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The map label for this gene is atoS [C]

Identifier: 66045686

GI number: 66045686

Start: 2837044

End: 2839074

Strand: Reverse

Name: atoS [C]

Synonym: Psyr_2450

Alternate gene names: 66045686

Gene position: 2839074-2837044 (Counterclockwise)

Preceding gene: 66045687

Following gene: 66045680

Centisome position: 46.59

GC content: 60.22

Gene sequence:

>2031_bases
TTGAGTACTCCAGGCCTGTCGTCAGAGCGCGCGATCATTCTCGCCCCACGCGGGCGGGACAGTCAGATCGCTCTGCGCAT
TCTCGACGAAGCGGGTTACCCGGCAACGGTAGCCCGTGATGTGTCCGAGCTGGTCAGAGAGTTGGGTATGGGGGCCGGCC
TGGCGATCATCGCTGACGAGGCACTGCGCAACGCAGATATGACCCCGTTGCTCGAACTCCTCGGTCGCCAGCCGCCCTGG
TCGGACTTGCCTATCGTCTTGCTGACCCATCACGGCGGACCGGATCACACCCCGCCTGCGCGCACGGGCAGCCTGCTGGG
TAACGTGACCTTTCTCGAACGCCCTTTCCATCCGGTGACGCTGGTCAGCCTGGTGATGACGGCAGTGCGCGGTCGAAGAC
GTCAGTATGAAGCCCGGGCACGCATGGAGGACCTGCACGAAAGCGAAGGCCGCCTGCAGAATGCACTGATGGCCGGCAGG
CTGGGCTCATGGGTACTGGAGGCGGAAGACCTCAAGCTGACCTGCTCGAACATCACCAAAAGTCACTACGGCCGCGACGA
GCAGAACACGCTCGACTACGACGACTGGCTGGCCGCCGTTTATTTCGAAGACCAGCCCAGAATGCAATCGGCGTTGCAGC
GCAGCCTGGACACCGGTGTCGACCTGATCATCGAGTACCGTAATGTCTGGCCGGACGGTTCGCTCAACTGGGTGGATGTA
CGCGCCCGCGCCACTCGCAGCAAGAACGGCATGGTCGGCTCACTGGCGGGCGTGACGTCTGACATCACCGAGCGCAAGCA
GGCCGAGTCGCAATTGCGTCGTCTCAACGAAACACTTGAGCAACAGGTTGAAGAGCGAACCTCGCAGCTGCGTCACAAAG
AGGAGATTCTCCGCCAGTCACAGAAAATGGAAGCGGTCGGCCAGTTGACCGGCGGGATTGCCCATGACTTCAACAACATG
CTGACCGGGATCATCGGCAGTCTGGAATTGATAAGGCGGCGGCTGGCACGTGGGCGCACTGAGGACCTGAACAGCCTTAT
TGACCTGGGTGTGACGTCGGCAAACCGCGCTGCCGCCCTGACCCATCGCCTGCTGGCCTTCTCACGGCGTCAGTCGCTGG
ACTCCAAGCCGGTCGAGATGAATCATCTGGTCAATGCCATGGACGAACTGCTGCAGCGCAGCGTCAACGAGAGCATTCAC
CTGCAGTTGCGTCTGGCACACGATCTTTGGACCGCAGAAGCCGACCCCAACCAACTGGAGAGTGCCCTGCTCAACCTGGT
GCTCAACGCCCGCGACGCCATGCCTGACGGTGGTACGCTGGTGGTCGAGACCTTCAATCAGCAACTGGACAGATCCTTCA
CCAATGCCCATGAGAACCTGTTGCCGGGTGACTATGTCGTACTGAGCGTCAGCGACAATGGCTGTGGCATGCCTGAGACT
GTCATCAGCCGCGCTTTCGACCCCTTCTTCACCACCAAACCCATCGGCCAGGGCACGGGCCTGGGTCTTTCGATGATTTA
CGGCTTCAGCAAACAATCGCATGGCCACGTCCTGATCAAGAGCGAGGTCGGCGTCGGCACTACCGTACAACTGTTTCTGC
CGCGCTTTAGCGGGATGGCGAACGAAACCGAGCAAAGCTTCCAGAGCAATGCGGTTTATGCCGAGAATGGCGAGACGGTG
TTGATCGTCGAAGACGACCCCGCCGTGCGGGCACTGGTCAGTGAAGTGCTCGGCGAGCTGGGCTACACGTTTATCGAGGC
TGGCGAAGCGACGGACGCCGTGCCGATCCTGGAATCCGGACGGCGCATCGATCTATTGATCAGCGATGTAGGCCTGCCAG
GCATGAACGGCAGGCAGCTGGCGGAAATCGCCAGGCAACTGCGACCGGAACTCAAGGTGCTGTTCATCACCGGTTATGCA
GAACATGCGGCGGTGCGCGGAGGTTTTCTGGACACAGGGATGCAATTGATCACCAAACCCTTTGCGTTCGATCACCTGAC
TTCAAAAGTACGGGAAATGATTGAAGCCTGA

Upstream 100 bases:

>100_bases
GATTGAAAATCGGCGAACCATTGCAGGCCTTTCAGGGCGTACTGCGCGGTGTGCCGTCGTACATGGGCGACAAGAAACCG
CTGCTTGAGGATGACGACCT

Downstream 100 bases:

>100_bases
GCAATGCTCAGGCTTCAGGTAGCGCAGACTTGTCCGGTTGCCCGCTCATTTACCATCAAGCCAGCAGCTTCTGAATCTGG
GTATGCAGGGTGTCCATGGT

Product: PAS

Products: NA

Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]

Number of amino acids: Translated: 676; Mature: 675

Protein sequence:

>676_residues
MSTPGLSSERAIILAPRGRDSQIALRILDEAGYPATVARDVSELVRELGMGAGLAIIADEALRNADMTPLLELLGRQPPW
SDLPIVLLTHHGGPDHTPPARTGSLLGNVTFLERPFHPVTLVSLVMTAVRGRRRQYEARARMEDLHESEGRLQNALMAGR
LGSWVLEAEDLKLTCSNITKSHYGRDEQNTLDYDDWLAAVYFEDQPRMQSALQRSLDTGVDLIIEYRNVWPDGSLNWVDV
RARATRSKNGMVGSLAGVTSDITERKQAESQLRRLNETLEQQVEERTSQLRHKEEILRQSQKMEAVGQLTGGIAHDFNNM
LTGIIGSLELIRRRLARGRTEDLNSLIDLGVTSANRAAALTHRLLAFSRRQSLDSKPVEMNHLVNAMDELLQRSVNESIH
LQLRLAHDLWTAEADPNQLESALLNLVLNARDAMPDGGTLVVETFNQQLDRSFTNAHENLLPGDYVVLSVSDNGCGMPET
VISRAFDPFFTTKPIGQGTGLGLSMIYGFSKQSHGHVLIKSEVGVGTTVQLFLPRFSGMANETEQSFQSNAVYAENGETV
LIVEDDPAVRALVSEVLGELGYTFIEAGEATDAVPILESGRRIDLLISDVGLPGMNGRQLAEIARQLRPELKVLFITGYA
EHAAVRGGFLDTGMQLITKPFAFDHLTSKVREMIEA

Sequences:

>Translated_676_residues
MSTPGLSSERAIILAPRGRDSQIALRILDEAGYPATVARDVSELVRELGMGAGLAIIADEALRNADMTPLLELLGRQPPW
SDLPIVLLTHHGGPDHTPPARTGSLLGNVTFLERPFHPVTLVSLVMTAVRGRRRQYEARARMEDLHESEGRLQNALMAGR
LGSWVLEAEDLKLTCSNITKSHYGRDEQNTLDYDDWLAAVYFEDQPRMQSALQRSLDTGVDLIIEYRNVWPDGSLNWVDV
RARATRSKNGMVGSLAGVTSDITERKQAESQLRRLNETLEQQVEERTSQLRHKEEILRQSQKMEAVGQLTGGIAHDFNNM
LTGIIGSLELIRRRLARGRTEDLNSLIDLGVTSANRAAALTHRLLAFSRRQSLDSKPVEMNHLVNAMDELLQRSVNESIH
LQLRLAHDLWTAEADPNQLESALLNLVLNARDAMPDGGTLVVETFNQQLDRSFTNAHENLLPGDYVVLSVSDNGCGMPET
VISRAFDPFFTTKPIGQGTGLGLSMIYGFSKQSHGHVLIKSEVGVGTTVQLFLPRFSGMANETEQSFQSNAVYAENGETV
LIVEDDPAVRALVSEVLGELGYTFIEAGEATDAVPILESGRRIDLLISDVGLPGMNGRQLAEIARQLRPELKVLFITGYA
EHAAVRGGFLDTGMQLITKPFAFDHLTSKVREMIEA
>Mature_675_residues
STPGLSSERAIILAPRGRDSQIALRILDEAGYPATVARDVSELVRELGMGAGLAIIADEALRNADMTPLLELLGRQPPWS
DLPIVLLTHHGGPDHTPPARTGSLLGNVTFLERPFHPVTLVSLVMTAVRGRRRQYEARARMEDLHESEGRLQNALMAGRL
GSWVLEAEDLKLTCSNITKSHYGRDEQNTLDYDDWLAAVYFEDQPRMQSALQRSLDTGVDLIIEYRNVWPDGSLNWVDVR
ARATRSKNGMVGSLAGVTSDITERKQAESQLRRLNETLEQQVEERTSQLRHKEEILRQSQKMEAVGQLTGGIAHDFNNML
TGIIGSLELIRRRLARGRTEDLNSLIDLGVTSANRAAALTHRLLAFSRRQSLDSKPVEMNHLVNAMDELLQRSVNESIHL
QLRLAHDLWTAEADPNQLESALLNLVLNARDAMPDGGTLVVETFNQQLDRSFTNAHENLLPGDYVVLSVSDNGCGMPETV
ISRAFDPFFTTKPIGQGTGLGLSMIYGFSKQSHGHVLIKSEVGVGTTVQLFLPRFSGMANETEQSFQSNAVYAENGETVL
IVEDDPAVRALVSEVLGELGYTFIEAGEATDAVPILESGRRIDLLISDVGLPGMNGRQLAEIARQLRPELKVLFITGYAE
HAAVRGGFLDTGMQLITKPFAFDHLTSKVREMIEA

Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=294, Percent_Identity=27.2108843537415, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1790436, Length=251, Percent_Identity=31.8725099601594, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI87081816, Length=385, Percent_Identity=24.4155844155844, Blast_Score=86, Evalue=7e-18,
Organism=Escherichia coli, GI48994928, Length=461, Percent_Identity=23.4273318872017, Blast_Score=80, Evalue=5e-16,
Organism=Escherichia coli, GI145693157, Length=271, Percent_Identity=26.1992619926199, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1788713, Length=269, Percent_Identity=26.0223048327138, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 74602; Mature: 74471

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPGLSSERAIILAPRGRDSQIALRILDEAGYPATVARDVSELVRELGMGAGLAIIADE
CCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEHH
ALRNADMTPLLELLGRQPPWSDLPIVLLTHHGGPDHTPPARTGSLLGNVTFLERPFHPVT
HHCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHCCCHHHCCCCCHHH
LVSLVMTAVRGRRRQYEARARMEDLHESEGRLQNALMAGRLGSWVLEAEDLKLTCSNITK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEHHHHHH
SHYGRDEQNTLDYDDWLAAVYFEDQPRMQSALQRSLDTGVDLIIEYRNVWPDGSLNWVDV
HHCCCCCCCCCCHHHHEEEEEECCCHHHHHHHHHHHHCCHHEEEEHHHCCCCCCCCEEEE
RARATRSKNGMVGSLAGVTSDITERKQAESQLRRLNETLEQQVEERTSQLRHKEEILRQS
HHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKMEAVGQLTGGIAHDFNNMLTGIIGSLELIRRRLARGRTEDLNSLIDLGVTSANRAAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHH
THRLLAFSRRQSLDSKPVEMNHLVNAMDELLQRSVNESIHLQLRLAHDLWTAEADPNQLE
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHCCCCCHHHHH
SALLNLVLNARDAMPDGGTLVVETFNQQLDRSFTNAHENLLPGDYVVLSVSDNGCGMPET
HHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHH
VISRAFDPFFTTKPIGQGTGLGLSMIYGFSKQSHGHVLIKSEVGVGTTVQLFLPRFSGMA
HHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCC
NETEQSFQSNAVYAENGETVLIVEDDPAVRALVSEVLGELGYTFIEAGEATDAVPILESG
CHHHHHHHCCCEEECCCCEEEEECCCHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHCC
RRIDLLISDVGLPGMNGRQLAEIARQLRPELKVLFITGYAEHAAVRGGFLDTGMQLITKP
CEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEECCHHHHHHCCCHHHHHHHHHHCC
FAFDHLTSKVREMIEA
HHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STPGLSSERAIILAPRGRDSQIALRILDEAGYPATVARDVSELVRELGMGAGLAIIADE
CCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEHH
ALRNADMTPLLELLGRQPPWSDLPIVLLTHHGGPDHTPPARTGSLLGNVTFLERPFHPVT
HHCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHCCCHHHCCCCCHHH
LVSLVMTAVRGRRRQYEARARMEDLHESEGRLQNALMAGRLGSWVLEAEDLKLTCSNITK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEHHHHHH
SHYGRDEQNTLDYDDWLAAVYFEDQPRMQSALQRSLDTGVDLIIEYRNVWPDGSLNWVDV
HHCCCCCCCCCCHHHHEEEEEECCCHHHHHHHHHHHHCCHHEEEEHHHCCCCCCCCEEEE
RARATRSKNGMVGSLAGVTSDITERKQAESQLRRLNETLEQQVEERTSQLRHKEEILRQS
HHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKMEAVGQLTGGIAHDFNNMLTGIIGSLELIRRRLARGRTEDLNSLIDLGVTSANRAAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHH
THRLLAFSRRQSLDSKPVEMNHLVNAMDELLQRSVNESIHLQLRLAHDLWTAEADPNQLE
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHCCCCCHHHHH
SALLNLVLNARDAMPDGGTLVVETFNQQLDRSFTNAHENLLPGDYVVLSVSDNGCGMPET
HHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHH
VISRAFDPFFTTKPIGQGTGLGLSMIYGFSKQSHGHVLIKSEVGVGTTVQLFLPRFSGMA
HHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCC
NETEQSFQSNAVYAENGETVLIVEDDPAVRALVSEVLGELGYTFIEAGEATDAVPILESG
CHHHHHHHCCCEEECCCCEEEEECCCHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHCC
RRIDLLISDVGLPGMNGRQLAEIARQLRPELKVLFITGYAEHAAVRGGFLDTGMQLITKP
CEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEECCHHHHHHCCCHHHHHHHHHHCC
FAFDHLTSKVREMIEA
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA