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The map label for this gene is ydgJ [C]

Identifier: 66045691

GI number: 66045691

Start: 2843302

End: 2844450

Strand: Reverse

Name: ydgJ [C]

Synonym: Psyr_2455

Alternate gene names: 66045691

Gene position: 2844450-2843302 (Counterclockwise)

Preceding gene: 66045692

Following gene: 66045690

Centisome position: 46.68

GC content: 64.23

Gene sequence:

>1149_bases
ATGCGCGAATCACTTTCCACATCGCCTGCGCAACTGGGTATCGGACTGATCGGCACCGGCTTCATGGGCCGTGCCCATGC
GTTGGCGTTCGGCAACGCCAACGCTGCGCTTGATCTGCCCGCACGCATCCGGCTCTGCGCGCTGGCGGACGCCGACAGTG
CACGCGCCGAGCAATGCGCAAGCGCCTGGGGGTTCGACCGCAGCCACGCTGACTGGCAGCAATTGATCGATGATCCGCAC
GTACAGATCGTGGCCATTACCACCCCCAATCACCTGCACTTCCCCATGGCCATGGCTGCCATCGCCGCAGGCAAGGCGGT
GTATTGCGAAAAACCGCTGGCCGTGAATCTCGCCGAGGCCGATGAAATGCGCCGCAGCGCCAAGGCTGCGGGTGTCGTTA
CCCAGGTGGGCTACAACTACCAGCACAACCCGATGATCGGACTCGCCAGGGAAATGATCGAAGCCGGCGAACTGGGCGAA
ATCGTCAGCTTTCAGGGCGAGTTCAGCGAGGATTTCATGGGCGATCCGGCGTCACCCTGGTCGTGGCGCTGTGAAGCGGC
GCATGCCGGCGGTGCACTGGCCGATCTGGGCAGCCACTTGCTGGCGATGGCGCGTCATTTGCTGGGCGACATCGAAGCAG
TCTGCGCCGATGCCAGCACCGTACACCGTGAACGCCCGGCGAGCATCGGCAGCCAGCAACTGCGCGCCATTGCGGTGGAC
GACCAGACCCACGCGCTGCTGCGCTTTGCCAACGGTGCGCGCGGAACCTTCAGCAGCAGCTGGCTCAAACACGGCTATAA
AAACCACCTGAGTTTCGAGATCAGCGGCACCAAAGGCACGTTGGCGTTCGATCAGGAGCGGCTCAACGAGCTGCGCCTCT
ACCGTACAGGCGCAGCCGGACGCGATGGTTTTCAGCGACTGCTGGCCGGCCCAGCACAACCGGGTTACGCCGCATTCTGC
CCGGCTCCCGGCCACCAGCTGGGCTACAACGAGCTCAAGGCGCTCGAAGTACAAGCGCTCATCCAGGCCGTCTATGGTCA
GCGCAGCCGTGGCCCGGACTTCGAGGAAGCGTGGCAAATCGAACGCCTGGCGACGGCCATTCGCGTGGCCGCAGCCGAGC
AACGCTGGGTCGCGCTCACCGACATCTGA

Upstream 100 bases:

>100_bases
AGAACCGCCGGACTGGCAAAAAGAAGGTGAATTAATTTTCCATTATTAAAATATATGGAATATATTTTCCGCATAACAAC
AATCCTGTCTGGAGAATGTC

Downstream 100 bases:

>100_bases
CTTCCTGCAAACGTTGTACAAAGGGTAGAATGCGCCACGTTCGGGCAGTCATTCTGCCCCTTTGCCGCCCTCGCCATAAG
CCCTCTGCCACCATGCCCTT

Product: oxidoreductase, N-terminal:oxidoreductase, C-terminal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MRESLSTSPAQLGIGLIGTGFMGRAHALAFGNANAALDLPARIRLCALADADSARAEQCASAWGFDRSHADWQQLIDDPH
VQIVAITTPNHLHFPMAMAAIAAGKAVYCEKPLAVNLAEADEMRRSAKAAGVVTQVGYNYQHNPMIGLAREMIEAGELGE
IVSFQGEFSEDFMGDPASPWSWRCEAAHAGGALADLGSHLLAMARHLLGDIEAVCADASTVHRERPASIGSQQLRAIAVD
DQTHALLRFANGARGTFSSSWLKHGYKNHLSFEISGTKGTLAFDQERLNELRLYRTGAAGRDGFQRLLAGPAQPGYAAFC
PAPGHQLGYNELKALEVQALIQAVYGQRSRGPDFEEAWQIERLATAIRVAAAEQRWVALTDI

Sequences:

>Translated_382_residues
MRESLSTSPAQLGIGLIGTGFMGRAHALAFGNANAALDLPARIRLCALADADSARAEQCASAWGFDRSHADWQQLIDDPH
VQIVAITTPNHLHFPMAMAAIAAGKAVYCEKPLAVNLAEADEMRRSAKAAGVVTQVGYNYQHNPMIGLAREMIEAGELGE
IVSFQGEFSEDFMGDPASPWSWRCEAAHAGGALADLGSHLLAMARHLLGDIEAVCADASTVHRERPASIGSQQLRAIAVD
DQTHALLRFANGARGTFSSSWLKHGYKNHLSFEISGTKGTLAFDQERLNELRLYRTGAAGRDGFQRLLAGPAQPGYAAFC
PAPGHQLGYNELKALEVQALIQAVYGQRSRGPDFEEAWQIERLATAIRVAAAEQRWVALTDI
>Mature_382_residues
MRESLSTSPAQLGIGLIGTGFMGRAHALAFGNANAALDLPARIRLCALADADSARAEQCASAWGFDRSHADWQQLIDDPH
VQIVAITTPNHLHFPMAMAAIAAGKAVYCEKPLAVNLAEADEMRRSAKAAGVVTQVGYNYQHNPMIGLAREMIEAGELGE
IVSFQGEFSEDFMGDPASPWSWRCEAAHAGGALADLGSHLLAMARHLLGDIEAVCADASTVHRERPASIGSQQLRAIAVD
DQTHALLRFANGARGTFSSSWLKHGYKNHLSFEISGTKGTLAFDQERLNELRLYRTGAAGRDGFQRLLAGPAQPGYAAFC
PAPGHQLGYNELKALEVQALIQAVYGQRSRGPDFEEAWQIERLATAIRVAAAEQRWVALTDI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=239, Percent_Identity=27.6150627615063, Blast_Score=84, Evalue=2e-16,
Organism=Escherichia coli, GI87081947, Length=265, Percent_Identity=26.4150943396226, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI87082405, Length=292, Percent_Identity=25.6849315068493, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1789848, Length=265, Percent_Identity=25.2830188679245, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1787574, Length=260, Percent_Identity=25.3846153846154, Blast_Score=70, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6323975, Length=297, Percent_Identity=25.2525252525253, Blast_Score=97, Evalue=6e-21,
Organism=Drosophila melanogaster, GI24581117, Length=232, Percent_Identity=26.7241379310345, Blast_Score=69, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 41167; Mature: 41167

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRESLSTSPAQLGIGLIGTGFMGRAHALAFGNANAALDLPARIRLCALADADSARAEQCA
CCCCCCCCHHHHCCEEEECCCCCCCEEEEECCCCCEEECCCCEEEEEECCCCHHHHHHHH
SAWGFDRSHADWQQLIDDPHVQIVAITTPNHLHFPMAMAAIAAGKAVYCEKPLAVNLAEA
HHCCCCCCCHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEECCCCEEEHHHH
DEMRRSAKAAGVVTQVGYNYQHNPMIGLAREMIEAGELGEIVSFQGEFSEDFMGDPASPW
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHCCCCCCCHHHCCCCCCCC
SWRCEAAHAGGALADLGSHLLAMARHLLGDIEAVCADASTVHRERPASIGSQQLRAIAVD
CCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHEEEEEEC
DQTHALLRFANGARGTFSSSWLKHGYKNHLSFEISGTKGTLAFDQERLNELRLYRTGAAG
CHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCEEECHHHHHHHHEEECCCCC
RDGFQRLLAGPAQPGYAAFCPAPGHQLGYNELKALEVQALIQAVYGQRSRGPDFEEAWQI
HHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
ERLATAIRVAAAEQRWVALTDI
HHHHHHHHHHHHCCCEEEECCC
>Mature Secondary Structure
MRESLSTSPAQLGIGLIGTGFMGRAHALAFGNANAALDLPARIRLCALADADSARAEQCA
CCCCCCCCHHHHCCEEEECCCCCCCEEEEECCCCCEEECCCCEEEEEECCCCHHHHHHHH
SAWGFDRSHADWQQLIDDPHVQIVAITTPNHLHFPMAMAAIAAGKAVYCEKPLAVNLAEA
HHCCCCCCCHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEECCCCEEEHHHH
DEMRRSAKAAGVVTQVGYNYQHNPMIGLAREMIEAGELGEIVSFQGEFSEDFMGDPASPW
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHCCCCCCCHHHCCCCCCCC
SWRCEAAHAGGALADLGSHLLAMARHLLGDIEAVCADASTVHRERPASIGSQQLRAIAVD
CCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHEEEEEEC
DQTHALLRFANGARGTFSSSWLKHGYKNHLSFEISGTKGTLAFDQERLNELRLYRTGAAG
CHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCEEECHHHHHHHHEEECCCCC
RDGFQRLLAGPAQPGYAAFCPAPGHQLGYNELKALEVQALIQAVYGQRSRGPDFEEAWQI
HHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
ERLATAIRVAAAEQRWVALTDI
HHHHHHHHHHHHCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]