLDLGPRPSGCPSTELRNKAIELARDKGTDRDNYDYVAVEIPSTSCSWGGL
AAMPGWWAMGNNSGHKPWMWQHEFGHSLGGPHATSLERCPYNSREVVQIGASGCAVTNSADPSDTLNGGGSRLYPIPYLY
YAGWLTDDQFPEVMKNGTYNIAPLFRAADPEVVKGLRLFRSDGSYLTLEFRKPSPGFENWPTDDPFVNGVIVRIARFNGN
SVSNTLVDTTPSGIHGMNDAPLRQGGSADDVLSGKRIRVTHADDTGATVEINDIPGSSLAERLLFERSFNKQIAEQDDEV
VED
>Mature_803_residues
MKTMPAFTYVFFLGFFHSNAFSTEMNPYEQIISIAQGEQVCLTLDSDLSSVSLQKCVNTDYQQWIFVSSGSMLYLKNKAL
GGSTQAMCLSASNPRHVSMKTCASADSNDYQSLRLWSRDGDHTSVLSNKYIKDLGFDNYLLSDGSGQLVFGPAEGASSHW
TITQPLYEEIISTVNGPDACLTLTGDMTSVVLQKCLGRDSQQWTFTPKEKRLYVKNKLLSTSAQEMCLFAANANSVKMAA
CASAGSHDYQSKRLWNRDGNNPSQLSNKYISDLGMANYLQINASEQLILGGKEQGSANWSIAKRYGYIRNVEKGQETCLA
LSADEVSVEFSPCKSVPGQDWRMSVIVPGYDKLTNRALLDRDTEKCLGSTSKMINCQGTGYTSERSWSYNRNFIPLIEGF
VLANKYRNDLVGDNEVLGFAGNTIQMVPESRSKAVTWNFELAVPKIPRRPIVGDRKVLLLHTRYSDKPETDFEATREAFF
GAPGDNTSFVNAVSFSSGDHLKFIGDAVTGLDLGPRPSGCPSTELRNKAIELARDKGTDRDNYDYVAVEIPSTSCSWGGL
AAMPGWWAMGNNSGHKPWMWQHEFGHSLGGPHATSLERCPYNSREVVQIGASGCAVTNSADPSDTLNGGGSRLYPIPYLY
YAGWLTDDQFPEVMKNGTYNIAPLFRAADPEVVKGLRLFRSDGSYLTLEFRKPSPGFENWPTDDPFVNGVIVRIARFNGN
SVSNTLVDTTPSGIHGMNDAPLRQGGSADDVLSGKRIRVTHADDTGATVEINDIPGSSLAERLLFERSFNKQIAEQDDEV
VED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 88385; Mature: 88385

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS50231 RICIN_B_LECTIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTMPAFTYVFFLGFFHSNAFSTEMNPYEQIISIAQGEQVCLTLDSDLSSVSLQKCVNTD
CCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCC
YQQWIFVSSGSMLYLKNKALGGSTQAMCLSASNPRHVSMKTCASADSNDYQSLRLWSRDG
CCEEEEEECCCEEEEECCCCCCCCCEEEEECCCCCEEEHHHHCCCCCCCCCEEEEECCCC
DHTSVLSNKYIKDLGFDNYLLSDGSGQLVFGPAEGASSHWTITQPLYEEIISTVNGPDAC
CCHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCCCCEEECHHHHHHHHHHCCCCCEE
LTLTGDMTSVVLQKCLGRDSQQWTFTPKEKRLYVKNKLLSTSAQEMCLFAANANSVKMAA
EEEECCHHHHHHHHHHCCCCCCEEECCHHCEEEEHHHHHHCCCHHEEEEECCCCCEEEEE
CASAGSHDYQSKRLWNRDGNNPSQLSNKYISDLGMANYLQINASEQLILGGKEQGSANWS
ECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCCCCH
IAKRYGYIRNVEKGQETCLALSADEVSVEFSPCKSVPGQDWRMSVIVPGYDKLTNRALLD
HHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCCCCCCCCEEEEEEECCHHHHHCCHHHC
RDTEKCLGSTSKMINCQGTGYTSERSWSYNRNFIPLIEGFVLANKYRNDLVGDNEVLGFA
CCHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEC
GNTIQMVPESRSKAVTWNFELAVPKIPRRPIVGDRKVLLLHTRYSDKPETDFEATREAFF
CCEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHC
GAPGDNTSFVNAVSFSSGDHLKFIGDAVTGLDLGPRPSGCPSTELRNKAIELARDKGTDR
CCCCCCCCEEEEEECCCCCCEEEECCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
DNYDYVAVEIPSTSCSWGGLAAMPGWWAMGNNSGHKPWMWQHEFGHSLGGPHATSLERCP
CCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCEEEHHHHCCCCCCCCCCCHHHCC
YNSREVVQIGASGCAVTNSADPSDTLNGGGSRLYPIPYLYYAGWLTDDQFPEVMKNGTYN
CCCCEEEEECCCCEEECCCCCCCCCCCCCCCEEECCCEEEEECCCCCCCCHHHHHCCCEE
IAPLFRAADPEVVKGLRLFRSDGSYLTLEFRKPSPGFENWPTDDPFVNGVIVRIARFNGN
EEEEEECCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHCEEEEEEEEECCC
SVSNTLVDTTPSGIHGMNDAPLRQGGSADDVLSGKRIRVTHADDTGATVEINDIPGSSLA
CCCCCEEECCCCCCCCCCCCCCCCCCCCCHHCCCCEEEEEECCCCCCEEEEECCCCHHHH
ERLLFERSFNKQIAEQDDEVVED
HHHHHHHHHHHHHHHCCHHHHCC
>Mature Secondary Structure
MKTMPAFTYVFFLGFFHSNAFSTEMNPYEQIISIAQGEQVCLTLDSDLSSVSLQKCVNTD
CCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCC
YQQWIFVSSGSMLYLKNKALGGSTQAMCLSASNPRHVSMKTCASADSNDYQSLRLWSRDG
CCEEEEEECCCEEEEECCCCCCCCCEEEEECCCCCEEEHHHHCCCCCCCCCEEEEECCCC
DHTSVLSNKYIKDLGFDNYLLSDGSGQLVFGPAEGASSHWTITQPLYEEIISTVNGPDAC
CCHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCCCCEEECHHHHHHHHHHCCCCCEE
LTLTGDMTSVVLQKCLGRDSQQWTFTPKEKRLYVKNKLLSTSAQEMCLFAANANSVKMAA
EEEECCHHHHHHHHHHCCCCCCEEECCHHCEEEEHHHHHHCCCHHEEEEECCCCCEEEEE
CASAGSHDYQSKRLWNRDGNNPSQLSNKYISDLGMANYLQINASEQLILGGKEQGSANWS
ECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCCCCH
IAKRYGYIRNVEKGQETCLALSADEVSVEFSPCKSVPGQDWRMSVIVPGYDKLTNRALLD
HHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCCCCCCCCEEEEEEECCHHHHHCCHHHC
RDTEKCLGSTSKMINCQGTGYTSERSWSYNRNFIPLIEGFVLANKYRNDLVGDNEVLGFA
CCHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEC
GNTIQMVPESRSKAVTWNFELAVPKIPRRPIVGDRKVLLLHTRYSDKPETDFEATREAFF
CCEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHC
GAPGDNTSFVNAVSFSSGDHLKFIGDAVTGLDLGPRPSGCPSTELRNKAIELARDKGTDR
CCCCCCCCEEEEEECCCCCCEEEECCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
DNYDYVAVEIPSTSCSWGGLAAMPGWWAMGNNSGHKPWMWQHEFGHSLGGPHATSLERCP
CCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCEEEHHHHCCCCCCCCCCCHHHCC
YNSREVVQIGASGCAVTNSADPSDTLNGGGSRLYPIPYLYYAGWLTDDQFPEVMKNGTYN
CCCCEEEEECCCCEEECCCCCCCCCCCCCCCEEECCCEEEEECCCCCCCCHHHHHCCCEE
IAPLFRAADPEVVKGLRLFRSDGSYLTLEFRKPSPGFENWPTDDPFVNGVIVRIARFNGN
EEEEEECCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHCEEEEEEEEECCC
SVSNTLVDTTPSGIHGMNDAPLRQGGSADDVLSGKRIRVTHADDTGATVEINDIPGSSLA
CCCCCEEECCCCCCCCCCCCCCCCCCCCCHHCCCCEEEEEECCCCCCEEEEECCCCHHHH
ERLLFERSFNKQIAEQDDEVVED
HHHHHHHHHHHHHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA