BacMap

Definition	Pseudomonas syringae pv. syringae B728a, complete genome.
Accession	NC_007005
Length	6,093,698

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The map label for this gene is fabG [H]

Identifier: 66045692

GI number: 66045692

Start: 2844551

End: 2845318

Strand: Reverse

Name: fabG [H]

Synonym: Psyr_2456

Alternate gene names: 66045692

Gene position: 2845318-2844551 (Counterclockwise)

Preceding gene: 66045693

Following gene: 66045691

Centisome position: 46.69

GC content: 59.77

Gene sequence:

>768_bases
ATGTCCAGAACCCAGCTATTCGACCTTGATGGCAAGGTTGCATTCGTTTCAGGTGCCAGCCGAGGCATCGGTGAAGCCAT
TGCTCGGCTGCTGGCCCAGCAAGGCGCGCACGTTATCGTCTCGAGTCGCCGGCTCGAGGGTTGCCAGGCAGTGGCGGACG
CCATCGTCAGCGAGGGTGGCAAGGCAACAGCCATTGCCTGCCACATCGGTGAGCTGGAACAGATAAACAGTGCATTCGCG
CAGATTCGCCAACAGTTCGGGCGCCTGGATGTCCTGGTCAACAACGCCGCCACCAACCCGCAGTTCTGCAACGTGCTGGA
CACCGATCCCGGCGCCTTCCAGAAGACAGTCGACGTCAACATTCGCGGTTACTTTTTCATGTCCGTGGAAGCCGGCAAGC
TGATGCGCGAAAACGGTGGCGGCAGCATCATCAACGTGGCGTCCATCAACGCGGTATCGCCGGGTGCCTATCAAGGCGTC
TATTCGATGACCAAGGCAGCCGTGGTCAACATGACCAAGGTGTTTGCCAAGGAGTGCGCTGAATTCGGTATTCGCTGCAA
CGCCCTGCTTCCCGGCTTGACTGACACCAGGTTCGCATCCGCATTGGTCAAGAACGACGCAATCCTCAATGTGGCGCTGT
CCCAGATCCCGCTGAAACGCGTGGCCGCTCCCAGCGAGATGGCCGGCGCGGTGCTTTACCTGGCCAGTGAAGCCTCCAGC
TATACCACCGGTGTGGCGCTGAACGTCGACGGGGGCTTTTTATCCTGA

Upstream 100 bases:

>100_bases
TGCCCAATTCATTCACATGAACAGGCTGCTGGAGCAAATGAGCCTGCGCGTGATCGAAAAAACCAGCCTCTGACCGCCAG
CGGCAAGACAAGGAAATCAC

Downstream 100 bases:

>100_bases
AGAACCGCCGGACTGGCAAAAAGAAGGTGAATTAATTTTCCATTATTAAAATATATGGAATATATTTTCCGCATAACAAC
AATCCTGTCTGGAGAATGTC

Product: short chain dehydrogenase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MSRTQLFDLDGKVAFVSGASRGIGEAIARLLAQQGAHVIVSSRRLEGCQAVADAIVSEGGKATAIACHIGELEQINSAFA
QIRQQFGRLDVLVNNAATNPQFCNVLDTDPGAFQKTVDVNIRGYFFMSVEAGKLMRENGGGSIINVASINAVSPGAYQGV
YSMTKAAVVNMTKVFAKECAEFGIRCNALLPGLTDTRFASALVKNDAILNVALSQIPLKRVAAPSEMAGAVLYLASEASS
YTTGVALNVDGGFLS

Sequences:

>Translated_255_residues
MSRTQLFDLDGKVAFVSGASRGIGEAIARLLAQQGAHVIVSSRRLEGCQAVADAIVSEGGKATAIACHIGELEQINSAFA
QIRQQFGRLDVLVNNAATNPQFCNVLDTDPGAFQKTVDVNIRGYFFMSVEAGKLMRENGGGSIINVASINAVSPGAYQGV
YSMTKAAVVNMTKVFAKECAEFGIRCNALLPGLTDTRFASALVKNDAILNVALSQIPLKRVAAPSEMAGAVLYLASEASS
YTTGVALNVDGGFLS
>Mature_254_residues
SRTQLFDLDGKVAFVSGASRGIGEAIARLLAQQGAHVIVSSRRLEGCQAVADAIVSEGGKATAIACHIGELEQINSAFAQ
IRQQFGRLDVLVNNAATNPQFCNVLDTDPGAFQKTVDVNIRGYFFMSVEAGKLMRENGGGSIINVASINAVSPGAYQGVY
SMTKAAVVNMTKVFAKECAEFGIRCNALLPGLTDTRFASALVKNDAILNVALSQIPLKRVAAPSEMAGAVLYLASEASSY
TTGVALNVDGGFLS

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=249, Percent_Identity=36.9477911646586, Blast_Score=159, Evalue=2e-39,
Organism=Homo sapiens, GI5031737, Length=243, Percent_Identity=32.9218106995885, Blast_Score=128, Evalue=4e-30,
Organism=Homo sapiens, GI126723191, Length=198, Percent_Identity=36.8686868686869, Blast_Score=121, Evalue=7e-28,
Organism=Homo sapiens, GI126723750, Length=247, Percent_Identity=30.7692307692308, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI40254992, Length=242, Percent_Identity=33.8842975206612, Blast_Score=119, Evalue=2e-27,
Organism=Homo sapiens, GI19923817, Length=256, Percent_Identity=30.859375, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI33667109, Length=191, Percent_Identity=35.0785340314136, Blast_Score=112, Evalue=4e-25,
Organism=Homo sapiens, GI209862901, Length=215, Percent_Identity=34.4186046511628, Blast_Score=108, Evalue=3e-24,
Organism=Homo sapiens, GI19923983, Length=215, Percent_Identity=34.4186046511628, Blast_Score=108, Evalue=3e-24,
Organism=Homo sapiens, GI10190704, Length=247, Percent_Identity=33.1983805668016, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI7705925, Length=252, Percent_Identity=32.1428571428571, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI4503301, Length=248, Percent_Identity=28.2258064516129, Blast_Score=99, Evalue=3e-21,
Organism=Homo sapiens, GI15277342, Length=254, Percent_Identity=29.1338582677165, Blast_Score=99, Evalue=3e-21,
Organism=Homo sapiens, GI31542939, Length=211, Percent_Identity=32.7014218009479, Blast_Score=97, Evalue=9e-21,
Organism=Homo sapiens, GI59889578, Length=228, Percent_Identity=28.0701754385965, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI109715829, Length=253, Percent_Identity=30.4347826086957, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI224922801, Length=176, Percent_Identity=34.0909090909091, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI66933014, Length=250, Percent_Identity=30.8, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI4758504, Length=255, Percent_Identity=29.4117647058824, Blast_Score=81, Evalue=8e-16,
Organism=Homo sapiens, GI225579078, Length=243, Percent_Identity=27.5720164609054, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI40254986, Length=196, Percent_Identity=29.5918367346939, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI302344755, Length=118, Percent_Identity=35.5932203389831, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI32455239, Length=194, Percent_Identity=30.4123711340206, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI5031765, Length=194, Percent_Identity=30.4123711340206, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI4504505, Length=257, Percent_Identity=27.2373540856031, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI83715985, Length=255, Percent_Identity=27.843137254902, Blast_Score=69, Evalue=4e-12,
Organism=Escherichia coli, GI1787335, Length=247, Percent_Identity=32.7935222672065, Blast_Score=128, Evalue=3e-31,
Organism=Escherichia coli, GI87082100, Length=253, Percent_Identity=32.4110671936759, Blast_Score=128, Evalue=4e-31,
Organism=Escherichia coli, GI1788459, Length=250, Percent_Identity=35.2, Blast_Score=124, Evalue=8e-30,
Organism=Escherichia coli, GI87082160, Length=250, Percent_Identity=32, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1789208, Length=250, Percent_Identity=31.2, Blast_Score=119, Evalue=1e-28,
Organism=Escherichia coli, GI2367175, Length=246, Percent_Identity=35.3658536585366, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1790717, Length=257, Percent_Identity=29.1828793774319, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1787905, Length=248, Percent_Identity=34.6774193548387, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1789378, Length=247, Percent_Identity=33.1983805668016, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI2367365, Length=244, Percent_Identity=31.1475409836066, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1786812, Length=254, Percent_Identity=29.1338582677165, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1789057, Length=254, Percent_Identity=29.5275590551181, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787526, Length=251, Percent_Identity=25.8964143426295, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1787820, Length=201, Percent_Identity=27.8606965174129, Blast_Score=69, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17560676, Length=245, Percent_Identity=31.4285714285714, Blast_Score=137, Evalue=6e-33,
Organism=Caenorhabditis elegans, GI17561402, Length=248, Percent_Identity=33.0645161290323, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17536025, Length=251, Percent_Identity=31.8725099601594, Blast_Score=112, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI71994600, Length=248, Percent_Identity=34.2741935483871, Blast_Score=108, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI25147288, Length=247, Percent_Identity=33.1983805668016, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI71994604, Length=247, Percent_Identity=33.6032388663968, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17536651, Length=250, Percent_Identity=30.4, Blast_Score=107, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI193204405, Length=262, Percent_Identity=34.7328244274809, Blast_Score=107, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI17562910, Length=259, Percent_Identity=32.046332046332, Blast_Score=107, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI17555706, Length=256, Percent_Identity=32.8125, Blast_Score=106, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17562906, Length=262, Percent_Identity=32.4427480916031, Blast_Score=106, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17562908, Length=267, Percent_Identity=33.7078651685393, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17561272, Length=254, Percent_Identity=30.3149606299213, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17560220, Length=265, Percent_Identity=31.3207547169811, Blast_Score=100, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI17562904, Length=261, Percent_Identity=33.7164750957854, Blast_Score=98, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17560332, Length=258, Percent_Identity=30.2325581395349, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI71997099, Length=216, Percent_Identity=31.0185185185185, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17531453, Length=263, Percent_Identity=29.277566539924, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI115534694, Length=250, Percent_Identity=31.2, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17538182, Length=252, Percent_Identity=32.9365079365079, Blast_Score=91, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17560150, Length=262, Percent_Identity=28.6259541984733, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17544670, Length=264, Percent_Identity=28.030303030303, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17559104, Length=263, Percent_Identity=31.5589353612167, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17555612, Length=215, Percent_Identity=29.3023255813954, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17562990, Length=258, Percent_Identity=29.0697674418605, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17563726, Length=258, Percent_Identity=29.0697674418605, Blast_Score=84, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17551412, Length=261, Percent_Identity=29.8850574712644, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17508651, Length=245, Percent_Identity=27.7551020408163, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI72000259, Length=263, Percent_Identity=28.8973384030418, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17538480, Length=261, Percent_Identity=28.735632183908, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI86565303, Length=223, Percent_Identity=26.0089686098655, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17538486, Length=262, Percent_Identity=27.8625954198473, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17565030, Length=265, Percent_Identity=29.811320754717, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17568967, Length=211, Percent_Identity=29.3838862559242, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17558628, Length=191, Percent_Identity=27.7486910994764, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71982365, Length=190, Percent_Identity=25.2631578947368, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=256, Percent_Identity=29.296875, Blast_Score=96, Evalue=5e-21,
Organism=Saccharomyces cerevisiae, GI6322861, Length=245, Percent_Identity=29.3877551020408, Blast_Score=76, Evalue=6e-15,
Organism=Saccharomyces cerevisiae, GI6323882, Length=196, Percent_Identity=28.0612244897959, Blast_Score=64, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21355319, Length=245, Percent_Identity=37.9591836734694, Blast_Score=171, Evalue=5e-43,
Organism=Drosophila melanogaster, GI24639444, Length=247, Percent_Identity=34.0080971659919, Blast_Score=127, Evalue=6e-30,
Organism=Drosophila melanogaster, GI23397609, Length=251, Percent_Identity=31.4741035856574, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI21357041, Length=252, Percent_Identity=32.5396825396825, Blast_Score=103, Evalue=8e-23,
Organism=Drosophila melanogaster, GI24643142, Length=253, Percent_Identity=33.201581027668, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24644339, Length=255, Percent_Identity=31.3725490196078, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI28571526, Length=254, Percent_Identity=33.0708661417323, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24644337, Length=251, Percent_Identity=30.6772908366534, Blast_Score=91, Evalue=9e-19,
Organism=Drosophila melanogaster, GI24641232, Length=212, Percent_Identity=32.0754716981132, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI17737361, Length=257, Percent_Identity=29.5719844357977, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI116007234, Length=235, Percent_Identity=29.3617021276596, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21357673, Length=192, Percent_Identity=29.1666666666667, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI116007236, Length=198, Percent_Identity=26.7676767676768, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24649181, Length=190, Percent_Identity=25.7894736842105, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI116007232, Length=181, Percent_Identity=31.4917127071823, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24663911, Length=236, Percent_Identity=27.9661016949153, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24640442, Length=197, Percent_Identity=29.9492385786802, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI19921754, Length=226, Percent_Identity=26.9911504424779, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24648944, Length=235, Percent_Identity=30.2127659574468, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24584748, Length=194, Percent_Identity=27.319587628866, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI161076933, Length=194, Percent_Identity=27.319587628866, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI116007238, Length=183, Percent_Identity=26.2295081967213, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI45553409, Length=204, Percent_Identity=26.4705882352941, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24647948, Length=204, Percent_Identity=26.4705882352941, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24647946, Length=204, Percent_Identity=26.4705882352941, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24586328, Length=240, Percent_Identity=27.0833333333333, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI22024069, Length=235, Percent_Identity=26.8085106382979, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24641388, Length=232, Percent_Identity=28.448275862069, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI281364494, Length=206, Percent_Identity=26.6990291262136, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 26713; Mature: 26582

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTQLFDLDGKVAFVSGASRGIGEAIARLLAQQGAHVIVSSRRLEGCQAVADAIVSEGG
CCCCEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCC
KATAIACHIGELEQINSAFAQIRQQFGRLDVLVNNAATNPQFCNVLDTDPGAFQKTVDVN
CEEEEEEECCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEECCCCCCEEEEEEE
IRGYFFMSVEAGKLMRENGGGSIINVASINAVSPGAYQGVYSMTKAAVVNMTKVFAKECA
EEEEEEEEECCCHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EFGIRCNALLPGLTDTRFASALVKNDAILNVALSQIPLKRVAAPSEMAGAVLYLASEASS
HHCCEEEEECCCCCHHHHHHHHHHCCHHEEHHHHHCCHHHHCCCHHHCCEEEEEECCCCC
YTTGVALNVDGGFLS
CCCEEEEECCCCCCC
>Mature Secondary Structure 
SRTQLFDLDGKVAFVSGASRGIGEAIARLLAQQGAHVIVSSRRLEGCQAVADAIVSEGG
CCCEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCC
KATAIACHIGELEQINSAFAQIRQQFGRLDVLVNNAATNPQFCNVLDTDPGAFQKTVDVN
CEEEEEEECCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEECCCCCCEEEEEEE
IRGYFFMSVEAGKLMRENGGGSIINVASINAVSPGAYQGVYSMTKAAVVNMTKVFAKECA
EEEEEEEEECCCHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EFGIRCNALLPGLTDTRFASALVKNDAILNVALSQIPLKRVAAPSEMAGAVLYLASEASS
HHCCEEEEECCCCCHHHHHHHHHHCCHHEEHHHHHCCHHHHCCCHHHCCEEEEEECCCCC
YTTGVALNVDGGFLS
CCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]