| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045693
Identifier: 66045693
GI number: 66045693
Start: 2845346
End: 2846413
Strand: Reverse
Name: 66045693
Synonym: Psyr_2457
Alternate gene names: NA
Gene position: 2846413-2845346 (Counterclockwise)
Preceding gene: 66045694
Following gene: 66045692
Centisome position: 46.71
GC content: 59.74
Gene sequence:
>1068_bases ATGGCACTGACTGACCAGTCCACCGAGATTCGCAGCGGCGAAGAACTGGACGCCTCCCTGATCGACGCGTACCTGAAGGC GCACGTGCCGGAGCTTCACGGCACGCCGACGATCAGTCAGTTTCCGGGCGGCGCATCGAACCTGACCTACCTGCTTCAGT ACCCTGAGCGGGAACTGGTACTGCGTCGTCCCCCCTTCGGACACAAGGCGCGTTCGGCCCATGACATGGGCCGCGAGTAC CGCATTCTCAATCAGCTCAAGGAAGCCTTTCCCTACTGCCCGGAGGCTTATCTGCACTGCACGGACGAGTCACTGATCGG CTCCGAGTTCTACGTGATGCAGCGCGTCAAGGGGATCATTCTGCGCTCTGACCTGCCGCCGGAACTGGCGCTGGATGCAA CACAGACCGAACAGCTGTGCAAAAACTTCATCGACAAAATGGTAGACCTGCATCGTGTCGATTATCAGGCCTGTGGTCTG GGTGACCTCGGCAAGCCGCAGGGCTACGTACAGCGGCAGATTTCCGGTTGGTCCGAGCGCTACGAGAAAGCGCTGACCCC GGACGCTCCGGCGTGGGAGCAGGTCAAGCGCTGGCTGGCAGACAAAATGCCGGCCGACTCGCCGACCTCGAGCATCGTGC ATAACGACTACCGTTTCGACAATGTGATCCTCGACCCGGCCAACCCGATGCACATCATCGGCGTACTGGACTGGGAGCTG ACCACGCTCGGCGATCCGCTCATGGACCTGGGCAACACCCTCGCCTACTGGATACAGGCCGACGATCCAGCCCCGGTGCA ACTGATGCGCCGCCAGCCAAGCAATGCGCCGGGAATGCTGACCCGCCAGGCTTTTGTCGACTATTACGCCGAGCGCGCAG GCGTGCGCATAGACAATTTCGATTTCTACTACACCTATGGCCTGTTCCGTCTGGCCGGTATCGTGCAACAGATCTACTAC CGGTTTTTTCACGGCCAGACCCAGGACAAACGCTTTGCCCAATTCATTCACATGAACAGGCTGCTGGAGCAAATGAGCCT GCGCGTGATCGAAAAAACCAGCCTCTGA
Upstream 100 bases:
>100_bases CACGCTAGCCTATAAAGCGGTCCTGCGCTTGATCGCGGATTGGACGATCATTAGATTAGTCAATAGTTTGCGCTGACCAT AATAAGCAAAAGGGATACGT
Downstream 100 bases:
>100_bases CCGCCAGCGGCAAGACAAGGAAATCACATGTCCAGAACCCAGCTATTCGACCTTGATGGCAAGGTTGCATTCGTTTCAGG TGCCAGCCGAGGCATCGGTG
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Family Protein; Acyl-CoA Dehydrogenase; Phosphotransferase Family; Acyl-Co A Dehydrogenase; Acyl-CoA Dehydrogenase FadE; Tyrosine Protein Kinase/Aminoglycoside Phosphotransferase; Acyl-CoA Dehydrogenase Family Member; Acyl-CoA Dehydrogenase Domain-Containing Protein
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MALTDQSTEIRSGEELDASLIDAYLKAHVPELHGTPTISQFPGGASNLTYLLQYPERELVLRRPPFGHKARSAHDMGREY RILNQLKEAFPYCPEAYLHCTDESLIGSEFYVMQRVKGIILRSDLPPELALDATQTEQLCKNFIDKMVDLHRVDYQACGL GDLGKPQGYVQRQISGWSERYEKALTPDAPAWEQVKRWLADKMPADSPTSSIVHNDYRFDNVILDPANPMHIIGVLDWEL TTLGDPLMDLGNTLAYWIQADDPAPVQLMRRQPSNAPGMLTRQAFVDYYAERAGVRIDNFDFYYTYGLFRLAGIVQQIYY RFFHGQTQDKRFAQFIHMNRLLEQMSLRVIEKTSL
Sequences:
>Translated_355_residues MALTDQSTEIRSGEELDASLIDAYLKAHVPELHGTPTISQFPGGASNLTYLLQYPERELVLRRPPFGHKARSAHDMGREY RILNQLKEAFPYCPEAYLHCTDESLIGSEFYVMQRVKGIILRSDLPPELALDATQTEQLCKNFIDKMVDLHRVDYQACGL GDLGKPQGYVQRQISGWSERYEKALTPDAPAWEQVKRWLADKMPADSPTSSIVHNDYRFDNVILDPANPMHIIGVLDWEL TTLGDPLMDLGNTLAYWIQADDPAPVQLMRRQPSNAPGMLTRQAFVDYYAERAGVRIDNFDFYYTYGLFRLAGIVQQIYY RFFHGQTQDKRFAQFIHMNRLLEQMSLRVIEKTSL >Mature_354_residues ALTDQSTEIRSGEELDASLIDAYLKAHVPELHGTPTISQFPGGASNLTYLLQYPERELVLRRPPFGHKARSAHDMGREYR ILNQLKEAFPYCPEAYLHCTDESLIGSEFYVMQRVKGIILRSDLPPELALDATQTEQLCKNFIDKMVDLHRVDYQACGLG DLGKPQGYVQRQISGWSERYEKALTPDAPAWEQVKRWLADKMPADSPTSSIVHNDYRFDNVILDPANPMHIIGVLDWELT TLGDPLMDLGNTLAYWIQADDPAPVQLMRRQPSNAPGMLTRQAFVDYYAERAGVRIDNFDFYYTYGLFRLAGIVQQIYYR FFHGQTQDKRFAQFIHMNRLLEQMSLRVIEKTSL
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI38505218, Length=353, Percent_Identity=30.8781869688385, Blast_Score=182, Evalue=4e-46, Organism=Homo sapiens, GI211971008, Length=305, Percent_Identity=33.1147540983607, Blast_Score=167, Evalue=1e-41, Organism=Homo sapiens, GI48976061, Length=305, Percent_Identity=33.1147540983607, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI17562446, Length=329, Percent_Identity=30.0911854103343, Blast_Score=140, Evalue=7e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40761; Mature: 40630
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTDQSTEIRSGEELDASLIDAYLKAHVPELHGTPTISQFPGGASNLTYLLQYPERELV CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCEEEEECCCHHEE LRRPPFGHKARSAHDMGREYRILNQLKEAFPYCPEAYLHCTDESLIGSEFYVMQRVKGII EECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHHHHHHHH LRSDLPPELALDATQTEQLCKNFIDKMVDLHRVDYQACGLGDLGKPQGYVQRQISGWSER CCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCHHHHHHHHHHHHHH YEKALTPDAPAWEQVKRWLADKMPADSPTSSIVHNDYRFDNVILDPANPMHIIGVLDWEL HHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCEEECCCCCEEEEEEECEEH TTLGDPLMDLGNTLAYWIQADDPAPVQLMRRQPSNAPGMLTRQAFVDYYAERAGVRIDNF HHCCCHHHHHCCCEEEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEECCC DFYYTYGLFRLAGIVQQIYYRFFHGQTQDKRFAQFIHMNRLLEQMSLRVIEKTSL CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ALTDQSTEIRSGEELDASLIDAYLKAHVPELHGTPTISQFPGGASNLTYLLQYPERELV CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCEEEEECCCHHEE LRRPPFGHKARSAHDMGREYRILNQLKEAFPYCPEAYLHCTDESLIGSEFYVMQRVKGII EECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHHHHHHHH LRSDLPPELALDATQTEQLCKNFIDKMVDLHRVDYQACGLGDLGKPQGYVQRQISGWSER CCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCHHHHHHHHHHHHHH YEKALTPDAPAWEQVKRWLADKMPADSPTSSIVHNDYRFDNVILDPANPMHIIGVLDWEL HHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCEEECCCCCEEEEEEECEEH TTLGDPLMDLGNTLAYWIQADDPAPVQLMRRQPSNAPGMLTRQAFVDYYAERAGVRIDNF HHCCCHHHHHCCCEEEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEECCC DFYYTYGLFRLAGIVQQIYYRFFHGQTQDKRFAQFIHMNRLLEQMSLRVIEKTSL CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA